H. Wolfson

PROFILE

Homepage
No homepage is listed.
ORCID
No ORCID is listed.
Affiliations
No affiliations are listed.
Aliases
Haim J. Wolfson, H J Wolfson, Haim J Wolfson, Haim Wolfson, H. J. Wolfson, H Wolfson
Publication record
210 papers · 20,402 citations · H-index 70

PAPERS

LocAlign: Local Protein Structural Alignment with Geometric Deep Learning
20260 citationsauthor #3
Funneling modulatory peptide design with generative models: Discovery and characterization of disruptors of calcineurin protein-protein interactions
20235 citationsauthor #7
EvoRator2: Predicting Site-specific Amino Acid Substitutions Based on Protein Structural Information Using Deep Learning.
20235 citationsauthor #4
Discriminating physiological from non‐physiological interfaces in structures of protein complexes: A community‐wide study
202319 citationsauthor #19
Reduced antigenicity of Omicron lowers host serologic response
20227 citationsauthor #4
Reduced B cell antigenicity of Omicron lowers host serologic response
202210 citationsauthor #4
Pep–Whisperer: Inhibitory peptide design
20229 citationsauthor #3
ScanNet: A Web Server for Structure-based Prediction of Protein Binding Sites with Geometric Deep Learning.
202212 citationsauthor #3
Memdock: An α-Helical Membrane Protein Docking Algorithm.
20214 citationsauthor #2
SegmA: Residue Segmentation of cryo-EM density maps
20210 citationsauthor #2
ScanNet: an interpretable geometric deep learning model for structure-based protein binding site prediction
2021205 citationsauthor #3
Modeling of Multimolecular Complexes.
202014 citationsauthor #2
Solving Jigsaw Puzzles Using a Robot
20200 citationsauthor #2
Design of Disruptors of the Hsp90–Cdc37 Interface
202016 citationsauthor #10
Graph Matching by “ Geodesic Hashing ” for the Alignment of Pseudoknoted RNA Secondary Structures
20190 citationsauthor #2
AAnchor: CNN guided detection of anchor amino acids in high resolution cryo-EM density maps
20188 citationsauthor #2
Augmented Geometry Representation enables Distinction of near native PPIs from decoys
20180 citationsauthor #2
SnapDock—template-based docking by Geometric Hashing
201713 citationsauthor #2
Protein-Peptide Interaction Design: PepCrawler and PinaColada.
20173 citationsauthor #2
Accelerating protein-protein complex validation by GPU based funnel generation
20160 citationsauthor #2
Frontiers in Medicinal Chemistry
201612 citationsauthor #79
PinaColada: peptide-inhibitor ant colony ad-hoc design algorithm
201626 citationsauthor #2
Memdock: an α-helical membrane protein docking algorithm
201639 citationsauthor #3
On curve matching
2015263 citationsauthor #1
DockStar: a novel ILP-based integrative method for structural modeling of multimolecular protein complexes
201511 citationsauthor #3
DockStar: A Novel ILP Based Integrative Method for Structural Modelling of Multimolecular Protein Complexes (Extended Abstract)
20151 citationsauthor #3
Blind prediction of interfacial water positions in CAPRI
201461 citationsauthor #50
Novel LIMK2 Inhibitor Blocks Panc-1 Tumor Growth in a mouse xenograft model
201432 citationsauthor #4
Protein‐Protein Interaction Modeling and Inhibition: The TAU Bioinfo3D Perspective
20130 citationsauthor #1
Conformational transitions in human translin enable nucleic acid binding
201312 citationsauthor #4
Structure‐based in silico identification of ubiquitin‐binding domains provides insights into the ALIX‐V:ubiquitin complex and retrovirus budding
201364 citationsauthor #11
Diameter-selective dispersion of carbon nanotubes by β-lactoglobulin whey protein.
201317 citationsauthor #5
Inhibiteurs de la lim kinase
20130 citationsauthor #2
Computer-Based Identification of a Novel LIMK1/2 Inhibitor that Synergizes with Salirasib to Destabilize the Actin Cytoskeleton
201247 citationsauthor #7
SymmRef: A flexible refinement method for symmetric multimers
201123 citationsauthor #3
Object recognition by affine invariant matching
2011321 citationsauthor #3
GOSSIP: a method for fast and accurate global alignment of protein structures
201110 citationsauthor #3
Symmetry-based self-assembled nanotubes constructed using native protein structures: the key role of flexible linkers.
20111 citationsauthor #3
PepCrawler: A Fast RRT-Like Algorithm for High-Resolution Refinement and Binding-Affinity Estimation of Peptide Inhibitors - (Abstract)
20111 citationsauthor #2
On recognition of 3-D objects from 2-D images
2011124 citationsauthor #3
3-D Curve Matching
20114 citationsauthor #1
MultiFit: a web server for fitting multiple protein structures into their electron microscopy density map
201133 citationsauthor #4
Protein structure prediction using a docking‐based hierarchical folding scheme
20114 citationsauthor #3
Inexact Graph Matching by "Geodesic Hashing" for the Alignment of Pseudoknoted RNA Secondary Structures
20111 citationsauthor #2
PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors
201185 citationsauthor #2
ParaDock: a flexible non-specific DNA—rigid protein docking algorithm
201136 citationsauthor #2
How Does the Reductase Help To Regulate the Catalytic Cycle of Cytochrome P450 3A4 Using the Conserved Water Channel?
201057 citationsauthor #3
FiberDock: a web server for flexible induced-fit backbone refinement in molecular docking
2010101 citationsauthor #3
FiberDock: Flexible induced‐fit backbone refinement in molecular docking
2010175 citationsauthor #3
Allosteric Regulation of Glycogen Synthase Kinase 3β: A Theoretical Study†
201038 citationsauthor #5
An integrated suite of fast docking algorithms
2010141 citationsauthor #6
Determining macromolecular assembly structures by molecular docking and fitting into an electron density map
201073 citationsauthor #3
Structural Determination of Macromolecular Machines Guided By Proteomics and Electron Microscopy
20100 citationsauthor #2
Inferential optimization for simultaneous fitting of multiple components into a CryoEM map of their assembly.
2009128 citationsauthor #4
Computational validation of protein nanotubes.
20096 citationsauthor #3
Theoretical Characterization of Substrate Access/Exit Channels in the Human Cytochrome P450 3A4 Enzyme: Involvement of Phenylalanine Residues in the Gating Mechanism
2009118 citationsauthor #3
HingeProt: Automated prediction of hinges in protein structures
2008225 citationsauthor #3
Self-assembly of fused homo-oligomers to create nanotubes.
20080 citationsauthor #3
Computational Approaches and Tools for Establishing Structural Models for Short Amyloid‐forming Peptides
20081 citationsauthor #5
MolAxis: Efficient and accurate identification of channels in macromolecules
2008133 citationsauthor #3
Prediction of interacting single-stranded RNA bases by protein-binding patterns.
200845 citationsauthor #4
Principles of flexible protein–protein docking
2008212 citationsauthor #4
FireDock: a web server for fast interaction refinement in molecular docking†
2008735 citationsauthor #5
Metabolic stereoselectivity of cytochrome P450 3A4 towards deoxypodophyllotoxin: In silico predictions and experimental validation.
200823 citationsauthor #7
Structural similarity of genetically interacting proteins
20086 citationsauthor #5
PharmaGist: a webserver for ligand-based pharmacophore detection
2008259 citationsauthor #5
RsiteDB: a database of protein binding pockets that interact with RNA nucleotide bases
200832 citationsauthor #3
Algorithms for multiple protein structure alignment and structure-derived multiple sequence alignment.
20084 citationsauthor #3
Protein structure fitting and refinement guided by cryo-EM density.
2008351 citationsauthor #4
Constructing templates for protein structure prediction by simulation of protein folding pathways
200810 citationsauthor #3
MultiBind and MAPPIS: webservers for multiple alignment of protein 3D-binding sites and their interactions
200894 citationsauthor #4
Bioconversion of deoxypodophyllotoxin into epipodophyllotoxin in E. coli using human cytochrome P450 3A4
200810 citationsauthor #9
MolAxis: a server for identification of channels in macromolecules
200865 citationsauthor #3
Analysis and classification of RNA tertiary structures.
200853 citationsauthor #4
QM/MM study of the active species of the human cytochrome P450 3A4, and the influence thereof of the multiple substrate binding.
200738 citationsauthor #4
EMatch: Discovery of High Resolution Structural Homologues of Protein Domains in Intermediate Resolution Cryo-EM Maps
200747 citationsauthor #5
Principles of nanostructure design with protein building blocks
200746 citationsauthor #5
Structural dynamics of the cooperative binding of organic molecules in the human cytochrome P450 3A4.
200742 citationsauthor #4
Determining the configuration of macromolecular assembly components based on cryoEM density fitting and pairwise geometric complementarity
20070 citationsauthor #4
Algorithms for Molecular Biology 12.1 Protein Structure Introduction 12.1.1 Background
20070 citationsauthor #1
Changing the charge distribution of beta-helical-based nanostructures can provide the conditions for charge transfer.
200711 citationsauthor #5
Spatial chemical conservation of hot spot interactions in protein-protein complexes
200772 citationsauthor #4
Folding funnels and conformational transitions via hinge-bending motions
200770 citationsauthor #4
FireDock: Fast interaction refinement in molecular docking
2007682 citationsauthor #3
Automatic prediction of protein interactions with large scale motion
200749 citationsauthor #3
Deterministic Pharmacophore Detection via Multiple Flexible Alignment of Drug-Like Molecules
200790 citationsauthor #5
A hierarchical protein folding scheme based on the building block folding model.
20073 citationsauthor #6
1 Pharmacophore Detection by Multiple Flexible Alignment of Drug-Like Molecules
20070 citationsauthor #5
Structure of a phosphoinositide 3-kinase alpha adaptor-binding domain (ABD) in a complex with the iSH2 domain from p85 alpha
20070 citationsauthor #8
The Multiple Common Point Set Problem and Its Application to Molecule Binding Pattern Detection
200669 citationsauthor #4
De novo tubular nanostructure design based on self-assembly of beta-helical protein motifs.
200627 citationsauthor #4
A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly
20064 citationsauthor #3
Concepts and schemes for the re-engineering of physical protein modules: generating nanodevices via targeted replacements with constrained amino acids
200611 citationsauthor #8
Interaction of c(60)-fullerene and carboxyfullerene with proteins: docking and binding site alignment.
2006115 citationsauthor #3
Correlated mutations: Advances and limitations. A study on fusion proteins and on the Cohesin‐Dockerin families
2006128 citationsauthor #2
EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies
200620 citationsauthor #4
The ARTS web server for aligning RNA tertiary structures
200651 citationsauthor #3
Approaching the CAPRI challenge with an efficient geometry‐based docking
200526 citationsauthor #6
Fibril modelling by sequence and structure conservation analysis combined with protein docking techniques: beta(2)-microglobulin amyloidosis.
20058 citationsauthor #3
MAPPIS: Multiple 3D Alignment of Protein-Protein Interfaces
200510 citationsauthor #4

TIMELINE

1977 120 citations

1987 2 citations

1988 1,172 citations

1989 82 citations

1990 704 citations

1991 474 citations

1992 249 citations

1993 199 citations

1994 974 citations

1995 489 citations

1996 388 citations

1997 1,089 citations

1998 298 citations

1999 239 citations

2000 30 citations

2001 595 citations

2002 1,098 citations

2003 835 citations

2004 1,452 citations

2005 3,698 citations

2006 425 citations

2007 1,150 citations

2008 2,258 citations

2009 252 citations

2010 585 citations

2011 643 citations

2012 47 citations

2013 93 citations

2014 93 citations

2015 275 citations

2016 77 citations

2017 16 citations

2018 8 citations

2019 0 citations

2020 30 citations

2021 209 citations

2022 38 citations

2023 29 citations

2026 0 citations

Unknown 0 citations

H. Wolfson

PROFILE

PAPERS

TIMELINE

COAUTHOR MAP

CONCEPT FOOTPRINT