R. Albert

Dynamic model of carbon dioxide-induced stomatal closure reveals a feedback core for cellular decision-making
20230 citationsauthor #5
Predicting cascading extinctions and efficient restoration strategies in plant–pollinator networks via generalized positive feedback loops
20235 citationsauthor #3
Robustness of biomolecular networks suggests functional modules far from the edge of chaos
20231 citationsauthor #4
Inferring gene regulatory networks using transcriptional profiles as dynamical attractors
20233 citationsauthor #7
Structure-based approach to identify driver nodes in ensembles of biologically inspired Boolean networks
20235 citationsauthor #3
Boolean Networks as Predictive Models of Emergent Biological Behaviors
202315 citationsauthor #5
Inference of a Boolean Network From Causal Logic Implications
20225 citationsauthor #3
Leveraging network structure in nonlinear control
202212 citationsauthor #2
Whole community invasions and the integration of novel ecosystems
202215 citationsauthor #3
Structure-based approach to identifying small sets of driver nodes in biological networks.
202112 citationsauthor #3
Context-specific regulation of lysosomal lipolysis through network-level diverting of transcription factor interactions
202111 citationsauthor #3
ER+ Breast Cancer Strongly Depends on MCL-1 and BCL-xL Anti-Apoptotic Proteins
202124 citationsauthor #3
Detecting network anomalies using Forman–Ricci curvature and a case study for human brain networks
202131 citationsauthor #2
Data-Driven Math Model of FLT3-ITD Acute Myeloid Leukemia Reveals Potential Therapeutic Targets
202111 citationsauthor #4
pystablemotifs: Python library for attractor identification and control in Boolean networks
202128 citationsauthor #5
Relationships among generalized positive feedback loops determine possible community outcomes in plant-pollinator interaction networks.
20213 citationsauthor #4
Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies
202117 citationsauthor #8
Cell Line–Specific Network Models of ER+ Breast Cancer Identify Potential PI3Kα Inhibitor Resistance Mechanisms and Drug Combinations
202123 citationsauthor #11
synergy: a Python library for calculating, analyzing and visualizing drug combination synergy
202038 citationsauthor #2
Parity and time-reversal elucidate decisions in high-dimensional state space -- application to attractor scaling in critical Boolean networks
20204 citationsauthor #4
Network model and analysis of the spread of Covid-19 with social distancing
202040 citationsauthor #2
A Guard Cell Abscisic Acid (ABA) Network Model That Captures the Stomatal Resting State
202018 citationsauthor #3
Introduction to the Special Section on Network Science in Biological and Bio-Inspired Systems
20200 citationsauthor #3
Parity and time reversal elucidate both decision-making in empirical models and attractor scaling in critical Boolean networks
202049 citationsauthor #5
A Review of Two Network Curvature Measures
20203 citationsauthor #3
Cell-line-specific network models of ER+ breast cancer identify PI3Kα inhibitor sensitivity factors and drug combinations
20202 citationsauthor #11
Modeling of Molecular Networks
20192 citationsauthor #2
A survey of some tensor analysis techniques for biological systems
20198 citationsauthor #2
A feedback loop of conditionally stable circuits drives the cell cycle from checkpoint to checkpoint
201928 citationsauthor #4
Model-driven discovery of calcium-related protein-phosphatase inhibition in plant guard cell signaling
201922 citationsauthor #5
Abstract 675: Network modeling of drug resistance mechanisms and drug combinations in breast cancer
20191 citationsauthor #11
Model-dependent and model-independent control of biological network models
20190 citationsauthor #3
Experimental species introduction shapes network interactions in a plant-pollinator community
201915 citationsauthor #3
Edgetic perturbations to eliminate fixed-point attractors in Boolean regulatory networks.
201920 citationsauthor #2
Controlling the cell Cycle restriction Switch across the Information Gradient
20196 citationsauthor #2
Systems-level network modeling of Small Cell Lung Cancer subtypes identifies master regulators and destabilizers
201998 citationsauthor #6
Discrete dynamic network modeling of oncogenic signaling: Mechanistic insights for personalized treatment of cancer
201854 citationsauthor #3
Introduction to the Special Issue on Approaches to Control Biological and Biologically Inspired Networks
20182 citationsauthor #1
Towards control of cellular decision-making networks in the epithelial-to-mesenchymal transition
201841 citationsauthor #7
Identifying controllable and uncontrollable dynamical behavior in complex networks
20181 citationsauthor #2
Drug resistance mechanisms and combinatorial drug treatments in breast cancer: a network modeling approach
20180 citationsauthor #2
An Overview of Systems Biology
20180 citationsauthor #1
Target Control in Logical Models Using the Domain of Influence of Nodes
201847 citationsauthor #3
Faculty of 1000 evaluation for The Wisdom of Networks: A General Adaptation and Learning Mechanism of Complex Systems: The Network Core Triggers Fast Responses to Known Stimuli; Innovations Require the Slow Network Periphery and Are Encoded by Core-Remodeling.
20180 citationsauthor #1
Finding the Logic Backbone of a Boolean Network.
20180 citationsauthor #2
Self-sustaining positive feedback loops in discrete and continuous systems.
201811 citationsauthor #2
General method to find the attractors of discrete dynamic models of biological systems.
201822 citationsauthor #2
A network modeling approach to elucidate drug resistance mechanisms and predict combinatorial drug treatments in breast cancer
201754 citationsauthor #3
A framework to find the logic backbone of a biological network
201729 citationsauthor #2
A network modeling approach to elucidate drug resistance mechanisms and predict combinatorial drug treatments in breast cancer
20177 citationsauthor #3
Correlations in the degeneracy of structurally controllable topologies for networks
20175 citationsauthor #6
A new discrete dynamic model of ABA-induced stomatal closure predicts key feedback loops
201758 citationsauthor #1
Identifying (un)controllable dynamical behavior in complex networks
201725 citationsauthor #2
Structure-based control of complex networks with nonlinear dynamics
2016224 citationsauthor #3
Node-independent elementary signaling modes: A measure of redundancy in Boolean signaling transduction networks
20165 citationsauthor #2
A comparative study of qualitative and quantitative dynamic models of biological regulatory networks
201636 citationsauthor #2
Discrete Dynamic Modeling: A Network Approach for Systems Pharmacology
20166 citationsauthor #3
Compensatory interactions to stabilize multiple steady states or mitigate the effects of multiple deregulations in biological networks.
20164 citationsauthor #3
Top‐down network analysis characterizes hidden termite–termite interactions
20169 citationsauthor #8
Motif profile dynamics and transient species in a Boolean model of mutualistic ecological communities
20164 citationsauthor #4
Analysis of a dynamic model of guard cell signaling reveals the stability of signal propagation
201615 citationsauthor #2
Quantification of Regulation in Networks with Positive and Negative Interaction Weights
20160 citationsauthor #2
Combinatorial Interventions Inhibit the Epithelial-to-Mesenchymal Transition and Support Hybrid Cellular Phenotypes
20160 citationsauthor #6
A voxelwise approach to determine consensus regions-of-interest for the study of brain network plasticity
201515 citationsauthor #3
Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome
2015132 citationsauthor #5
Combinatorial interventions inhibit TGFβ-driven epithelial-to-mesenchymal transition and support hybrid cellular phenotypes
2015123 citationsauthor #6
Plant–pollinator community network response to species invasion depends on both invader and community characteristics
201520 citationsauthor #3
Restoration of plant–pollinator interaction networks via species translocation
201418 citationsauthor #4
Multi-level Modeling of Light-Induced Stomatal Opening Offers New Insights into Its Regulation by Drought
201469 citationsauthor #3
Cell Fate Reprogramming by Control of Intracellular Network Dynamics
2014202 citationsauthor #2
Integrated Systems and Technologies : Mathematical Oncology Network Modeling of TGF b Signaling in Hepatocellular Carcinoma Epithelial-to-Mesenchymal Transition Reveals Joint Sonic Hedgehog and Wnt Pathway Activation
2014154 citationsauthor #6
Boolean modeling: a logic‐based dynamic approach for understanding signaling and regulatory networks and for making useful predictions
2014139 citationsauthor #1
Border Control—A Membrane-Linked Interactome of Arabidopsis
2014208 citationsauthor #28
Comment on “Control profiles of complex networks”
201413 citationsauthor #3
Restoration of plant–pollinator interaction networks via species translocation
20140 citationsauthor #4
Topological implications of negative curvature for biological and social networks
201477 citationsauthor #1
Arabidopsis A Membrane-Linked Interactome of − − Border Control
20140 citationsauthor #28
Stabilization of perturbed Boolean network attractors through compensatory interactions
201465 citationsauthor #2
Boolean Models of Cellular Signaling Networks
20132 citationsauthor #2
Global versus local extinction in a network model of plant–pollinator communities
201319 citationsauthor #4
A Reduction Method for Boolean Network Models Proven to Conserve Attractors
201395 citationsauthor #2
Generating super-shedders: co-infection increases bacterial load and egg production of a gastrointestinal helminth
201396 citationsauthor #6
Global versus local extinction in a network model of plant–pollinator communities
20130 citationsauthor #4
Introduction to focus issue: quantitative approaches to genetic networks.
201330 citationsauthor #1
Abscisic Acid–Responsive Guard Cell Metabolomes of Arabidopsis Wild-Type and gpa1 G-Protein Mutants[C][W]
201375 citationsauthor #5
Minimal functional routes in directed graphs with dependent edges
20135 citationsauthor #3
Some Perspectives on Network Modeling in Therapeutic Target Prediction
20135 citationsauthor #1
An effective network reduction approach to find the dynamical repertoire of discrete dynamic networks.
2013139 citationsauthor #2
Effects of community structure on the dynamics of random threshold networks.
201322 citationsauthor #2
Transience and constancy of interactions in a plant‐frugivore network
201332 citationsauthor #2
Boolean modeling of biological regulatory networks: a methodology tutorial.
2013153 citationsauthor #2
Boolean modeling in systems biology: an overview of methodology and applications
2012459 citationsauthor #3
Networks in Motion
201261 citationsauthor #2
Abstract PR8: Network modeling of epithelial-to-mesenchymal transition in liver cancer metastasis
20120 citationsauthor #5
Topology of plant-pollinator networks that are vulnerable to collapse from species extinction.
201246 citationsauthor #4
Networks that govern communication , growth , herd behavior , and other key processes in nature and society are becoming increasingly amenable to modeling , forecast , and control
20120 citationsauthor #2
miR-200b restoration and DNA methyltransferase inhibitor block lung metastasis of mesenchymal-phenotype hepatocellular carcinoma
201239 citationsauthor #9
Network Model of Immune Responses Reveals Key Effectors to Single and Co-infection Dynamics by a Respiratory Bacterium and a Gastrointestinal Helminth
201255 citationsauthor #4
Discrete dynamic modeling of signal transduction networks.
201216 citationsauthor #2
Dynamic Network Modeling of Epithelial-to-Mesenchymal Transition Determines Snail1 as Critical Driver of Stemness in Liver Cancer
20110 citationsauthor #5

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