RNA Degradation in Saccharomyces cerevisae

All RNA species in yeast cells are subject to turnover. Work over the past 20 years has defined degradation mechanisms for messenger RNAs, transfer RNAs, ribosomal RNAs, and noncoding RNAs. In addition, numerous quality control mechanisms that target aberrant RNAs have been identified. Generally, each decay mechanism contains factors that funnel RNA substrates to abundant exo- and/or endonucleases. Key issues for future work include determining the mechanisms that control the specificity of RNA degradation and how RNA degradation processes interact with translation, RNA transport, and other cellular processes.

• Publication year

  2012

• Venue

  Genetics

• Publication date

  2012-07-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1534/genetics.111.137265PMID 22785621PMCID 3389967
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• RNA degradation in yeast and human mitochondria.

  2012cited by this paper
• Scd6 targets eIF4G to repress translation: RGG motif proteins as a class of eIF4G-binding proteins.

  2012influential reference
• Decapping of long noncoding RNAs regulates inducible genes.

  2012influential reference
• Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae.

  2011cited by this paper
• Reconsidering movement of eukaryotic mRNAs between polysomes and P bodies.

  2011cited by this paper
• Genome-wide structure and organization of eukaryotic pre-initiation complexes

  2011cited by this paper
• The eukaryotic RNA exosome: Same scaffold but variable catalytic subunits

  2011cited by this paper
• XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast

  2011influential reference
• Different nuclease requirements for exosome-mediated degradation of normal and nonstop mRNAs

  2011influential reference
• Stm1 modulates translation after 80S formation in Saccharomyces cerevisiae.

  2011cited by this paper
• Promoter elements regulate cytoplasmic mRNA decay.

  2011cited by this paper
• Single-molecule mRNA decay measurements reveal promoter- regulated mRNA stability in yeast.

  2011cited by this paper
• The DExD/H box ATPase Dhh1 functions in translational repression, mRNA decay, and processing body dynamics

  2011cited by this paper
• The yeast rapid tRNA decay pathway primarily monitors the structural integrity of the acceptor and T-stems of mature tRNA.

  2011cited by this paper
• Copper tolerance of Saccharomyces cerevisiae nonsense-mediated mRNA decay mutants

  2011cited by this paper
• Mpk1 MAPK association with the Paf1 complex blocks Sen1-mediated premature transcription termination.

  2011cited by this paper
• Divergent RNA binding specificity of yeast Puf2p.

  2011cited by this paper
• Coupled 5' nucleotide recognition and processivity in Xrn1-mediated mRNA decay.

  2011cited by this paper
• A Role for the Poly(A)-binding Protein Pab1p in PUF Protein-mediated Repression*

  2011cited by this paper
• tRNAs Marked with CCACCA Are Targeted for Degradation

  2011cited by this paper
• Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2.

  2011influential reference
• Structure of the no-go mRNA decay complex Dom34–Hbs1 bound to a stalled 80S ribosome

  2011cited by this paper
• Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-Poly(A) Termination Pathway: Nrd1, Nab3, and Sen1

  2011cited by this paper
• Transcriptome Kinetics Is Governed by a Genome-Wide Coupling of mRNA Production and Degradation: A Role for RNA Pol II

  2011cited by this paper
• Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing.

  2011cited by this paper
• Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay

  2011cited by this paper
• The nuclear RNA polymerase II surveillance system targets polymerase III transcripts

  2011cited by this paper
• Rrp6, rrp47 and cofactors of the nuclear exosome.

  2011cited by this paper
• Dcp1 links coactivators of mRNA decapping to Dcp2 by proline recognition.

  2011cited by this paper
• Putatively Noncoding Transcripts Show Extensive Association with Ribosomes

  2011cited by this paper
• Dissociation by Pelota, Hbs1 and ABCE1 of mammalian vacant 80S ribosomes and stalled elongation complexes

  2011cited by this paper
• Proofreading and spellchecking: a two-tier strategy for pre-mRNA splicing quality control.

  2011cited by this paper
• The cAMP‐dependent protein kinase signaling pathway is a key regulator of P body foci formation

  2011influential reference
• Cryptic Transcription Mediates Repression of Subtelomeric Metal Homeostasis Genes

  2011cited by this paper
• The multifunctional Ccr4-Not complex directly promotes transcription elongation.

  2011cited by this paper
• Receptor for activated C kinase 1 stimulates nascent polypeptide‐dependent translation arrest

  2010cited by this paper
• Control of translation efficiency in yeast by codon-anticodon interactions.

  2010cited by this paper
• Spliceosome discards intermediates via the DEAH box ATPase Prp43p

  2010cited by this paper
• Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy

  2010cited by this paper
• A split active site couples cap recognition by Dcp2 to activation

  2010cited by this paper
• Nutrients and the Pkh1/2 and Pkc1 Protein Kinases Control mRNA Decay and P-body Assembly in Yeast*

  2010cited by this paper
• Decapping activators in Saccharomyces cerevisiae act by multiple mechanisms.

  2010influential reference
• PUF3 acceleration of deadenylation in vivo can operate independently of CCR4 activity, possibly involving effects on the PAB1-mRNP structure.

  2010cited by this paper
• Intragenic transcription of a noncoding RNA modulates expression of ASP3 in budding yeast.

  2010cited by this paper
• Identification of a quality control mechanism for mRNA 5’-end capping

  2010cited by this paper
• Role of a ribosome-associated E3 ubiquitin ligase in protein quality control

  2010cited by this paper
• Localization to, and Effects of Pbp1, Pbp4, Lsm12, Dhh1, and Pab1 on Stress Granules in Saccharomyces cerevisiae

  2010cited by this paper
• SF1 and SF2 helicases: family matters.

  2010cited by this paper
• Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors.

  2010cited by this paper
• Nonsense-mediated mRNA decay maintains translational fidelity by limiting magnesium uptake.

  2010cited by this paper
• Structural and Functional Insights into Saccharomyces cerevisiae Tpa1, a Putative Prolylhydroxylase Influencing Translation Termination and Transcription*

  2010cited by this paper
• Sphingolipids mediate formation of mRNA processing bodies during the heat-stress response of Saccharomyces cerevisiae.

  2010cited by this paper
• Stability control of MTL1 mRNA by the RNA-binding protein Khd1p in yeast.

  2010cited by this paper
• Endogenous ribosomal frameshift signals operate as mRNA destabilizing elements through at least two molecular pathways in yeast

  2010cited by this paper
• Dissection of Dom34–Hbs1 reveals independent functions in two RNA quality control pathways

  2010cited by this paper
• Structural and biochemical studies of the 5′→3′ exoribonuclease Xrn1

  2010cited by this paper
• Dom34:Hbs1 Promotes Subunit Dissociation and Peptidyl-tRNA Drop-Off to Initiate No-Go Decay

  2010cited by this paper
• Dcp2 phosphorylation by Ste20 modulates stress granule assembly and mRNA decay in Saccharomyces cerevisiae

  2010cited by this paper
• Initiation of the TORC1-regulated G0 program requires Igo1/2, which license specific mRNAs to evade degradation via the 5'-3' mRNA decay pathway.

  2010cited by this paper
• Structure of the Dom34–Hbs1 complex and implications for no-go decay

  2010cited by this paper
• Execution of the meiotic noncoding RNA expression program and the onset of gametogenesis in yeast require the conserved exosome subunit Rrp6

  2010cited by this paper
• The Genetic Landscape of a Cell

  2010influential reference
• Identification and Analysis of the Interaction between Edc3 and Dcp2 in Saccharomyces cerevisiae

  2010cited by this paper
• Comparative multiplexed mass spectrometric analyses of endogenously expressed yeast nuclear and cytoplasmic exosomes.

  2009cited by this paper
• Origins and activities of the eukaryotic exosome

  2009cited by this paper
• Stm1 Modulates mRNA Decay and Dhh1 Function in Saccharomyces cerevisiae

  2009influential reference
• Analysis of Dom34 and its function in no-go decay.

  2009influential reference
• Nonsense-mediated mRNA decay mutes the splicing defects of spliceosome component mutations.

  2009cited by this paper
• Related mechanisms for mRNA and rRNA quality control.

  2009cited by this paper
• Lsm1-7-Pat1 complex: A link between 3’ and 5’-ends in mRNA decay?

  2009cited by this paper
• Long 3′-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae

  2009cited by this paper
• Eukaryotic stress granules: the ins and outs of translation.

  2009cited by this paper
• Enhancer of decapping proteins 1 and 2 are important for translation during heat stress in Saccharomyces cerevisiae

  2009cited by this paper
• Structure and function of the 5’→3’ exoribonuclease Rat1 and its activating partner Rai1

  2009cited by this paper
• Unusual bipartite mode of interaction between the nonsense‐mediated decay factors, UPF1 and UPF2

  2009cited by this paper
• Bidirectional promoters generate pervasive transcription in yeast

  2009cited by this paper
• Co-translational mRNA decay in Saccharomyces cerevisiae

  2009cited by this paper
• Robust heat shock induces eIF2α-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae

  2009cited by this paper
• A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay.

  2009influential reference
• Widespread bidirectional promoters are the major source of cryptic transcripts in yeast

  2009cited by this paper
• Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex

  2009cited by this paper
• Distinct Roles of Non-Canonical Poly(A) Polymerases in RNA Metabolism

  2009cited by this paper
• Stressing out over tRNA cleavage.

  2009influential reference
• Hypusine-containing Protein eIF5A Promotes Translation Elongation

  2009cited by this paper
• Nascent Peptide-dependent Translation Arrest Leads to Not4p-mediated Protein Degradation by the Proteasome*

  2009cited by this paper
• The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation.

  2009cited by this paper
• LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels

  2009cited by this paper
• TRAMP Complex Enhances RNA Degradation by the Nuclear Exosome Component Rrp6*

  2009cited by this paper
• Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome

  2009cited by this paper
• Fail-Safe Transcriptional Termination for Protein-Coding Genes in S. cerevisiae

  2009cited by this paper
• A role for ubiquitin in the clearance of nonfunctional rRNAs.

  2009cited by this paper
• Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease

  2008cited by this paper
• Multifunctional deadenylase complexes diversify mRNA control

  2008cited by this paper
• S. cerevisiae Vts1p induces deadenylation-dependent transcript degradation and interacts with the Ccr4p-Pop2p-Not deadenylase complex.

  2008cited by this paper
• The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.

  2008cited by this paper
• A Yeast Exosome Cofactor, Mpp6, Functions in RNA Surveillance and in the Degradation of Noncoding RNA Transcripts

  2008cited by this paper
• Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation.

  2008cited by this paper
• Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes.

  2008cited by this paper
• Depurination of Brome Mosaic Virus RNA3 in Vivo Results in Translation-dependent Accelerated Degradation of the Viral RNA*

  2008cited by this paper
• Structure of Yeast Dom34

  2008cited by this paper

• mRNA Imprinting: transcription apparatus can remotely control cytoplasmic post-transcriptional mechanisms by dozens of proteins

  2026cites this paper
• Comprehensive analysis of Saccharomyces cerevisiae intron structures in vivo

  2025cites this paper
• Comparative analyses of disease-linked missense mutations in the RNA exosome modeled in budding yeast reveal distinct functional consequences in translation.

  2025cites this paper
• The ribosome as a platform to coordinate mRNA decay

  2025cites this paper
• Deciphering disordered regions controlling mRNA decay in high-throughput

  2025cites this paper
• Transcriptome-Wide Analysis of the 5' Cap Status of RNA Using 5' Monophosphate-Dependent Exonuclease Digestion and RNA Sequencing.

  2025cites this paper
• Poly(A) tail regulation in stem cells and early development

  2025cites this paper
• Global changes in synthesis rates and mRNA stabilities during adaptive responses to cell wall stress in yeast

  2025cites this paper
• The yeast checkpoint kinase Mec1p functions in transcription termination by facilitating recruitment of Pcf11p and regulating the torpedo exonuclease Rat1p

  2025cites this paper
• A kinetic ruler controls mRNA poly(A) tail length

  2025cites this paper
• Annotation and functional prediction of RNA helicases in Ustilago maydis

  2025influential citation
• Decapping activators Edc3 and Scd6 act redundantly with Dhh1 in post-transcriptional repression of starvation-induced pathways

  2025influential citation
• Long Noncoding RNAs Responding to Ethanol Stress in Yeast Seem Associated with Protein Synthesis and Membrane Integrity

  2025cites this paper
• The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay

  2024cites this paper
• Current insight into the role of mRNA decay pathways in fungal pathogenesis.

  2024cites this paper
• Comparison of Xrn1 and Rat1 5′ → 3′ exoribonucleases in budding yeast supports the specific role of Xrn1 in cotranslational mRNA decay

  2024cites this paper
• Defining the mechanisms and properties of post-transcriptional regulatory disordered regions by high-throughput functional profiling

  2024cites this paper
• Roles of Pbp1, Mkt1, and Dhh1 in the regulation of gene expression in the medium containing non‐fermentative carbon sources

  2024influential citation
• Genome-wide analysis of the NYN domain gene family in Brassica napus and its function role in plant growth and development.

  2024cites this paper
• Decapping activators Edc3 and Scd6 act redundantly with Dhh1 in post-transcriptional repression of starvation-induced pathways

  2024cites this paper
• RNA 3′end tailing safeguards cells against products of pervasive transcription termination

  2024cites this paper
• The ATP-dependent DEAD-box RNA Helicase Dbp2 regulates the glucose/nitrogen stress response in baker's yeast by modulating reversible nuclear retention and decay of SKS1 mRNA.

  2024cites this paper
• Uridylation regulates mRNA decay directionality in fission yeast

  2024cites this paper
• mRNA decapping activator Pat1 is required for efficient yeast adaptive transcriptional responses via the Cell Wall Integrity MAPK pathway.

  2024cites this paper
• Comparative analyses of disease-linked missense mutations in the RNA exosome modeled in budding yeast reveal distinct functional consequences in translation

  2023cites this paper
• Yeast Puf3p‐mediated mRNA decay is regulated by carbon source‐specific differential interaction of Puf3p with Pop2p and Yak1p

  2023cites this paper
• Hydroxyurea and inactivation of checkpoint kinase MEC1 inhibit transcription termination and pre-mRNA cleavage at polyadenylation sites in budding yeast

  2023cites this paper
• Xrn1 biochemically associates with eisosome proteins after the post diauxic shift in yeast

  2023cites this paper
• The ribosome quality control factor Asc1 determines the fate of HSP70 mRNA on and off the ribosome

  2023cites this paper
• Decapping factor Dcp2 controls mRNA abundance and translation to adjust metabolism and filamentation to nutrient availability

  2023cites this paper
• Xrn1 biochemically associates to the eisosome after the post diauxic shift in yeast

  2023cites this paper
• Decapping factor Dcp2 controls mRNA abundance and translation to adjust metabolism and filamentation to nutrient availability

  2023cites this paper
• The identification of conserved sequence features of co‐translationally decayed mRNAs and upstream open reading frames in angiosperm transcriptomes

  2023cites this paper
• DNA topoisomerase 2-associated proteins PATL1 and PATL2 regulate the biogenesis of hERG K+ channels

  2023cites this paper
• In vivo characterization of the critical interaction between the RNA exosome and the essential RNA helicase Mtr4 in Saccharomyces cerevisiae

  2023cites this paper
• The Sequential Recruitments of Rab-GTPase Ypt1p and the NNS Complex onto pre-HAC1 mRNA Promote Its Nuclear Degradation in Baker’s Yeast

  2023cites this paper
• Pervasive mRNA uridylation in fission yeast is catalysed by both Cid1 and Cid16 terminal uridyltransferases

  2023cites this paper
• Translation is a key determinant controlling the fate of cytoplasmic long non-coding RNAs

  2023cites this paper
• PELOTA and HBS1 suppress co‐translational messenger RNA decay in Arabidopsis

  2023cites this paper
• mRNA decapping activators Pat1 and Dhh1 regulate transcript abundance and translation to tune cellular responses to nutrient availability.

  2023cites this paper
• Short poly(A) tails are protected from deadenylation by the LARP1–PABP complex

  2023cites this paper
• RRM1 and PAB domains of translation initiation factor eIF4G (Tif4631p) play a crucial role in the nuclear degradation of export‐defective mRNAs in Saccharomyces cerevisiae

  2023cites this paper
• Methods for detecting RNA degradation intermediates in plants.

  2022cites this paper
• A compensatory link between cleavage/polyadenylation and mRNA turnover regulates steady-state mRNA levels in yeast

  2022cites this paper
• Factors regulating translation coupled mRNA degradation in yeast

  2022cites this paper
• Pervasive mRNA uridylation in fission yeast catalysed by both Cid1 and Cid16 terminal uridyltransferases

  2022cites this paper
• Post-transcriptional control of fungal cell wall synthesis

  2022influential citation
• Regulation of CLB6 expression by the cytoplasmic deadenylase Ccr4 through its coding and 3’ UTR regions

  2022cites this paper
• Lost in Translation: Exploring microRNA Biogenesis and Messenger RNA Fate in Anoxia-Tolerant Turtles

  2022cites this paper
• RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and a novel mRNA decay pathway

  2022cites this paper
• Nonsense-mediated mRNA decay and metal ion homeostasis and detoxification in Saccharomyces cerevisiae

  2022cites this paper
• Eukaryotic mRNA decapping factors: molecular mechanisms and activity

  2022cites this paper
• The ribosome quality control factors Asc1 and Hel2 regulate the expression of HSP70 during heat shock and recovery

  2022cites this paper
• Birth of a poly(A) tail: mechanisms and control of mRNA polyadenylation

  2022cites this paper
• Quantitative reconstitution of yeast RNA processing bodies

  2022cites this paper
• The Rab GTPase Ypt1p governs the activation of Unfolded Protein Response (UPR) in Saccharomyces cerevisiae by promoting the preferential nuclear degradation of pre-HAC1 mRNA

  2022cites this paper
• A dual-activity topoisomerase complex regulates mRNA translation and turnover.

  2022cites this paper
• The RNA-binding protein Puf5 and the HMGB protein Ixr1 contribute to cell cycle progression through the regulation of cell cycle-specific expression of CLB1 in Saccharomyces cerevisiae

  2022cites this paper
• Chaperone-Directed Ribosome Repair after Oxidative Damage

  2022cites this paper
• Synthetic genome rearrangement reveals dynamics of chromosome evolution shaped by hierarchical chromatin organization

  2022cites this paper
• In vivo Characterization of the Critical Interaction between the RNA Exosome and the Essential RNA Helicase Mtr4 in Saccharomyces cerevisiae

  2022cites this paper
• Bidirectional roles of the Ccr4-Not complex in regulating autophagy before and after nitrogen starvation

  2022cites this paper
• Decoupling of degradation from deadenylation reshapes poly(A) tail length in yeast meiosis

  2021cites this paper
• Combinations of slow-translating codon clusters can increase mRNA half-life in Saccharomyces cerevisiae

  2021cites this paper
• Alternative RNA degradation pathways by the exonuclease Pop2p from Saccharomyces cerevisiae

  2021cites this paper
• The Plasmodium NOT1-G paralogue is an essential regulator of sexual stage maturation and parasite transmission

  2021cites this paper
• Using quantitative reconstitution to investigate multicomponent condensates

  2021cites this paper
• Dcp2 C-terminal cis-binding elements control selective targeting of the decapping enzyme by forming distinct decapping complexes

  2021cites this paper
• Transcription feedback dynamics in the wake of cytoplasmic mRNA degradation shutdown

  2021cites this paper
• Replication stress inhibits synthesis of histone mRNAs in yeast by removing Spt10p and Spt21p from the histone promoters

  2021influential citation
• RNA Metabolism Guided by RNA Modifications: The Role of SMUG1 in rRNA Quality Control

  2021cites this paper
• Dedicated chaperones coordinate co-translational regulation of ribosomal protein production with ribosome assembly to preserve proteostasis

  2021influential citation
• Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae

  2021cites this paper
• Three-layered control of mRNA poly(A) tail synthesis in Saccharomyces cerevisiae

  2021influential citation
• The mRNA decapping complex is buffered by nuclear localization.

  2021cites this paper
• The ethanol tolerance in Saccharomyces cerevisiae under a phenomics perspective

  2021influential citation
• Feature selection for RNA cleavage efficiency at specific sites using the LASSO regression model in Arabidopsis thaliana

  2021cites this paper
• Surveying the global landscape of post-transcriptional regulators

  2021influential citation
• From Yeast to Mammals, the Nonsense-Mediated mRNA Decay as a Master Regulator of Long Non-Coding RNAs Functional Trajectory

  2021cites this paper
• Pbp1, the yeast ortholog of human Ataxin-2, functions in the cell growth on non-fermentable carbon sources

  2021cites this paper
• The Plasmodium NOT1-G Paralogue Acts as an Essential Nexus for Sexual Stage Maturation and Parasite Transmission

  2021cites this paper
• G3BPs in Plant Stress

  2021cites this paper
• RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and initiates a novel mRNA decay pathway

  2021cites this paper
• Pbp1 mediates the aberrant expression of genes involved in growth defect of ccr4∆ and pop2∆ mutants in yeast Saccharomyces cerevisiae

  2021influential citation
• The eIF4E-binding protein Eap1 has similar but independent roles in cell growth and gene expression with the cytoplasmic deadenylase Ccr4.

  2021cites this paper
• The CTEXT complex in Saccharomyces cerevisiae plays a crucial role in degrading distinct sets of aberrant mRNAs by the nuclear exosome

  2021cites this paper
• Pan2-Pan3 complex, together with Ccr4-Not complex, has a role in the cell growth on non-fermentable carbon sources.

  2021cites this paper
• Degradation intermediates as an indicator of mRNA and cell metabolism

  2021cites this paper
• Comparative analysis of RNA enrichment methods for preparation of Cryptococcus neoformans RNA sequencing libraries

  2021cites this paper
• Ribosome states signal RNA quality control.

  2021cites this paper
• Biological implications of decapping: beyond bulk mRNA decay

  2021cites this paper
• Accumulation of Mitochondrial RPPH1 RNA Is Associated with Cellular Senescence

  2021cites this paper
• Sequence features around cleavage sites are highly conserved among different species and a critical determinant for RNA cleavage position across eukaryotes

  2021cites this paper
• Dynamics of synthetic yeast chromosome evolution shaped by hierarchical chromatin organization

  2021cites this paper
• A budding yeast model for human disease mutations in the EXOSC2 cap subunit of the RNA exosome complex

  2020cites this paper
• Improved computational analysis of ribosome dynamics from 5′P degradome data using fivepseq

  2020cites this paper
• The Nrd1p-Nab3p-Sen1p complex constitutes a vital component of the nuclear mRNA surveillance in Saccharomyces cerevisiae

  2020cites this paper
• RNA processing machineries in Archaea: the 5′-3′ exoribonuclease aRNase J of the β-CASP family is engaged specifically with the helicase ASH-Ski2 and the 3′-5′ exoribonucleolytic RNA exosome machinery

  2020cites this paper
• Recruitment of Xrn1 to stress-induced genes allows efficient transcription by controlling RNA polymerase II backtracking

  2020cites this paper
• RNA processing machineries in Archaea: the 5 -3 exoribonuclease aRNase J of the (cid:2) -CASP family is engaged specifically with the helicase ASH-Ski2 and the 3 (cid:2) -5 (cid:2) exoribonucleolytic RNA exosome machinery

  2020cites this paper