Pyrosequencing of prey DNA in reptile faeces: analysis of earthworm consumption by slow worms

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Molecular Ecology Resources

• Publication date

  2012-03-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/j.1755-0998.2011.03098.xPMID 22176947
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Molecular Diet Analysis of Two African Free-Tailed Bats (Molossidae) Using High Throughput Sequencing

  2011cited by this paper
• Influence of management practices on large herbivore diet—Case of European bison in Białowieża Primeval Forest (Poland)

  2011cited by this paper
• Molecular analysis of the trophic interactions of British reptiles

  2010cited by this paper
• Prey choice by carabid beetles feeding on an earthworm community analysed using species‐ and lineage‐specific PCR primers

  2010cited by this paper
• Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?

  2010influential reference
• Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces

  2009influential reference
• DNA evidence of whale sharks (Rhincodon typus) feeding on red crab (Gecarcoidea natalis) larvae at Christmas Island, Australia

  2009cited by this paper
• New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

  2009cited by this paper
• A method of obtaining dietary data for slow worms (Anguis fragilis) by means of non‐harmful cooling and results from a Danish population

  2009cited by this paper
• Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

  2009cited by this paper
• DNA barcoding for ecologists.

  2009cited by this paper
• The diet of the Slow Worm, Anguis f. fragilis LINNAEUS, 1758, in the Tarvisio Forest (Carnic Alps, NE Italy)

  2008cited by this paper
• The complete genome of an individual by massively parallel DNA sequencing

  2008cited by this paper
• Molecular analysis of predation: a review of best practice for DNA-based approaches.

  2008influential reference
• Digestive physiology of the Burmese python: broad regulation of integrated performance

  2008cited by this paper
• Opening a can of worms: unprecedented sympatric cryptic diversity within British lumbricid earthworms

  2008cited by this paper
• Earthworm communities in relation to tree diversity in a deciduous forest

  2007cited by this paper
• Studying Seabird Diet through Genetic Analysis of Faeces: A Case Study on Macaroni Penguins (Eudyptes chrysolophus)

  2007cited by this paper
• Quantitative analysis of prey DNA in pinniped faeces: potential to estimate diet composition?

  2007cited by this paper
• Inefficiency of mustard extraction technique for assessing size and structure of earthworm communities in UK pasture

  2006cited by this paper
• An Adapted Method for Sampling Earthworms at Night in Wildlife Studies

  2006cited by this paper
• Rapid screening of invertebrate predators for multiple prey DNA targets

  2005influential reference
• Molecular scatology as a tool to study diet: analysis of prey DNA in scats from captive Steller sea lions

  2005cited by this paper
• Genome sequencing in microfabricated high-density picolitre reactors

  2005cited by this paper
• DNA-based identification of salmonid prey species in seal faeces

  2005cited by this paper
• Group‐specific polymerase chain reaction for DNA‐based analysis of species diversity and identity in dietary samples

  2004cited by this paper
• Growth rate of Ailsa Craig slow-worms Anguis fragilis: prey preference and temperature effects

  2004cited by this paper
• Collembola as alternative prey sustaining spiders in arable ecosystems: prey detection within predators using molecular markers

  2003cited by this paper
• The correlation between rDNA copy number and genome size in eukaryotes.

  2003cited by this paper
• Molecular identification of prey in predator diets

  2002cited by this paper
• PHYLOGEOGRAPHIC HISTORY OF THE LAND SNAIL CANDIDULA UNIFASCIATA (HELICELLINAE, STYLOMMATOPHORA): FRAGMENTATION, CORRIDOR MIGRATION, AND SECONDARY CONTACT

  2002cited by this paper
• NOTA SOBRE LA ALIMENTACION DE PLEURODEMA BUFONINA BELL, 1843 (ANURA -- LEPTODACTYLIDAE)

  2002cited by this paper
• Soil Ecology

  2001cited by this paper
• The role of earthworms for assessment of sustainability and as bioindicators

  1999cited by this paper
• Bias in Template-to-Product Ratios in Multitemplate PCR

  1998cited by this paper
• DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

  1994cited by this paper
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

  1994influential reference
• Recovering evolutionary trees under a more realistic model of sequence evolution.

  1994influential reference
• The assessment of populations of soil-inhabiting invertebrates

  1991cited by this paper
• The ecology of the slow-worm (Anguis Fragilis L.) in Southern England

  1990cited by this paper
• Basic local alignment search tool.

  1990cited by this paper
• Genome sequencing

  1987cited by this paper
• Earthworms: Their Ecology and relationships with soils and land use: By K. E. Lee. Academic Press, Orlando, Florida. 1985. ISBN 0 12 44086005. Price: US $65·00/£55·00

  1986cited by this paper
• Earthworm Population Studies: a Comparison of Sampling Methods

  1955cited by this paper
• The Distribution and Population Density of Earthworms (Lumbricidae) in Scottish Pasture Fields

  1951cited by this paper

• Table for two: Diet composition differences of allopatric and sympatric populations of island geckos

  2025cites this paper
• Dietary adaptations along the northern limit of distribution: what does the smooth snake Coronella austriaca eat in Norway? Metabarcoding of stomach content and visual analysis of faeces

  2025cites this paper
• DNA metabarcoding confirms Copsychus saularis, the common insectivorous species in oil palm plantations as biological control of ground-dwelling insect pests

  2025cites this paper
• Metabarcoding reveals waterbird diet in a French Ramsar wetland: implications for ecosystem management

  2024cites this paper
• The Metabarcoding of Grubs: Traditional Herbal Medicine of Scarabaeidae Larvae.

  2024cites this paper
• DNA metabarcoding of cloacal swabs provides insight into diets of highly migratory sharks in the Mid-Atlantic Bight.

  2023cites this paper
• Diet of a threatened rattlesnake (eastern massasauga) revealed by DNA metabarcoding

  2023cites this paper
• Exploring the dietary niche of Atlantolacerta andreanskyi (Lacertidae) using DNA metabarcoding

  2023cites this paper
• DNA metabarcoding reveals evidence of inter- and intra-guild predation by Scylla paramamosain in a marine ecosystem

  2023cites this paper
• Molecular diet analysis of common cranes (Grus grus) under supplementary feeding based on fecal DNA metabarcoding

  2023cites this paper
• DNA High-Throughput Sequencing for Arthropod Gut Content Analysis to Evaluate Effectiveness and Safety of Biological Control Agents

  2022cites this paper
• A novel biological sources consistency evaluation method reveals high level of biodiversity within wild natural medicine: A case study of Amynthas earthworms as “Guang Dilong”

  2022cites this paper
• Species diversity analysis of commercial Mantidis Ootheca samples contaminated by store pests based on DNA metabarcoding

  2022cites this paper
• Comparison of morphological identification and DNA metabarcoding for dietary analysis of faeces from a subtropical lizard

  2022cites this paper
• Quantitative prey species detection in predator guts across multiple trophic levels by mapping unassembled shotgun reads

  2022cites this paper
• Comparison of Three Methods for Measuring Dietary Composition of Plains Hog-nosed Snakes

  2022cites this paper
• DNA metabarcoding quantifies the relative biomass of arthropod taxa in songbird diets: Validation with camera‐recorded diets

  2022cites this paper
• Biological composition analysis of a natural medicine, Faeces Vespertilionis, with complex sources using DNA metabarcoding

  2022cites this paper
• High-throughput sequencing reveals dietary segregation in Malaysian babblers

  2021cites this paper
• Diet diversity and environment determine the intestinal microbiome and bacterial pathogen load of fire salamanders

  2021cites this paper
• Molecular gut content analysis indicates the inter‐ and intra‐guild predation patterns of spiders in conventionally managed vegetable fields

  2021cites this paper
• The problem of omnivory: A synthesis on omnivory and DNA metabarcoding

  2021cites this paper
• A powerful long metabarcoding method for the determination of complex diets from faecal analysis of the European pond turtle (Emys orbicularis, L. 1758)

  2020cites this paper
• Barn Swallows Hirundo rustica in Peninsular Malaysia: urban winter roost counts after 50 years, and dietary segregation from house-farmed swiftlets Aerodramus sp

  2020cites this paper
• A Non-Invasive Technique for Tracking a Marine Predator (Phoca vitulina) Through Molecular Scat Analysis By

  2020cites this paper
• Questioning the proverb ‘more haste, less speed’: classic versus metabarcoding approaches for the diet study of a remote island endemic gecko

  2020cites this paper
• Earthworms for Eco-friendly Resource Efficient Agriculture

  2020cites this paper
• The feeding behaviour of the European pond turtle (Emys orbicularis, L. 1758) is not a threat for other endangered species

  2020cites this paper
• DNA metabarcoding successfully quantifies relative abundances of arthropod taxa in songbird diets: a validation study using camera-recorded diets

  2020influential citation
• High‐resolution multi‐marker DNA metabarcoding reveals sexual dietary differentiation in a bird with minor dimorphism

  2020cites this paper
• Metabarkodlama yaklaşımıyla Tuz Gölü, Türkiye mikroorganizmalarının belirlenmesi için bir pilot çalışma

  2020cites this paper
• Environmental DNA and metabarcoding for the study of amphibians and reptiles: species distribution, the microbiome, and much more

  2019cites this paper
• How important is aerial leaf litter for insectivorous birds foraging in a Malaysian tropical forest?

  2019cites this paper
• DNA metabarcoding in diet studies: Unveiling ecological aspects in aquatic and terrestrial ecosystems

  2019cites this paper
• What Is the Giant Wall Gecko Having for Dinner? Conservation Genetics for Guiding Reserve Management in Cabo Verde

  2018cites this paper
• Assessing Diet of the Rufous-Winged Philentoma (Philentoma pyrhoptera) in Lowland Tropical Forest using Next-Generation Sequencing

  2018cites this paper
• Herbivore-Diet Analysis Based on Illumina MiSeq Sequencing: The Potential Use of an ITS2-Barcoding Approach to Establish Qualitative and Quantitative Predictions of Diet Composition of Mongolian Sheep.

  2018cites this paper
• Metabarcoding analysis of endemic lizards' diet for guiding reserve management in Macaronesia Islands

  2018cites this paper
• MIGRATION PATTERNS, HABITAT USE, PREY ITEMS, AND HUNTER HARVEST OF LONG-TAILED DUCKS (Clangula hyemalis) THAT OVERWINTER ON LAKE MICHIGAN

  2018cites this paper
• Molecular gut content analysis of different spider body parts

  2018cites this paper
• Evaluating metabarcoding to analyse diet composition of species foraging in anthropogenic landscapes using Ion Torrent and Illumina sequencing

  2018cites this paper
• Fatty acid patterns of soil decomposers and predators as affected by plant species richness

  2018cites this paper
• El Niño and the structure of mutualistic and antagonistic bat food webs revealed by DNA barcoding

  2018cites this paper
• The effects of pastoral intensification on the feeding interactions of generalist predators in streams

  2017cites this paper
• Using DNA to explore predator diet in temperate marine ecosystems

  2017cites this paper
• Sympatric elasmobranchs and fecal samples provide insight into the trophic ecology of the smalltooth sawfish

  2017cites this paper
• DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea)

  2017cites this paper
• Diet of the Australian sea lion (Neophoca cinerea): an assessment of novel DNA-based and contemporary methods to determine prey consumption

  2017cites this paper
• Exploring Techniques to Investigate Mule Deer Diet Composition on the Navajo Nation

  2016cites this paper
• A field ornithologist's guide to genomics: Practical considerations for ecology and conservation

  2016cites this paper
• Learning ecological networks from next-generation sequencing data

  2016cites this paper
• Diet Analysis of Maumee River Fishes using Cytochrome C Oxidase (COI) DNA Metabarcoding ― Insights into a Critical Time of Year

  2016cites this paper
• Woodland restoration on landfill sites : earthworm activity and ecosystem service provision

  2016cites this paper
• Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material

  2016cites this paper
• Diet analysis of Pacific harbour seals (Phoca vitulina richardsi) using high-throughput DNA sequencing

  2015cites this paper
• Molecular analysis of faecal samples from birds to identify potential crop pests and useful biocontrol agents in natural areas.

  2015cites this paper
• Sexual dimorphism of tropical green pit viper Trimeresurus (Cryptelytrops) macrops in Northeast Thailand

  2015cites this paper
• How will the ‘molecular revolution’ contribute to biological recording?

  2015cites this paper
• Trophic requirements beyond foraging habitats: The importance of prey source habitats in bat conservation

  2015cites this paper
• Universal and blocking primer mismatches limit the use of high‐throughput DNA sequencing for the quantitative metabarcoding of arthropods

  2015cites this paper
• Detecting frogs as prey in the diets of introduced mammals: a comparison between morphological and DNA‐based diet analyses

  2015cites this paper
• Molecular assessment of predation by hoverflies (Diptera: Syrphidae) in Mediterranean lettuce crops.

  2015cites this paper
• Dining local: the microbial diet of a snail that grazes microbial communities is geographically structured.

  2015cites this paper
• Dietary competition between the alien Asian Musk Shrew (Suncus murinus) and a re‐introduced population of Telfair's Skink (Leiolopisma telfairii)

  2014cites this paper
• A pragmatic approach to the analysis of diets of generalist predators: the use of next‐generation sequencing with no blocking probes

  2014cites this paper
• Sex and age‐biased nematode prevalence in reptiles

  2014cites this paper
• Molecular assessment of wild Achatinella mustelina diet Final Report

  2014cites this paper
• Foraging Ecology of Shorebirds at a Stopover Site: Niche Dynamics, Aggression and Resource Use in

  2014cites this paper
• Detecting Frogs as Prey in the Diets of Introduced Mammals

  2014cites this paper
• Pyrosequencing of prey DNA in faeces of carnivorous land snails to facilitate ecological restoration and relocation programmes

  2014cites this paper
• Mitochondrial DNA and morphological variation in the sentinel earthworm species Lumbricus rubellus

  2014cites this paper
• Molecular analysis of the diets of snakes: changes in prey exploitation during development of the rare smooth snake Coronella austriaca

  2014cites this paper
• Protocols for metagenomic DNA extraction and Illumina amplicon library preparation for faecal and swab samples

  2014cites this paper
• Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification

  2013cites this paper
• DNA barcoding expands dietary identification and reveals dietary similarity in Jamaican frugivorous bats

  2013cites this paper
• Empirically Characterising Trophic Networks: What Emerging DNA-Based Methods, Stable Isotope and Fatty Acid Analyses Can Offer

  2013cites this paper
• Of contigs and quagmires: next‐generation sequencing pitfalls associated with transcriptomic studies

  2013cites this paper
• Quantifying sequence proportions in a DNA‐based diet study using Ion Torrent amplicon sequencing: which counts count?

  2013cites this paper
• Storage and shipping of tissue samples for DNA analyses: A case study on earthworms

  2013cites this paper
• Using Next-Generation Sequencing to Analyse the Diet of a Highly Endangered Land Snail (Powelliphanta augusta) Feeding on Endemic Earthworms

  2013cites this paper
• From Puffins to Plankton: A DNA-Based Analysis of a Seabird Food Chain in the Northern Gulf of Maine

  2013cites this paper
• Who is eating what: diet assessment using next generation sequencing

  2012cites this paper
• |SE|S|AM|E| Barcode: NGS‐oriented software for amplicon characterization – application to species and environmental barcoding

  2012influential citation
• Investigating the effects of riparian timber extraction on trophic 1 interactions of three Cyprynid Species from the the Kalabakan 2 Basin , Northern Borneo Using DNA Metabarcoding

  year unknowncites this paper
• Dietary competition between the alien Asian

  year unknowncites this paper
• Exploring the dietary niche of Atlantolacerta andreanskyi (Lacertidae) using DNA metabarcoding

  year unknowncites this paper