Theoretical–computational modelling of the electric field effects on protein unfolding thermodynamics

No abstract is available for this paper.

• Publication year

  2015

• Venue

  RSC Advances

• Publication date

  2015-11-09

• Fields of study

  Physics, Chemistry

• Identifiers
  DOI 10.1039/C5RA15605J
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Water response to intense electric fields: A molecular dynamics study

  2015cited by this paper
• Nanosecond electric pulses deprive zinc ions of carboxypeptidase G2.

  2015cited by this paper
• Considering effects of nanosecond pulsed electric fields on proteins.

  2015cited by this paper
• Communication: influence of nanosecond-pulsed electric fields on water and its subsequent relaxation: dipolar effects and debunking memory.

  2015cited by this paper
• Dipolar response and hydrogen-bond kinetics in liquid water in square-wave time-varying electric fields

  2014cited by this paper
• Effect of high exogenous electric pulses on protein conformation: myoglobin as a case study.

  2013cited by this paper
• Smart flexible planar electrodes for electrochemotherapy and biosensing

  2013cited by this paper
• Self-organization of progress across the century of physics

  2013cited by this paper
• Human aquaporin 4 gating dynamics under and after nanosecond-scale static and alternating electric-field impulses: a molecular dynamics study of field effects and relaxation.

  2013cited by this paper
• Translational and rotational diffusive motion in liquid water in square-wave time-varying electric fields

  2013cited by this paper
• Novel Passive Element Circuits for Microdosimetry of Nanosecond Pulsed Electric Fields

  2012cited by this paper
• Transient Features in Nanosecond Pulsed Electric Fields Differentially Modulate Mitochondria and Viability

  2012cited by this paper
• Technology and design of innovative flexible electrode for biomedical applications

  2011cited by this paper
• Modeling of chemical reactions in micelle: water-mediated keto-enol interconversion as a case study.

  2011cited by this paper
• A 10-$\Omega$ High-Voltage Nanosecond Pulse Generator

  2010cited by this paper
• A 3-D Microdosimetric Study on Blood Cells: A Permittivity Model of Cell Membrane and Stochastic Electromagnetic Analysis

  2010cited by this paper
• Critical temperature of secondary structural change of myoglobin in thermal denaturation up to 130 degrees C and effect of sodium dodecyl sulfate on the change.

  2010cited by this paper
• Plasma membrane permeabilization by 60‐ and 600‐ns electric pulses is determined by the absorbed dose

  2009cited by this paper
• Thermal denaturation of myoglobin in water--disaccharide matrixes: relation with the glass transition of the system.

  2009cited by this paper
• Thermodynamic model for the analysis of calorimetric data of oligomeric proteins.

  2008cited by this paper
• Experiment and mechanism research of SKOV3 cancer cell apoptosis induced by nanosecond pulsed electric field

  2008cited by this paper
• Temperature and pressure dependence of protein stability: The engineered fluorescein-binding lipocalin FluA shows an elliptic phase diagram

  2008cited by this paper
• Mixed Quantum-Classical Methods for Molecular Simulations of Biochemical Reactions With Microwave Fields: The Case Study of Myoglobin

  2008cited by this paper
• Statistical Mechanics of Nonequilibrium Liquids

  2008cited by this paper
• An extended dynamical hydration shell around proteins

  2007cited by this paper
• Nanosecond Pulsed Electric Fields: A New Stimulus to Activate Intracellular Signaling

  2005cited by this paper
• On the use of the quasi-Gaussian entropy theory in the study of simulated dilute solutions.

  2004cited by this paper
• Molecular Quantum Mechanics. 3rd edition

  2003cited by this paper
• Statistical mechanics and thermodynamics of magnetic and dielectric systems based on magnetization and polarization fluctuations: Application of the quasi-Gaussian entropy theory

  2002cited by this paper
• Increasing temperature accelerates protein unfolding without changing the pathway of unfolding.

  2002cited by this paper
• Statistical Mechanics and Thermodynamics of Simulated Ionic Solutions

  2002cited by this paper
• Revisiting volume changes in pressure-induced protein unfolding.

  2002cited by this paper
• Structural study on acid-induced unfolding intermediates of myoglobin by using UV resonance Raman scattering from tryptophan residues

  2001cited by this paper
• Statistical-Mechanical Approach to the Thermodynamic Functions in the Unfolding of Biomolecules

  2001cited by this paper
• Fast kinetics and mechanisms in protein folding.

  2000cited by this paper
• Effects of pH on the kinetic reaction

  2000cited by this paper
• Statistical thermodynamic treatment of conformational transitions of monomeric and oligomeric proteins

  1999cited by this paper
• Ewald summation for systems with slab geometry

  1999cited by this paper
• The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.

  1998cited by this paper
• Protein hydration and unfolding--insights from experimental partial specific volumes and unfolded protein models.

  1998cited by this paper
• Equilibrium NMR studies of unfolded and partially folded proteins

  1998cited by this paper
• Structural characterization of the pressure-denatured state and unfolding/refolding kinetics of staphylococcal nuclease by synchrotron small-angle X-ray scattering and Fourier-transform infrared spectroscopy.

  1998cited by this paper
• LINCS: A linear constraint solver for molecular simulations

  1997cited by this paper
• Acid-induced denaturation of myoglobin studied by time-resolved electrospray ionization mass spectrometry.

  1997cited by this paper
• Multiple intermediates and transition states during protein unfolding

  1997cited by this paper
• VMD: visual molecular dynamics.

  1996cited by this paper
• The GROMOS96 Manual and User Guide

  1996cited by this paper
• GROMACS: A message-passing parallel molecular dynamics implementation

  1995cited by this paper
• Extremely rapid protein folding in the absence of intermediates

  1995cited by this paper
• Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

  1993cited by this paper
• Protein stability: electrostatics and compact denatured states.

  1991cited by this paper
• Temperature dependence of the hydrophobic interaction in protein folding.

  1986cited by this paper
• Conformational stability and basal metabolic rate: Reexamination of the case of myoglobin

  1984cited by this paper
• Estimation of the free energy of stabilization of ribonuclease A, lysozyme, alpha-lactalbumin, and myoglobin.

  1982cited by this paper
• Interaction Models for Water in Relation to Protein Hydration

  1981cited by this paper
• Static Dielectric Constant of Water and Steam

  1980cited by this paper
• Determining globular protein stability: guanidine hydrochloride denaturation of myoglobin.

  1979cited by this paper
• Theoretical solid state physics

  1973cited by this paper
• Kinetics of conformation change of sperm-whale myoglobin. I. Folding and unfolding of metmyoglobin following pH jump.

  1972cited by this paper
• Reversible pressure--temperature denaturation of chymotrypsinogen.

  1971cited by this paper
• Molecular Quantum Mechanics

  1970cited by this paper
• Structural Stability and Solvent Denaturation of Myoglobin

  1969cited by this paper

• Electrochemistry in sensing of molecular interactions of proteins and their behavior in an electric field

  2023cites this paper
• Preventing the amyloid-beta peptides accumulation on the cell membrane by applying GHz electric fields: A molecular dynamic simulation.

  2023cites this paper
• Effects of Environmental and Electric Perturbations on the pKa of Thioredoxin Cysteine 35: A Computational Study

  2022cites this paper
• Molecular dynamics evidence for nonthermal effects of electric fields on pectin methylesterase activity.

  2021cites this paper
• Electric field effects on proteins - Novel perspectives on food and potential health implications.

  2020cites this paper
• Electroporation Mechanisms: The Role of Lipid Orientation in the Kinetics of Pore Formation*

  2020cites this paper
• Elucidating the Effect of Static Electric Field on Amyloid Beta 1-42 Supramolecular Assembly.

  2020cites this paper
• Molecular dynamics simulation of the nanosecond pulsed electric field effect on kinesin nanomotor

  2019cites this paper
• Nanosecond pulsed electric signals can affect electrostatic environment of proteins below the threshold of conformational effects: The case study of SOD1 with a molecular simulation study

  2019cites this paper
• Tubulin response to intense nanosecond-scale electric field in molecular dynamics simulation

  2019cites this paper
• Effects of an Electric Field on the Conformational Transition of the Protein: A Molecular Dynamics Simulation Study

  2019cites this paper
• Tubulin as a sensitive target of nanosecond-scale intense electric field: quantitative insights from molecular dynamics simulations

  2019cites this paper
• Nonlinear dynamics of dipoles in microwave electric field of a nanocoaxial tubular reactor

  2018cites this paper
• "Star" morphologies of charged nanodrops comprised of conformational isomers.

  2018cites this paper
• Magnetic Molecular Dynamics Simulations of A2A Receptor in Solution

  2018cites this paper
• Human aquaporin 4 gating dynamics under axially oriented electric-field impulses: A non-equilibrium molecular-dynamics study.

  2018cites this paper
• Electrofluid enhanced hydrolysis of maize starch and its impacts on physical properties

  2017cites this paper
• A statistical analytical model for hydrophilic electropore characterization: A comparison study

  2017cites this paper
• Geometrical Characterization of an Electropore from Water Positional Fluctuations

  2017cites this paper
• Human Aquaporin 4 Gating Dynamics under Perpendicularly-Oriented Electric-Field Impulses: A Molecular Dynamics Study

  2016cites this paper
• A theoretical study of the activation of nitromethane under applied electric fields

  2016cites this paper
• Structural plasticity of the Salmonella FliS flagellar export chaperone

  2016cites this paper