A Gene Expression Map for the Euchromatic Genome of Drosophila melanogaster

No abstract is available for this paper.

• Publication year

  2004

• Venue

  Science

• Publication date

  2004-10-22

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1126/SCIENCE.1101312PMID 15499012
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• [Oncogene].

  2019cited by this paper
• IL-13受体α2降低血吸虫病肉芽肿的炎症反应并延长宿主存活时间[英]/Mentink-Kane MM,Cheever AW，Thompson RW，et al//Proc Natl Acad Sci U S A

  2005cited by this paper
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• Genome-Wide Survey of Human Alternative Pre-mRNA Splicing with Exon Junction Microarrays

  2003cited by this paper
• Tissue-specific gene expression and ecdysone-regulated genomic networks in Drosophila.

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• Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome

  2003cited by this paper
• An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome

  2003cited by this paper
• The transcriptional activity of human Chromosome 22.

  2003cited by this paper
• Evolution of gene expression in the Drosophila melanogaster subgroup

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• Paucity of Genes on the Drosophila X Chromosome Showing Male-Biased Expression

  2003cited by this paper
• The UCSC Genome Browser Database

  2003cited by this paper
• Developmental genomic approaches in model organisms.

  2002cited by this paper
• Transcription activates repressed domains in the Drosophila bithorax complex.

  2002cited by this paper
• Large-Scale Transcriptional Activity in Chromosomes 21 and 22

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  2002cited by this paper
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  2002cited by this paper
• Genome-wide transcript profiles in aging and calorically restricted Drosophila melanogaster.

  2002cited by this paper
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  2002cited by this paper
• Gene expression analysis using oligonucleotide arrays produced by maskless photolithography.

  2002cited by this paper
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  2001cited by this paper
• Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experiments

  2001cited by this paper
• Experimental annotation of the human genome using microarray technology

  2001cited by this paper
• Ab initio gene finding in Drosophila genomic DNA.

  2000cited by this paper
• The genome sequence of Drosophila melanogaster.

  2000cited by this paper
• A Drosophila complementary DNA resource.

  2000cited by this paper
• Gene Ontology: tool for the unification of biology

  2000cited by this paper
• Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

  1999cited by this paper
• An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region.

  1999cited by this paper
• Microarray analysis of Drosophila development during metamorphosis.

  1999cited by this paper
• Prediction of complete gene structures in human genomic DNA.

  1997cited by this paper
• Development

  1996cited by this paper
• Novel transcripts from the Ultrabithorax domain of the bithorax complex.

  1987cited by this paper
• Domains of cis-interaction in the bithorax complex.

  1985cited by this paper
• Genetics

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• Statistical Methods for Research Workers

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  2017cites this paper
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  2017cites this paper
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  2017cites this paper
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  2017cites this paper
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  2017cites this paper
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  2015cites this paper
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  2015cites this paper
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  2015cites this paper
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  2014influential citation
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  2014cites this paper
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  2014cites this paper
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  2012cites this paper
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  2012cites this paper
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