Todd H. Oakley

Collective synchrony of mating signals modulated by ecological cues and social signals in bioluminescent sea fireflies
20238 citationsauthor #4
Similar enzymatic functions in distinct bioluminescence systems: evolutionary recruitment of sulfotransferases in ostracod light organs
20233 citationsauthor #6
Deep Diversity: Extensive Variation in the Components of Complex Visual Systems across Animals
202212 citationsauthor #4
Different phylogenomic methods support monophyly of enigmatic ‘Mesozoa’ (Dicyemida + Orthonectida, Lophotrochozoa)
202216 citationsauthor #4
Corrigendum: Expression of opsins of the box jellyfish Tripedalia cystophora reveals the first photopigment in cnidarian ocelli and supports the presence of photoisomerases
20220 citationsauthor #4
Expression of Opsins of the Box Jellyfish Tripedalia cystophora Reveals the First Photopigment in Cnidarian Ocelli and Supports the Presence of Photoisomerases
20225 citationsauthor #4
Decision letter: Characterization of cephalic and non-cephalic sensory cell types provides insight into joint photo- and mechanoreceptor evolution
20210 citationsauthor #1
Sexual Signals Persist over Deep Time: Ancient Co-option of Bioluminescence for Courtship Displays in Cypridinid Ostracods
202110 citationsauthor #10
Multi‐level convergence of complex traits and the evolution of bioluminescence
202065 citationsauthor #2
Rhetorical Minds
20204 citationsauthor #1
Selection, drift, and constraint in cypridinid luciferases and the diversification of bioluminescent signals in sea fireflies
202014 citationsauthor #14
Light modulated cnidocyte discharge predates the origins of eyes in Cnidaria
20209 citationsauthor #6
Molecular evolution of luciferase diversified bioluminescent signals in sea fireflies (Crustacea:Ostracoda:Cypridinidae)
20201 citationsauthor #14
Symbiotic organs shaped by distinct modes of genome evolution in cephalopods
201941 citationsauthor #8
Luciferase gene of a Caribbean fireworm (Syllidae) from Puerto Rico
201911 citationsauthor #4
21. A CRITIQUE OF EXPERIMENTAL PHYLOGENETICS
20190 citationsauthor #1
Light-induced stress as a primary evolutionary driver of eye origins.
201913 citationsauthor #2
Evolving witnesses of changing environments: An introduction to the 18th International Symposium on Ostracoda
20190 citationsauthor #1
Phenotypic evolution shaped by current enzyme function in the bioluminescent courtship signals of sea fireflies
201911 citationsauthor #6
Phylogenetic position of Alternochelata lizardensis Kornicker, 1982 within Rutidermatidae (Ostracoda: Myodocopida), with an investigation into its green coloration
20190 citationsauthor #5
Context‐dependent evolution of ostracod morphology along the ecogeographical gradient of ocean depth
201913 citationsauthor #3
Bioluminescent Signals
20193 citationsauthor #2
Supplementary Information Appendix for Symbiotic Organs Shaped by Distinct Modes of Genome Evolution in Cephalopods
201989 citationsauthor #8
Laboratory culture of the California Sea Firefly Vargula tsujii (Ostracoda: Cypridinidae): Developing a model system for the evolution of marine bioluminescence
201911 citationsauthor #10
Prolific Origination of Eyes in Cnidaria with Co-option of Non-visual Opsins.
201854 citationsauthor #5
Ecological Engineering Helps Maximize Function in Algal Oil Production
20186 citationsauthor #7
Collecting and processing marine ostracods
20179 citationsauthor #2
Furcation and fusion: The phylogenetics of evolutionary novelty.
201724 citationsauthor #1
The Genome Sizes of Ostracod Crustaceans Correlate with Body Size and Evolutionary History, but not Environment
201717 citationsauthor #3
The genome sizes of ostracod crustaceans correlate with body size and phylogeny
20171 citationsauthor #3
Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution
2017124 citationsauthor #9
Multimodal sensorimotor system in unicellular zoospores of a fungus
201719 citationsauthor #2
Novelty by Furcation and Fusion: How tree-like is evolution?
20170 citationsauthor #1
Ecological interactions and coexistence are predicted by gene expression similarity in freshwater green algae
201732 citationsauthor #6
Light modulated cnidocyte firing predates the evolution of eyes in Cnidaria (Metazoa)
20160 citationsauthor #5
High Rates of Species Accumulation in Animals with Bioluminescent Courtship Displays.
201667 citationsauthor #2
of Purine Crystals Create Sparkling Iridocytes
20160 citationsauthor #1
The last common ancestor of most bilaterian animals possessed at least 9 opsins
2016108 citationsauthor #7
Linking Insects with Crustacea : Comparative Physiology of the Pancrustacea Organized by
20150 citationsauthor #4
Further re-analyses looking for effects of phylogenetic diversity on community biomass and stability
201518 citationsauthor #4
Eye-independent, light-activated chromatophore expansion (LACE) and expression of phototransduction genes in the skin of Octopus bimaculoides
201598 citationsauthor #2
Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies
2015146 citationsauthor #3
A Transcriptomic Analysis of Cave, Surface, and Hybrid Isopod Crustaceans of the Species Asellus aquaticus
201534 citationsauthor #4
The Dynamic Evolutionary History of Pancrustacean Eyes and Opsins.
2015107 citationsauthor #2
Evolutionary relatedness does not predict competition and co-occurrence in natural or experimental communities of green algae
201535 citationsauthor #10
Opsins in Limulus eyes: characterization of three visible light-sensitive opsins unique to and co-expressed in median eye photoreceptors and a peropsin/RGR that is expressed in all eyes
201520 citationsauthor #7
Phylogenetic distance does not predict competition in green algal communities
201521 citationsauthor #3
Common Ancestry Is a Poor Predictor of Competitive Traits in Freshwater Green Algae
201524 citationsauthor #6
How complexity originates: The evolution of animal eyes
201564 citationsauthor #1
Predictable transcriptome evolution in the convergent and complex bioluminescent organs of squid
201478 citationsauthor #5
The shell-eyes of the chiton Acanthopleura granulata (Mollusca, Polyplacophora) use pheomelanin as a screening pigment
201434 citationsauthor #3
Eye-specification genes in the bacterial light organ of the bobtail squid Euprymna scolopes, and their expression in response to symbiont cues.
201430 citationsauthor #3
CELIA K. C. CHURCHILL, EMILY A. ELLIS, ALANNAH E. PIQUE & TODD H. OAKLEY (2014) Two new sympatric species of Eusarsiella (Ostracoda: Myodocopida: Sarsiellidae) from the Florida Keys with a morphological phylogeny of Sarsiellinae. Zootaxa, 3802 (4): 444-458.
20140 citationsauthor #4
Ocular and Extraocular Expression of Opsins in the Rhopalium of Tripedalia cystophora (Cnidaria: Cubozoa)
201432 citationsauthor #5
The family Hyalidae (Crustacea: Amphipoda: Talitroidea) from Korean waters. 1. Genus Ptilohyale Bousfield & Hendrycks, 2002.
20148 citationsauthor #4
Occurrence of Hemocyanin in Ostracod Crustaceans
20140 citationsauthor #3
The influence of phylogenetic relatedness on species interactions among freshwater green algae in a mesocosm experiment
201465 citationsauthor #5
Occurrence of Hemocyanin in Ostracod Crustaceans
201416 citationsauthor #3
The Comb Jelly Opsins and the Origins of Animal Phototransduction
201466 citationsauthor #3
Evolutionary history and the strength of species interactions: testing the phylogenetic limiting similarity hypothesis.
201465 citationsauthor #4
Faculty Opinions recommendation of Analysis of the opsin repertoire in the tardigrade Hypsibius dujardini provides insights into the evolution of opsin genes in panarthropoda.
20140 citationsauthor #1
Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms
201473 citationsauthor #18
Osiris: accessible and reproducible phylogenetic and phylogenomic analyses within the Galaxy workflow management system
201436 citationsauthor #1
Evasion of predators contributes to the maintenance of male eyes in sexually dimorphic Euphilomedes ostracods (Crustacea).
201326 citationsauthor #6
EvasionofPredatorsContributestotheMaintenanceofMaleEyesin Sexually Dimorphic Euphilomedesostracods (Crustacea)
20130 citationsauthor #6
Experimental evidence that evolutionary relatedness does not affect the ecological mechanisms of coexistence in freshwater green algae.
2013184 citationsauthor #3
TheEvolutionofComplexityintheVisualSystemsofStomatopods: Insights from Transcriptomics
20130 citationsauthor #6
Shared ancestry influences community stability by altering competitive interactions: evidence from a laboratory microcosm experiment using freshwater green algae
201316 citationsauthor #3
Phylotranscriptomics to bring the understudied into the fold: monophyletic ostracoda, fossil placement, and pancrustacean phylogeny.
2013236 citationsauthor #1
The evolution of complexity in the visual systems of stomatopods: insights from transcriptomics.
201345 citationsauthor #6
microcosm experiment using freshwater green algae competitive interactions : evidence from a laboratory Shared ancestry influences community stability by altering
20130 citationsauthor #3
Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae.
201395 citationsauthor #4
A multi-gene phylogeny of Cephalopoda supports convergent morphological evolution in association with multiple habitat shifts in the marine environment
2012112 citationsauthor #4
Cnidocyte discharge is regulated by light and opsin-mediated phototransduction
201286 citationsauthor #3
Dispersal between shallow and abyssal seas and evolutionary loss and regain of compound eyes in cylindroleberidid ostracods: conflicting conclusions from different comparative methods.
201242 citationsauthor #2
Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin
201291 citationsauthor #7
Cnidocyte discharge is regulated by light and opsin-mediated phototransduction
20121 citationsauthor #3
Title A multigene phylogeny of Cephalopoda supports convergent morphological evolution in association with multiple habitat shifts in the marine environment Permalink
20120 citationsauthor #4
Eye-specification Genes In Two Light-interacting Organs, The Eye And Light Organ Of The Squid Euprymna scolopes
20110 citationsauthor #3
The Ecoresponsive Genome of Daphnia pulex
20111,226 citationsauthor #6
Understanding the dermal light sense in the context of integrative photoreceptor cell biology
201159 citationsauthor #4
Key Transitions During Animal Phototransduction Evolution: Co-duplication as a Null Hypothesis for the Evolutionary Origins of Novel Traits
20102 citationsauthor #1
Evolutionary expansion and specialization of the PDZ domains.
201051 citationsauthor #5
The Evolution of Opsins
201012 citationsauthor #1
The evolution of phototransduction from an ancestral cyclic nucleotide gated pathway
201095 citationsauthor #3
Phylogenetic diversity metrics for ecological communities: integrating species richness, abundance and evolutionary history.
2010386 citationsauthor #6
The Amphimedon queenslandica genome and the evolution of animal complexity
20101,016 citationsauthor #17
Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach
201055 citationsauthor #8
Editorial Preface
20100 citationsauthor #1
Ontogeny of sexual dimorphism via tissue duplication in an ostracod (Crustacea)
200921 citationsauthor #2
Evidence for light perception in a bioluminescent organ
2009125 citationsauthor #3
Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity
2009665 citationsauthor #4
Type II Opsins: Evolutionary Origin by Internal Domain Duplication?
200835 citationsauthor #4
Genomics and the evolutionary origins of nervous system complexity.
200823 citationsauthor #1
Opening the “Black Box”: The Genetic and Biochemical Basis of Eye Evolution
200817 citationsauthor #1
Erratic rates of molecular evolution and incongruence of fossil and molecular divergence time estimates in Ostracoda (Crustacea).
200846 citationsauthor #2
Reconstructing ancestral genome content based on symmetrical best alignments and Dollo parsimony
200819 citationsauthor #3
Euphilomedes chupacabra (Ostracoda: Myodocopida: Philomedidae), a new demersal marine species from coastal Puerto Rico with male-biased vespertine swimming activity
200816 citationsauthor #4
Jay Hosler, An Evolutionary Novelty: Optical Allusions
20081 citationsauthor #1
Evolutionary history and the effect of biodiversity on plant productivity
2008611 citationsauthor #3

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