An Arabidopsis SET domain protein required for maintenance but not establishment of DNA methylation

No abstract is available for this paper.

• Publication year

  2002

• Venue

  EMBO Journal

• Publication date

  2002-12-16

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1093/emboj/cdf687PMID 12486005PMCID PMC139107
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• RNA-directed DNA methylation

  2004cited by this paper
• Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing.

  2002cited by this paper
• Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects.

  2002cited by this paper
• Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation.

  2002cited by this paper
• Genome-wide profiling of DNA methylation reveals transposon targets of CHROMOMETHYLASE3.

  2002cited by this paper
• Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

  2002cited by this paper
• Dependence of Heterochromatic Histone H3 Methylation Patterns on the Arabidopsis Gene DDM1

  2002cited by this paper
• Loss of the Suv 39 h Histone Methyltransferases Impairs Mammalian Heterochromatin and Genome Stability

  2001cited by this paper
• Lsh, a member of the SNF2 family, is required for genome-wide methylation.

  2001cited by this paper
• Requirement of CHROMOMETHYLASE3 for Maintenance of CpXpG Methylation

  2001cited by this paper
• Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability.

  2001cited by this paper
• The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes.

  2001cited by this paper
• Translating the Histone Code

  2001cited by this paper
• Maize Chromomethylase Zea methyltransferase2 Is Required for CpNpG Methylation

  2001cited by this paper
• Mutations in LIKE HETEROCHROMATIN PROTEIN 1 affect flowering time and plant architecture in Arabidopsis.

  2001cited by this paper
• dim‐2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora

  2001cited by this paper
• A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

  2001cited by this paper
• Two Arabidopsis methylation-deficiency mutations confer only partial effects on a methylated endogenous gene family.

  2001cited by this paper
• Role of Histone H3 Lysine 9 Methylation in Epigenetic Control of Heterochromatin Assembly

  2001cited by this paper
• Transitions in Distinct Histone H3 Methylation Patterns at the Heterochromatin Domain Boundaries

  2001cited by this paper
• Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene.

  2001cited by this paper
• DNA methylation and epigenetic inheritance in plants and filamentous fungi.

  2001cited by this paper
• RNA: Guiding Gene Silencing

  2001cited by this paper
• DNA methylation and epigenetic inheritance in plants and filamentous fungi.

  2001cited by this paper
• Regulation of chromatin structure by site-specific histone H3 methyltransferases

  2000cited by this paper
• RNA-directed DNA methylation

  2000cited by this paper
• Arabidopsis PAI gene arrangements, cytosine methylation and expression.

  1999cited by this paper
• An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis.

  1999cited by this paper
• DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development.

  1999cited by this paper
• Maintenance of genomic methylation requires a SWI2/SNF2-like protein

  1999cited by this paper
• The DNA methylation locus DDM1 is required for maintenance of gene silencing in Arabidopsis.

  1998cited by this paper
• A Myb homologue, ATR1, activates tryptophan gene expression in Arabidopsis.

  1998cited by this paper
• Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

  1998cited by this paper
• Cytosine methylation and the ecology of intragenomic parasites.

  1997cited by this paper
• Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development.

  1996cited by this paper
• Demethylation-Induced Developmental Pleiotropy in Arabidopsis

  1996cited by this paper
• Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of Arabidopsis.

  1995cited by this paper
• Assignment of 30 microsatellite loci to the linkage map of Arabidopsis.

  1994cited by this paper
• Arabidopsis thaliana DNA methylation mutants.

  1993cited by this paper
• A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers.

  1993cited by this paper
• A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands.

  1992cited by this paper
• Targeted mutation of the DNA methyltransferase gene results in embryonic lethality.

  1992cited by this paper
• Binary Agrobacterium vectors for plant transformation.

  1984cited by this paper

• Centrophilic retrotransposon integration via CENH3 chromatin in Arabidopsis

  2025cites this paper
• Antagonistic histone H2A variants and autonomous heterochromatin formation shape epigenomic patterns in Arabidopsis

  2025cites this paper
• Plant responses to full moonlight requires the SUVH4 HMTase which may target active genes via interaction with the splicing factor SAP18.

  2025cites this paper
• Molecular Mechanisms Underlying the Establishment, Maintenance, and Removal of DNA Methylation in Plants

  2025cites this paper
• Major effect mutations drive DNA methylation variation after colonization of a novel habitat

  2025cites this paper
• DDM1 Controls Heritable Natural Epigenetic Variation in Arabidopsis

  2025cites this paper
• Advances in DNA methylation and its role in cytoplasmic male sterility in higher plants

  2023cites this paper
• Major transcriptomic differences are induced by warmer temperature conditions experienced during asexual and sexual reproduction in Fragaria vesca ecotypes

  2023cites this paper
• Inhibition of DNA and RNA methylation disturbs root development of moso bamboo.

  2023cites this paper
• Network Analysis of Publicly Available RNA-seq Provides Insights into the Molecular Mechanisms of Plant Defense against Multiple Fungal Pathogens in Arabidopsis thaliana

  2023cites this paper
• Warmer temperature during asexual reproduction induce methylome, transcriptomic, and lasting phenotypic changes in Fragaria vesca ecotypes

  2023cites this paper
• Biological methylation: redefining the link between genotype and phenotype

  2022cites this paper
• N6-methyladenine: A Rare and Dynamic DNA Mark.

  2022cites this paper
• Temperature-induced methylome changes during asexual reproduction trigger transcriptomic and phenotypic changes in Fragaria vesca

  2022influential citation
• miR778 mediates gene expression, histone modification, and DNA methylation during cyst nematode parasitism.

  2022cites this paper
• CRISPR–Cas-mediated transcriptional control and epi-mutagenesis

  2022cites this paper
• Parental methylation mediates how progeny respond to environments of parents and of progeny themselves.

  2022cites this paper
• Mechanistic insights into allosteric regulation of methylated DNA and histone H3 recognition by SRA and SET domains of SUVH5 and the basis for di‐methylation of lysine residue

  2022cites this paper
• Local and global crosstalk among heterochromatin marks drives DNA methylome patterning in Arabidopsis

  2022cites this paper
• Local and global crosstalk among heterochromatin marks drives epigenome patterning in Arabidopsis

  2021cites this paper
• Advances and prospects of epigenetics in plants

  2021cites this paper
• Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

  2021cites this paper
• Histone methylation in epigenetic regulation and temperature responses.

  2021cites this paper
• JMJ27-mediated histone H3K9 demethylation positively regulates drought-stress responses in Arabidopsis.

  2021cites this paper
• Genome-wide identi cation and expression pro ling of SET DOMAIN GROUP family in Dendrobium catenatum

  2021cites this paper
• Combinations of maternal-specific repressive epigenetic marks in the endosperm control seed dormancy

  2020cites this paper
• Transgenerational effect of mutants in the RNA-directed DNA methylation pathway on the triploid block in Arabidopsis

  2020cites this paper
• DEMETER-mediated DNA Demethylation in Gamete Companion Cells and the Endosperm, and its Possible Role in Embryo Development in Arabidopsis

  2020cites this paper
• Genome-Wide Identification of Epigenetic Regulators in Quercus suber L.

  2020cites this paper
• Molecular mechanisms regulating priming and stress memory

  2020cites this paper
• RNAi and miRNA pathways in plants I – molecular mechanisms

  2020cites this paper
• Arabidopsis shoot stem cells display dynamic transcription and DNA methylation patterns

  2020cites this paper
• RNA interference-independent reprogramming of DNA methylation in Arabidopsis

  2020cites this paper
• Detailed insight into the dynamics of the initial phases of de novo RNA-directed DNA methylation in plant cells

  2019cites this paper
• A Nucleosome Bridging Mechanism for Activation of a Maintenance DNA Methyltransferase.

  2019cites this paper
• Role of Chromatin Assembly and Remodeling in Water Stress Responses in Plants

  2019cites this paper
• Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation

  2019cites this paper
• Regulation of allele specific gene expression of the polycomb group target gene PHERES1

  2019influential citation
• Plant models of transgenerational epigenetic inheritance

  2019cites this paper
• Histone tales: lysine methylation, a protagonist in Arabidopsis development.

  2019cites this paper
• Epigenetic Regulation in Fleshy Fruit: Perspective for Grape Berry Development and Ripening

  2019cites this paper
• Dynamics and function of DNA methylation in plants

  2018cites this paper
• Modify the Histone to Win the Battle: Chromatin Dynamics in Plant–Pathogen Interactions

  2018cites this paper
• Mechanistic insights into plant SUVH family H3K9 methyltransferases and their binding to context-biased non-CG DNA methylation

  2018cites this paper
• Etude des voies de silencing transciptionnel indépendantes de la méthylation ADN chez Arabidopsis thaliana

  2018cites this paper
• Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin

  2018cites this paper
• ADCP1: a novel plant H3K9me2 reader

  2018cites this paper
• Where to Cross Over? Defining Crossover Sites in Plants

  2018cites this paper
• Epigenetic activation of meiotic recombination near Arabidopsis thaliana centromeres via loss of H3K9me2 and non-CG DNA methylation

  2018cites this paper
• Piecing together cis‐regulatory networks: insights from epigenomics studies in plants

  2018cites this paper
• Epigenetic activation of meiotic recombination in Arabidopsis centromeres via loss of H3K9me2 and non-CG DNA methylation

  2017cites this paper
• Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM 1 NISHIMURA , Taisuke

  2017cites this paper
• Literature review of baseline information to support the risk assessment of RNAi‐based GM plants

  2017cites this paper
• Epigenetics in Plant Reproductive Development: An Overview from Flowers to Seeds

  2017cites this paper
• Environmentally Induced Genome Instability and its Inheritance

  2017cites this paper
• Epigenetics: History, present status and future perspective

  2017cites this paper
• AtMBD6, a methyl CpG binding domain protein, maintains gene silencing in Arabidopsis by interacting with RNA binding proteins

  2017cites this paper
• Ectopic application of the repressive histone modification H3K9me2 establishes post-zygotic reproductive isolation in Arabidopsis thaliana

  2017cites this paper
• Genetics, Genomics and Breeding of Maize

  2016cites this paper
• Stable methylation of a non-coding RNA gene regulates gene expression in response to abiotic stress in Populus simonii.

  2016cites this paper
• N6-Methyladenine: A Conserved and Dynamic DNA Mark.

  2016cites this paper
• Demethylation of ERECTA receptor genes by IBM1 histone demethylase affects stomatal development

  2016cites this paper
• Epigenetic Regulation of Abiotic Stress Tolerance in Plants

  2016cites this paper
• N 6-Methyladenine : A Conserved and Dynamic DNA

  2016cites this paper
• Importance of DNA and histone methylation in in vitro plant propagation for crop improvement: a review

  2016influential citation
• RNA Pol IV and V in gene silencing: Rebel polymerases evolving away from Pol II's rules.

  2015cites this paper
• Epigenetic Mechanisms in Plants: An Overview

  2015cites this paper
• Mechanisms of Transposable Element Evolution in Plants and Their Effects on Gene Expression

  2015cites this paper
• Radiation-Induced Epigenetic Bystander Effects Demonstrated in Arabidopsis Thaliana

  2015cites this paper
• Accessing the Inaccessible: The Organization, Transcription, Replication, and Repair of Heterochromatin in Plants.

  2015cites this paper
• SUVH1, a Su(var)3–9 family member, promotes the expression of genes targeted by DNA methylation

  2015cites this paper
• DNA methylation pathways and their crosstalk with histone methylation

  2015cites this paper
• Epigenetic reprogramming in plant sexual reproduction

  2014cites this paper
• Decoding the Epigenomes of Herbaceous Plants

  2014cites this paper
• Histone Lysine Demethylases and Their Functions in Plants

  2014cites this paper
• The histone variant H2A.W defines heterochromatin and promotes chromatin condensation in Arabidopsis.

  2014cites this paper
• Functional analysis of Arabidopsis chromatin modification and remodeling regulators (CHR5 and JMJ15) in gene expression

  2014cites this paper
• The Arabidopsis STRESS RESPONSE SUPPRESSOR DEAD-box RNA helicases are nucleolar- and chromocenter-localized proteins that undergo stress-mediated relocalization and are involved in epigenetic gene silencing.

  2014cites this paper
• Functional genomics of seed dormancy in wheat: advances and prospects

  2014cites this paper
• Epigenetic regulation of abiotic stress responses in plants

  2014cites this paper
• Mechanism of DNA methylation-directed histone methylation by KRYPTONITE.

  2014cites this paper
• Histone H3 variants and chaperones in Arabidopsis thaliana heterochromatin dynamics

  2014cites this paper
• Epigenetic information can reveal phylogenetic relationships within Zygophyllales

  2014cites this paper
• DNA methylation maintenance consolidates RNA-directed DNA methylation and transcriptional gene silencing over generations in Arabidopsis thaliana.

  2014cites this paper
• The Role of the Epigenome in Gene Expression Control and the Epimark Changes in Response to the Environment

  2014cites this paper
• Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization

  2013cites this paper
• Dual histone H 3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE

  2013influential citation
• DNA Methylation and Transgenerational Stress Memories in Arabidopsis thaliana

  2013cites this paper
• Etude du contrôle des éléments transposables par la méthylation de l’ADN chez Arabidopsis thaliana

  2013cites this paper
• Chromatin Structure-Mediated Regulation of Nuclear Processes

  2013cites this paper
• Epigenetic switches of tobacco transgenes associate with transient redistribution of histone marks in callus culture

  2013cites this paper
• GEMINIVIRUSES AS MODELS TO STUDY THE ESTABLISHMENT AND MAINTENANCE OF DNA METHYLATION

  2013cites this paper
• Induction of RNA-directed DNA methylation and heritable transcriptional gene silencing as a tool to engineer novel traits in plants

  2013cites this paper
• Epigenetic switches of tobacco transgenes associate with transient redistribution of histone marks in callus culture

  2013cites this paper
• Chromatin Alterations during Pollen Development in Hordeum vulgare

  2013cites this paper
• RNA-directed DNA Methylation in Arabidopsis : Do secondary siRNAs act in trans ? Atypical DNA methylation in genes encoding cysteine-rich peptides

  2013cites this paper
• Plant Epigenetics: A Historical Perspective

  2013cites this paper
• Transitive RNA silencing signals induce cytosine methylation of a transgenic but not an endogenous target.

  2013cites this paper
• Small RNAs and Transgenerational Epigenetic Variation

  2013cites this paper
• Epigenetics : The Second Genetic Code

  2013cites this paper