S. Kiełbasa

Comprehensive evaluation of smoking exposures and their interactions on DNA methylation
202428 citationsauthor #69
Phenotype prediction using biologically interpretable neural networks on multi-cohort multi-omics data
202415 citationsauthor #49
CaClust: linking genotype to transcriptional heterogeneity of follicular lymphoma using BCR and exomic variants
20243 citationsauthor #4
Correction: Inflammatory and tolerogenic myeloid cells determine outcome following human allergen challenge
20230 citationsauthor #7
Detection of Occurrent Somatic Hypermutation and Associated Gene Expression Profile in Single B Cells
20230 citationsauthor #5
Prostate-specific membrane antigen (PSMA) as a potential target for molecular imaging and treatment in bone and soft tissue sarcomas
202310 citationsauthor #4
Acquisition of a glycosylated B-cell receptor drives follicular lymphoma toward a dark zone phenotype
20236 citationsauthor #11
Cancer-Associated Fibroblasts Are Key Determinants of Cancer Cell Invasion in the Earliest Stage of Colorectal Cancer
202312 citationsauthor #6
B-Cell Receptor Function and Gene Expression Profiling at Single-Cell Level across the Spectrum from Normal to Neoplastic CD5-Positive B-Cell Compartments in Humans
20230 citationsauthor #6
Inflammatory and tolerogenic myeloid cells determine outcome following human allergen challenge
20237 citationsauthor #6
Single-cell immune profiling reveals thymus-seeding populations, T cell commitment, and multilineage development in the human thymus
202249 citationsauthor #5
Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS
202272 citationsauthor #131
Tumor‐expressed microRNAs associated with venous thromboembolism in colorectal cancer
202210 citationsauthor #4
Low-input Nucleus Isolation and Multiplexing with Barcoded Antibodies of Mouse Sympathetic Ganglia for Single-nucleus RNA Sequencing.
20222 citationsauthor #7
MDMX Regulates Transcriptional Activity of p53 and FOXO Proteins to Stimulate Proliferation of Melanoma Cells
20227 citationsauthor #6
Alternative Polyadenylation Utilization Results in Ribosome Assembly and mRNA Translation Deficiencies in a Model for Muscle Aging
20227 citationsauthor #8
Blood RNA signature RISK4LEP predicts leprosy years before clinical onset
202136 citationsauthor #2
Publisher Correction: Identification of 371 genetic variants for age at first sex and birth linked to externalising behavior
20210 citationsauthor #126
NKG2A is a late immune checkpoint on CD8 T cells and marks repeated stimulation and cell division
202143 citationsauthor #12
The Cortisol Response of Male and Female Choroidal Endothelial Cells: Implications for Central Serous Chorioretinopathy
202123 citationsauthor #3
"Snapshotting" Somatic Hypermutation in Single Follicular Lymphoma Cells
20210 citationsauthor #7
Identification of 371 genetic variants for age at first sex and birth linked to externalising behaviour
2021119 citationsauthor #126
Age-Associated Salivary MicroRNA Biomarkers for Oculopharyngeal Muscular Dystrophy
202012 citationsauthor #12
DOP85 The role of fibroblasts in the pathogenesis of Crohn’s disease-associated fistulas and in mesenchymal stem cell therapy
20200 citationsauthor #4
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells
202011 citationsauthor #2
Eleven grand challenges in single-cell data science
20201,100 citationsauthor #29
Proteo-transcriptomic profiling of nasal mononuclear phagocytic system cells in human controlled allergen challenge
20200 citationsauthor #5
Templated insertions at VD and DJ junctions create unique B‐cell receptors in the healthy B‐cell repertoire
20203 citationsauthor #8
Hippocampal glucocorticoid target genes associated with enhancement of memory consolidation
202027 citationsauthor #12
Refining Attention-Deficit/Hyperactivity Disorder and Autism Spectrum Disorder Genetic Loci by Integrating Summary Data From Genome-wide Association, Gene Expression, and DNA Methylation Studies.
202017 citationsauthor #119
Genome-wide analysis of constitutional DNA methylation in familial melanoma
20204 citationsauthor #22
Nasal systems immunology identifies inflammatory and tolerogenic myeloid cells that determine allergic outcome following challenge
20200 citationsauthor #5
Statistical method for modeling sequencing data from different technologies in longitudinal studies with application to Huntington disease
20200 citationsauthor #3
Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference
20201 citationsauthor #50
Optimized Whole Genome Association Scanning for Discovery of HLA Class I-Restricted Minor Histocompatibility Antigens
202010 citationsauthor #8
Comprehensive diagnostics of acute myeloid leukemia by whole transcriptome RNA sequencing
202091 citationsauthor #25
Correction for both common and rare cell types in blood is important to identify genes that correlate with age
20208 citationsauthor #52
Exacerbated inflammatory signaling underlies aberrant response to BMP9 in pulmonary arterial hypertension lung endothelial cells
202034 citationsauthor #10
Circulating micro RNAs reflecting ongoing osteoarthritis pathophysiology in cartilage as applicable biomarkers
20192 citationsauthor #12
Genome-wide identification of genes regulating DNA methylation using genetic anchors for causal inference
201930 citationsauthor #46
Title : Selective glucocorticoid receptor modulation prevents and reverses non-1 alcoholic fatty liver disease in male mice 2 Short title : Selective GR modulator reverses liver steatosis
20190 citationsauthor #12
PF262 COMPREHENSIVE DIAGNOSTICS OF ACUTE MYELOID LEUKEMIA BY WHOLE TRANSCRIPTOME RNA SEQUENCING
20190 citationsauthor #20
Deacetylation Inhibition Reverses PABPN1-Dependent Muscle Wasting
201915 citationsauthor #6
VprBP mitigates TGF-β and Activin signaling by promoting Smurf1-mediated type I receptor degradation
201916 citationsauthor #4
High-Throughput BCR Sequencing and Single-Cell Transcriptomics Reveal Distinct Transcriptional Profiles Associated with Subclonal Evolution of Follicular Lymphoma
20191 citationsauthor #10
12 Grand Challenges in Single-Cell Data Science
201912 citationsauthor #29
Epigenome-wide Association Study of Attention-Deficit/Hyperactivity Disorder Symptoms in Adults.
201934 citationsauthor #59
Acquired N-linked glycosylation motifs in B-cell receptors of primary cutaneous B-cell lymphoma and the normal B-cell repertoire.
201915 citationsauthor #4
Mendelian randomization integrating GWAS and eQTL data reveals genetic determinants of complex and clinical traits
2019280 citationsauthor #97
S890 NEW WHOLE GENOME ASSOCIATION SCANNING APPROACH FOR THE DISCOVERY OF HLA CLASS I-RESTRICTED MINOR HISTOCOMPATIBILITY ANTIGENS
20190 citationsauthor #8
A characterization of cis- and trans-heritability of RNA-Seq-based gene expression
201935 citationsauthor #63
Occupational exposure to gases/fumes and mineral dust affect DNA methylation levels of genes regulating expression
201913 citationsauthor #59
Peripheral IgE Repertoires of Healthy Donors Carry Moderate Mutation Loads and Do Not Overlap With Other Isotypes
201912 citationsauthor #6
DNA methylation signatures of educational attainment
201855 citationsauthor #53
RNA-Seq in 296 phased trios provides a high-resolution map of genomic imprinting
201827 citationsauthor #13
Skewed X-inactivation is common in the general female population
2018130 citationsauthor #60
A linear mixed-model approach to study multivariate gene–environment interactions
2018148 citationsauthor #53
A SNP panel for identification of DNA and RNA specimens
201847 citationsauthor #61
Impact of congenital cytomegalovirus infection on transcriptomes from archived dried blood spots in relation to long-term clinical outcome
20188 citationsauthor #3
Primary Cutaneous Follicle Center Lymphomas (PCFCL) Express Heavily Mutated B-Cell Receptors with Acquired N-Glycosylation Motifs and Lack Ongoing Somatic Hypermutation
20180 citationsauthor #5
Integrating omics datasets with the OmicsPLS package
201880 citationsauthor #6
Genes associated with venous thromboembolism in colorectal cancer patients
201829 citationsauthor #4
Brain Transcriptomic Analysis of Hereditary Cerebral Hemorrhage With Amyloidosis-Dutch Type
201818 citationsauthor #3
RNA‐seq analysis of Lgr6+ stem cells and identification of an Lgr6 isoform
20181 citationsauthor #5
Skewed X-inactivation is common in the general female population
2018130 citationsauthor #13
RNA sequencing data integration reveals an miRNA interactome of osteoarthritis cartilage
2018166 citationsauthor #12
The Effect of Corticosteroids on Human Choroidal Endothelial Cells: A Model to Study Central Serous Chorioretinopathy.
201828 citationsauthor #11
Transcriptional profiling and biomarker identification reveal tissue specific effects of expanded ataxin-3 in a spinocerebellar ataxia type 3 mouse model
201854 citationsauthor #7
Selective Glucocorticoid Receptor Modulation Prevents and Reverses Nonalcoholic Fatty Liver Disease in Male Mice
201852 citationsauthor #12
Whole Transcriptome RNA Sequencing As a Comprehensive Diagnostic Tool for Acute Myeloid Leukemia
20181 citationsauthor #20
Human Bone Marrow-Resident Natural Killer Cells Have a Unique Transcriptional Profile and Resemble Resident Memory CD8+ T Cells
201835 citationsauthor #4
The Mutation Landscape of Follicular Lymphoma and Chronic Lymphocytic Leukemia Reveals a Distinctive Frequency and Composition of Aid-Related Mutation Signatures
20172 citationsauthor #4
ARTISAN PCR: rapid identification of full‐length immunoglobulin rearrangements without primer binding bias
201726 citationsauthor #2
The interplay between genetics, the microbiome, DNA‐methylation & gene‐expression
20172 citationsauthor #21
BIOPET: Towards Scalable, Maintainable, User-Friendly, Robust and Flexible NGS Data Analysis Pipelines
20175 citationsauthor #2
Fusion Transcripts without Corresponding Cytogenetic Abnormalities in Acute Myeloid Leukemia: Implications for AML Pathogenesis
20172 citationsauthor #10
The distinct transcriptomes of slow and fast adult muscles are delineated by noncoding RNAs
201726 citationsauthor #4
Whole Transcriptome Sequencing (RNAseq) As a Comprehensive, Cost-Efficient Diagnostic Tool for Acute Myeloid Leukemia
20163 citationsauthor #13
Disease variants alter transcription factor levels and methylation of their binding sites
2016420 citationsauthor #20
Antigen-Independent, Autonomous B-Cell Receptor Signaling As a Dominant Candidate Oncogenic Mechanism in ABC DLBCL
20161 citationsauthor #11
Identification of context-dependent expression quantitative trait loci in whole blood
2016407 citationsauthor #16
New function of the myostatin/activin type I receptor (ALK4) as a mediator of muscle atrophy and muscle regeneration
201627 citationsauthor #6
Upregulation of 14q32 microRNAs in Human Subcutaneous Adipose Tissue of Patients with Critical Limb Ischemia at Risk of Major Amputation
20161 citationsauthor #4
Genetic and environmental influences interact with age and sex in shaping the human methylome
2016337 citationsauthor #54
Molecular signatures of age-associated chronic degeneration of shoulder muscles
20169 citationsauthor #8
Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression
201696 citationsauthor #13
Abstract LB-012: Autonomous, antigen-independent B-cell receptor signalling as a novel pathogenetic mechanism in non-GCB DLBCL
20161 citationsauthor #12
Integrated Whole Genome and Transcriptome Analysis Identified a Therapeutic Minor Histocompatibility Antigen in a Splice Variant of ITGB2
201616 citationsauthor #10
Primary Mediastinal Large B-Cell Lymphoma Exhibits Autonomous BCR Signaling and Responds to the Second Generation BTK Inhibitor Acalabrutinib
20162 citationsauthor #7
Selection patterns of B‐cell receptors and the natural history of follicular lymphoma
20167 citationsauthor #3
Whole-transcriptome analysis of flow-sorted cervical cancer samples reveals that B cell expressed TCL1A is correlated with improved survival
201515 citationsauthor #4
Integrated whole genome and transcriptome analysis identified a therapeutic minor histocompatibility antigen encoded by an alternative ITGB2 transcript
20150 citationsauthor #10
Hypothesis-free identification of modulators of genetic risk factors
201518 citationsauthor #16
Disease variants alter transcription factor levels and methylation of their binding sites
201517 citationsauthor #20
Improving Phenotypic Prediction by Combining Genetic and Epigenetic Associations
2015137 citationsauthor #62
Massive Parallel Sequencing of Full-Length B-Cell Receptor Sequences Reveals HLA-Dependent Shaping of the B-Cell Immune Repertoire
20141 citationsauthor #7
Two Plasmodium 6‐Cys family‐related proteins have distinct and critical roles in liver‐stage development
201485 citationsauthor #12
ISMB/ECCB 2013 Proceedings Papers Committee
20130 citationsauthor #31
The role of activation induced deaminase-mediated somatic hypermutation and subsequent subclone evolution for pathophysiology of follicular lymphomas
20130 citationsauthor #3
B-Cell Receptor Selection Pattern and Natural History Of Follicular Lymphoma
20130 citationsauthor #3

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