A. Hatzigeorgiou

Rebuttal letter to "The need for functional correlation in assessing peripheral and CNS immunity during EBV reactivation".
20260 citationsauthor #11
Machine learning models reveal microbial signatures in healthy human tissues, challenging the sterility of human organs
20251 citationsauthor #4
Bottlenecks in advancing and applying multiomic data integration—common data resources as rate-limiting drivers—the high-impact use case of atherosclerotic cardiovascular disease
20251 citationsauthor #17
Tissue-Specific MicroRNA Function: Integrating Target Prediction with Expression Data
20250 citationsauthor #4
Epstein-Barr virus reactivation is associated with altered immune cell profiles in peripheral blood and cerebrospinal fluid of treatment-naive multiple sclerosis patients.
20257 citationsauthor #11
Identification of nasopharyngeal microbial dysbiosis in COVID-19 patients by 16S rRNA gene sequencing
20251 citationsauthor #5
How microRNAs go awry in cancer: Exploring the underlying factors of miRNA dysregulation
20240 citationsauthor #3
Microbial signatures in human periodontal disease: a metatranscriptome meta-analysis
20246 citationsauthor #4
Leveraging Large Language Models for Information Extraction: Identifying microRNA - Gene Interactions in Biomedical Literature
20240 citationsauthor #6
D-sORF: Accurate Ab Initio Classification of Experimentally Detected Small Open Reading Frames (sORFs) Associated with Translational Machinery
20242 citationsauthor #4
Pathway analysis for functional characterization of microRNAs
20240 citationsauthor #1
Microorganisms inside healthy human organs, are the internal tissues sterile?
20240 citationsauthor #5
A Machine Learning algorithm for Predicting Translation Initiation Start Positions
20241 citationsauthor #4
Empagliflozin in Acute Myocardial Infarction Reduces No-Reflow and Preserves Cardiac Function by Preventing Endothelial Damage
202416 citationsauthor #23
FLASH Proton Radiation Therapy Mitigates Inflammatory and Fibrotic Pathways and Preserves Cardiac Function in a Preclinical Mouse Model of Radiation-Induced Heart Disease
202430 citationsauthor #11
Microglia regulate cortical remyelination via TNFR1-dependent phenotypic polarization.
20248 citationsauthor #10
The status of the human gene catalogue
202334 citationsauthor #9
Parkin Deficiency Suppresses Antigen Presentation to Promote Tumor Immune Evasion and Immunotherapy Resistance
20234 citationsauthor #15
The status of the human gene catalogue
202379 citationsauthor #9
FLASH Mechanisms Track MECHANISMS OF FLASH RADIOTHERAPY SPARING OF NORMAL TISSUE AS INFORMED BY RNA-SEQ TRANSCRIPTOME ANALYSES
20220 citationsauthor #6
Abstract 3304: Gene expression profiling of full-thickness skin after FLASH proton radiotherapy
20220 citationsauthor #7
Abstract 3178: A stromal integrated stress response activates perivascular cancer-associated fibroblasts to drive angiogenesis and tumor progression
20220 citationsauthor #17
Transcriptional Profiling of Leishmania infantum Infected Dendritic Cells: Insights into the Role of Immunometabolism in Host-Parasite Interaction
20226 citationsauthor #6
Retraction Note: AKT3-mediated IWS1 phosphorylation promotes the proliferation of EGFR-mutant lung adenocarcinomas through cell cycle-regulated U2AF2 RNA splicing
20220 citationsauthor #13
Association of miR-144 levels in the peripheral blood with COVID-19 severity and mortality
202213 citationsauthor #15
A stromal Integrated Stress Response activates perivascular cancer-associated fibroblasts to drive angiogenesis and tumour progression
2022139 citationsauthor #28
AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite
202211 citationsauthor #6
DeepTSS: multi-branch convolutional neural network for transcription start site identification from CAGE data
20224 citationsauthor #4
Reporting on the Role of miRNAs and Affected Pathways on the Molecular Backbone of Ovarian Insufficiency: A Systematic Review and Critical Analysis Mapping of Future Research
202112 citationsauthor #12
FLASH Proton Radiotherapy Spares Normal Epithelial and Mesenchymal Tissues While Preserving Sarcoma Response
2021132 citationsauthor #15
DIANA-miTED: a microRNA tissue expression database
202186 citationsauthor #5
RETRACTED ARTICLE: AKT3-mediated IWS1 phosphorylation promotes the proliferation of EGFR-mutant lung adenocarcinomas through cell cycle-regulated U2AF2 RNA splicing
202111 citationsauthor #13
Characterizing miRNA-lncRNA Interplay.
202168 citationsauthor #4
PlasmiR: A Manual Collection of Circulating microRNAs of Prognostic and Diagnostic Value
202110 citationsauthor #12
Abstract 3649: Alternative RNA splicing of U2AF2, induced by AKT3-phosphorylated IWS1, promotes tumor growth, by activating a CDCA5-pERK positive feedback loop
20200 citationsauthor #7
MicroRNA-934 is a novel primate-specific small non-coding RNA with neurogenic function during early development
202015 citationsauthor #5
Impact of Helicobacter pylori Infection and Its Major Virulence Factor CagA on DNA Damage Repair
202021 citationsauthor #6
DiS-TSS: An Annotation Agnostic Algorithm for TSS Identification
20201 citationsauthor #4
Abstract PO-011: IWS1 phosphorylation promotes tumor growth and predicts poor prognosis in EGFR mutant lung adenocarcinoma patients, through the epigenetic regulation of U2AF2 RNA splicing
20200 citationsauthor #11
DIANA-miRGen v4: indexing promoters and regulators for more than 1500 microRNAs
202022 citationsauthor #7
Front face synchronous fluorescence as a tool for the quality assurance of Greek milk
20206 citationsauthor #5
IWS1 phosphorylation promotes cell proliferation and predicts poor prognosis in EGFR mutant lung adenocarcinoma patients, through the cell cycle-regulated U2AF2 RNA splicing_images_depository
20201 citationsauthor #13
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases
2020317 citationsauthor #26
Peryton: a manual collection of experimentally supported microbe-disease associations
202043 citationsauthor #8
Phospho-IWS1-dependent U2AF2 splicing is cell-cycle-regulated, promotes proliferation and predicts poor prognosis of EGFR- mutant lung adenocarcinoma
20200 citationsauthor #14
An Integrated Stress Response Pathway activates Perivascular Cancer-Associated Fibroblasts to Drive Angiogenesis and Tumor Progression
20201 citationsauthor #22
DIANA-mAP: Analyzing miRNA from Raw NGS Data to Quantification
20209 citationsauthor #7
Manatee: detection and quantification of small non-coding RNAs from next-generation sequencing data
201919 citationsauthor #4
Transcriptome Analysis Identifies Immune Markers Related to Visceral Leishmaniasis Establishment in the Experimental Model of BALB/c Mice
201911 citationsauthor #5
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for the analysis of CAGE data
201917 citationsauthor #3
Author response: MicroRNA-934 is a novel primate-specific small non-coding RNA with neurogenic function during early development
20190 citationsauthor #5
DIANA-LncBase v3: indexing experimentally supported miRNA targets on non-coding transcripts
2019253 citationsauthor #8
Corrigendum: ''RNAcentral : a hub of information for non-coding RNA sequences'' [Nucleic acids research, 47 (2019) D1, p. D221-D229]
201924 citationsauthor #51
ECCB 2018: The 17th European Conference on Computational Biology
20181 citationsauthor #1
microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions
201833 citationsauthor #5
Identifying Pri-miRNA Transcription Start Sites.
20184 citationsauthor #3
RNAcentral: a hub of information for non-coding RNA sequences
2018276 citationsauthor #52
Functions
2018883 citationsauthor #15
RNAcentral: a hub of information for non-coding RNA sequences
201841 citationsauthor #53
A Poly(Lactic-co-Glycolic) Acid Nanovaccine Based on Chimeric Peptides from Different Leishmania infantum Proteins Induces Dendritic Cells Maturation and Promotes Peptide-Specific IFNγ-Producing CD8+ T Cells Essential for the Protection against Experimental Visceral Leishmaniasis
201774 citationsauthor #5
Functional Analysis of miRNAs Using the DIANA Tools Online Suite.
201757 citationsauthor #2
Regulation of arthritis by A to I RNA editing against microRNA-381
20170 citationsauthor #4
Defective synaptic connectivity and axonal neuropathology in a human iPSC-based model of familial Parkinson’s disease
2017126 citationsauthor #16
DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions
2017930 citationsauthor #13
Neuronal ELAVL proteins utilize AUF-1 as a co-partner to induce neuron-specific alternative splicing of APP
201729 citationsauthor #5
Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species
20172 citationsauthor #26
Computational Challenges and -omics Approaches for the Identification of microRNAs and Targets
20172 citationsauthor #6
Analyzing MiRNA-LncRNA Interactions.
2016759 citationsauthor #2
DIANA‐TarBase and DIANA Suite Tools: Studying Experimentally Supported microRNA Targets
201639 citationsauthor #3
A Positive Regulatory Loo p between a Wnt-Regulated Non-coding RNA and ASCL 2 Controls Intestinal Stem Cell Fate Graphical
20160 citationsauthor #6
The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species
2016150 citationsauthor #26
THU0028 Microrna-381 Ameliorates Arthritis by Controlling Functions of Fibroblast-like Synoviocytes, Which Are Affected by A To I RNA Editing
20160 citationsauthor #4
A Positive Regulatory Loop between a Wnt-Regulated Non-coding RNA and ASCL2 Controls Intestinal Stem Cell Fate.
201650 citationsauthor #6
DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data
201645 citationsauthor #11
Function of microRNA-381 for arthritis animal model
20160 citationsauthor #4
DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
201559 citationsauthor #11
Session III: Panel on Open Research Data and the Research Culture
20150 citationsauthor #3
DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts
2015602 citationsauthor #11
mirPub: a database for searching microRNA
20150 citationsauthor #6
TarMiner: automatic extraction of miRNA targets from literature
20152 citationsauthor #5
MirPub v2: Towards Ranking and Refining miRNA Publication Search Results
20150 citationsauthor #6
Databases and ontologies mirPub : a database for searching microRNA publications
20150 citationsauthor #6
DIANA-miRPath v3.0: deciphering microRNA function with experimental support
20151,552 citationsauthor #8
Bioinformatics and open research data
20150 citationsauthor #1
Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxia
2014155 citationsauthor #10
Publishing Diachronic Life Science Linked Data
20140 citationsauthor #3
mirPub: a database for searching microRNA publications
201425 citationsauthor #6
1106PPROGNOSIS AND TREATMENT BEYOND PROGRESSION TO BRAF INHIBITORS IN PATIENTS WITH BRAF-MUTATED METASTATIC MELANOMA.
20140 citationsauthor #7
RNAcentral: an international database of ncRNA sequences
2014120 citationsauthor #40
microTSS: accurate microRNA transcription start site identification reveals a significant number of divergent pri-miRNAs
201467 citationsauthor #7
MR-microT: a MapReduce-based MicroRNA target prediction method
201419 citationsauthor #5
DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions
2014748 citationsauthor #13
Differential microRNA Profiles and Their Functional Implications in Different Immunogenetic Subsets of Chronic Lymphocytic Leukemia
201355 citationsauthor #5
Online resources for miRNA analysis.
201367 citationsauthor #2
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows
20131,076 citationsauthor #9
Use of Mutagenesis, Genetic Mapping and Next Generation Transcriptomics to Investigate Insecticide Resistance Mechanisms
201231 citationsauthor #6
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways
2012537 citationsauthor #10
miRNA Regulons Associated with Synaptic Function
201243 citationsauthor #5
Identification of microRNA-221/222 and microRNA-323-3p association with rheumatoid arthritis via predictions using the human tumour necrosis factor transgenic mouse model
2012106 citationsauthor #7
TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction
20121 citationsauthor #5

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