Substrate-driven gene expression in Roseburia inulinivorans: Importance of inducible enzymes in the utilization of inulin and starch

No abstract is available for this paper.

• Publication year

  2010

• Venue

  Proceedings of the National Academy of Sciences of the United States of America

• Publication date

  2010-08-02

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1073/pnas.1000091107PMID 20679207PMCID PMC3063597
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Coculture Fermentations of Bifidobacterium Species and Bacteroides thetaiotaomicron Reveal a Mechanistic Insight into the Prebiotic Effect of Inulin-Type Fructans

  2009cited by this paper
• Exploring the Diversity of the Bifidobacterial Population in the Human Intestinal Tract

  2009cited by this paper
• Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii

  2008cited by this paper
• A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans

  2007cited by this paper
• Identification of Prebiotic Fructooligosaccharide Metabolism in Lactobacillus plantarum WCFS1 through Microarrays

  2007cited by this paper
• The State of the Art in the Production of Fructose from Inulin Enzymatic Hydrolysis

  2007cited by this paper
• Interactions and competition within the microbial community of the human colon: links between diet and health.

  2007cited by this paper
• Inulin‐type fructans of longer degree of polymerization exert more pronounced in vitro prebiotic effects

  2007cited by this paper
• Cross-Feeding between Bifidobacterium longum BB536 and Acetate-Converting, Butyrate-Producing Colon Bacteria during Growth on Oligofructose

  2006cited by this paper
• Global analysis of carbohydrate utilization by Lactobacillus acidophilus using cDNA microarrays.

  2006cited by this paper
• Two Routes of Metabolic Cross-Feeding between Bifidobacterium adolescentis and Butyrate-Producing Anaerobes from the Human Gut

  2006cited by this paper
• Database mining and transcriptional analysis of genes encoding inulin-modifying enzymes of Aspergillus niger.

  2006cited by this paper
• Proposal of Roseburia faecis sp. nov., Roseburia hominis sp. nov. and Roseburia inulinivorans sp. nov., based on isolates from human faeces.

  2006cited by this paper
• Cell-associated alpha-amylases of butyrate-producing Firmicute bacteria from the human colon.

  2006cited by this paper
• Whole-Genome Transcription Profiling Reveals Genes Up-Regulated by Growth on Fucose in the Human Gut Bacterium “Roseburia inulinivorans”

  2006cited by this paper
• Molecular Diversity, Cultivation, and Improved Detection by Fluorescent In Situ Hybridization of a Dominant Group of Human Gut Bacteria Related to Roseburia spp. or Eubacterium rectale

  2006cited by this paper
• Transcriptional Regulation and Characterization of a Novel β-Fructofuranosidase-Encoding Gene from Bifidobacterium breve UCC2003

  2005cited by this paper
• Diversity of the Human Intestinal Microbial Flora

  2005cited by this paper
• Fermentation of Fructooligosaccharides and Inulin by Bifidobacteria: a Comparative Study of Pure and Fecal Cultures

  2005influential reference
• pH and Peptide Supply Can Radically Alter Bacterial Populations and Short-Chain Fatty Acid Ratios within Microbial Communities from the Human Colon

  2005cited by this paper
• The specificity of the interaction with intestinal bacterial fermentation by prebiotics determines their physiological efficacy

  2004cited by this paper
• The specificity of the interaction with intestinal bacterial fermentation by prebiotics determines their physiological efficacy

  2004cited by this paper
• Dietary modulation of the human colonic microbiota: updating the concept of prebiotics

  2004cited by this paper
• Hydrolysis of oligofructoses by the recombinant beta-fructofuranosidase from Bifidobacterium lactis.

  2004cited by this paper
• Fibre and effects on probiotics (the prebiotic concept)

  2004cited by this paper
• Quantitative and qualitative measure of intralaboratory two‐dimensional protein gel reproducibility and the effects of sample preparation, sample load, and image analysis

  2003cited by this paper
• Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus

  2003cited by this paper
• Effects of Alternative Dietary Substrates on Competition between Human Colonic Bacteria in an Anaerobic Fermentor System

  2003cited by this paper
• Identification of the gene for beta-fructofuranosidase of Bifidobacterium lactis DSM10140(T) and characterization of the enzyme expressed in Escherichia coli.

  2003cited by this paper
• Molecular Analysis of the Enterococcus faecalis Serotype 2 Polysaccharide Determinant

  2003cited by this paper
• Identification of the Gene for β-Fructofuranosidase of Bifidobacterium lactis DSM10140T and Characterization of the Enzyme Expressed in Escherichia coli

  2003cited by this paper
• The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

  2002cited by this paper
• Characterization of a purified β‐fructofuranosidase from Bifidobacterium infantis ATCC 15697

  2002cited by this paper
• β‐Fructosidase superfamily: Homology with some α‐L‐arabinases and β‐D‐xylosidases

  2001cited by this paper
• Fusobacterium prausnitzii and related species represent a dominant group within the human fecal flora.

  2001cited by this paper
• Oligofructose and long-chain inulin: influence on the gut microbial ecology of rats associated with a human faecal flora

  2001cited by this paper
• Analysis of a catabolic operon for sucrose transport and metabolism in Clostridium acetobutylicum ATCC 824.

  2000cited by this paper
• Phylogenetic Relationships of Butyrate-Producing Bacteria from the Human Gut

  2000cited by this paper
• The genes controlling sucrose utilization in Clostridium beijerinckii NCIMB 8052 constitute an operon.

  1999cited by this paper
• Novel phosphotransferase system genes revealed by genome analysis - the complete complement of PTS proteins encoded within the genome of Bacillus subtilis.

  1999cited by this paper
• Molecular analysis of a Clostridium butyricum NCIMB 7423 gene encoding 4-alpha-glucanotransferase and characterization of the recombinant enzyme produced in Escherichia coli.

  1997cited by this paper
• Modification of the intestinal microflora using probiotics and prebiotics.

  1997cited by this paper
• Degradation and utilization of xylans by the rumen anaerobe Prevotella bryantii (formerly P. ruminicola subsp. brevis) B(1)4.

  1997cited by this paper
• Modification of the Intestinal Microflora Using Probiotics and Prebiotics.

  1997cited by this paper
• Operation of the ISO-DALT system

  1987cited by this paper
• A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

  1976cited by this paper

• The synergistic effect of a seaweed and cereal dietary fiber blend on selected gut bacteria via adsorption of nitrite.

  2026cites this paper
• Gut dysbiosis in oncology: a risk factor for immunoresistance

  2026cites this paper
• Gut microbiota profile in adults with abdominal obesity and non-abdominal obesity: links to body composition and macronutrient intake in Semarang, Indonesia—a brief research report

  2025cites this paper
• Composition of the vaginal microbiota in relation to cervical intraepithelial lesions

  2025cites this paper
• Ideal dietary fiber model: Personalized gut microbiota modulation based on structure-function relationships.

  2025cites this paper
• Enzymatic synthesis of analogous human milk oligosaccharide and its prebiotic attributes

  2025cites this paper
• Novel insights into carbohydrate utilisation, antimicrobial resistance, and sporulation potential in Roseburia intestinalis isolates across diverse geographical locations

  2025cites this paper
• Comparative Analysis of Growth Dynamics and Relative Abundances of Gut Microbiota Influenced by Ketogenic Diet

  2025cites this paper
• Synergistic Effects of Probiotics and Lifestyle Interventions on Intestinal Microbiota Composition and Clinical Outcomes in Obese Adults

  2025cites this paper
• Effects of Different Hemicellulose Components on Fermentation Kinetics and Microbial Composition in Fecal Inoculum from Suckling Piglets In Vitro

  2025cites this paper
• Bioconversion-Based Postbiotics Enhance Muscle Strength and Modulate Gut Microbiota in Healthy Individuals: A Randomized, Double-Blind, Placebo-Controlled Trial

  2025cites this paper
• Microbiota-Short Chain Fatty Acid Relationships and Microbial Substrate Preferences Vary Across the Spectrum of Irritable Bowel Syndrome (IBS)

  2024cites this paper
• The Effects of Novel Co-Amorphous Naringenin and Fisetin Compounds on a Diet-Induced Obesity Murine Model

  2024cites this paper
• Associations of Stool Metal Exposures with Childhood Gut Microbiome Multiomics Profiles in a Prospective Birth Cohort Study.

  2024cites this paper
• Factors affecting plant food particle behaviour during in vitro colonic microbial fermentation

  2024cites this paper
• Division mechanism of labor in Diqing Tibetan Pigs gut microbiota for dietary fiber efficiently utilization.

  2024cites this paper
• Effect of green banana and pineapple fibre powder consumption on host gut microbiome

  2024cites this paper
• The mediating role of metabolites between gut microbiome and Hirschsprung disease: a bidirectional two-step Mendelian randomization study

  2024cites this paper
• Potential role of short-chain fatty acids in irritable bowel syndrome in overweight and obese individuals

  2024cites this paper
• Gut microbiome remodeling and metabolomic profile improves in response to protein pacing with intermittent fasting versus continuous caloric restriction

  2024cites this paper
• In Silico Safety Assessment of Bacillus Isolated from Polish Bee Pollen and Bee Bread as Novel Probiotic Candidates

  2024cites this paper
• The role of diet in modulating the intestinal microbiota in healthy adults: Is the evidence enough?

  2023cites this paper
• Metagenomic characterization of the cecal microbiota community and functions in finishing pigs fed fermented Boehmeria nivea

  2023cites this paper
• Interplay between inflammatory bowel disease therapeutics and the gut microbiome reveals opportunities for novel treatment approaches

  2023cites this paper
• Inclusion of up to 20% Black Soldier Fly larvae meal in broiler chicken diet has a minor effect on caecal microbiota

  2023cites this paper
• Combined oral intake of short and long fructans alters the gut microbiota in food allergy model mice and contributes to food allergy prevention

  2023cites this paper
• Composition and functional profiles of gut microbiota reflect the treatment stage, severity, and etiology of acute pancreatitis

  2023cites this paper
• Shotgun Metagenomic Sequencing Revealed the Prebiotic Potential of a Fruit Juice Drink with Fermentable Fibres in Healthy Humans

  2023cites this paper
• Utilization of dietary mixed-linkage β-glucans by the Firmicute Blautia producta

  2023cites this paper
• Limosilactobacillus reuteri administration alters the gut-brain-behavior axis in a sex-dependent manner in socially monogamous prairie voles

  2023cites this paper
• Dysbiosis in gastrointestinal pathophysiology: Role of the gut microbiome in Gulf War Illness

  2023cites this paper
• An Integrative Multiomics Approach to Characterize Prebiotic Inulin Effects on Faecalibacterium prausnitzii

  2022cites this paper
• Biomarker signatures in pathophysiology and therapeutic interventions in inflammatory bowel diseases

  2022cites this paper
• Dietary fiber chemical structure determined gut microbiota dynamics

  2022cites this paper
• Short-Term Grape Consumption Diminishes UV-Induced Skin Erythema

  2022cites this paper
• Butyrate-producing colonic clostridia: picky glycan utilization specialists.

  2022cites this paper
• Multi-Omic Analyses Reveal Bifidogenic Effect and Metabolomic Shifts in Healthy Human Cohort Supplemented With a Prebiotic Dietary Fiber Blend

  2022cites this paper
• Lentils and Yeast Fibers: A New Strategy to Mitigate Enterotoxigenic Escherichia coli (ETEC) Strain H10407 Virulence?

  2022cites this paper
• New Developments and Opportunities of Microbiota in Treating Breast Cancers

  2022cites this paper
• Microenvironmental modulation of the intestinal epithelial barrier

  2022cites this paper
• Dietary Influences on the Microbiota–Gut–Brain Axis

  2021cites this paper
• Inulin-grown Faecalibacterium prausnitzii cross-feeds fructose to the human intestinal epithelium

  2021cites this paper
• FiberGrowth Pipeline: A Framework Toward Predicting Fiber-Specific Growth From Human Gut Bacteroidetes Genomes

  2021cites this paper
• Chicory inulin enhances fermentation of 2'-fucosyllactose by infant fecal microbiota and differentially influences immature dendritic cell and T-cell cytokine responses under normal and Th2-polarizing conditions.

  2021cites this paper
• Resistant starch, microbiome, and precision modulation

  2021cites this paper
• Identification of the relationship between the gut microbiome and feed efficiency in a commercial pig cohort.

  2021cites this paper
• Characterization of fructooligosaccharide metabolism and fructooligosaccharide-degrading enzymes in human commensal butyrate producers

  2021cites this paper
• Microbes, human milk, and prebiotics

  2021cites this paper
• Communal Living: Glycan Utilization by the Human Gut Microbiota.

  2020cites this paper
• Fermentation of Chicory Fructo‐Oligosaccharides and Native Inulin by Infant Fecal Microbiota Attenuates Pro‐Inflammatory Responses in Immature Dendritic Cells in an Infant‐Age‐Dependent and Fructan‐Specific Way

  2020cites this paper
• New View on Dietary Fiber Selection for Predictable Shifts in Gut Microbiota

  2020cites this paper
• The Gut Microbiome and Individual-Specific Responses to Diet

  2020cites this paper
• Metagenomic analysis of the gut microbiome in atherosclerosis patients identify cross‐cohort microbial signatures and potential therapeutic target

  2020cites this paper
• Starch Digestion by Gut Bacteria: Crowdsourcing for Carbs.

  2020cites this paper
• Black soldier fly and gut health in broiler chickens: insights into the relationship between cecal microbiota and intestinal mucin composition

  2020cites this paper
• Complete Genome Sequence and Carbohydrates-Active EnZymes (CAZymes) Analysis of Lactobacillus paracasei DTA72, a Potential Probiotic Strain with Strong Capability to Use Inulin

  2020cites this paper
• The Controversial Role of Human Gut Lachnospiraceae

  2020cites this paper
• Conjugation Protocol Optimised for Roseburia inulinivorans and Eubacterium rectale.

  2020cites this paper
• Effects of dietary Hermetia illucens meal inclusion on cecal microbiota and small intestinal mucin dynamics and infiltration with immune cells of weaned piglets

  2020influential citation
• Alcohol or Gut Microbiota: Who Is the Guilty?

  2019cites this paper
• Metagenomic reconstructions of gut microbial metabolism in weanling pigs

  2019cites this paper
• Simplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model

  2019cites this paper
• Core Gut Bacteria Analysis of Healthy Mice

  2019influential citation
• Heterologous gene expression in the human gut bacteria Eubacterium rectale and Roseburia inulinivorans by means of conjugative plasmids.

  2019cites this paper
• Chapter 18 Cross-feeding during human colon fermentation

  2019cites this paper
• Western Indian Rural Gut Microbial Diversity in Extreme Prakriti Endo-Phenotypes Reveals Signature Microbes

  2018cites this paper
• Intestinal Microbiome in Health and Disease: Introduction

  2018cites this paper
• Composition and Function of the Gut Microbiome

  2018cites this paper
• Breast cancer in postmenopausal women is associated with an altered gut metagenome

  2018cites this paper
• You are what you eat: diet, health and the gut microbiota

  2018cites this paper
• Genome-wide dissection and expression profiling of unique glyoxalase III genes in soybean reveal the differential pattern of transcriptional regulation

  2018cites this paper
• In vitro fermentation of Cookeina speciosa glucans stimulates the growth of the butyrogenic Clostridium cluster XIVa in a targeted way.

  2018cites this paper
• Human Gut Symbiont Roseburia hominis Promotes and Regulates Innate Immunity

  2017cites this paper
• Inulin-type fructan degradation capacity of Clostridium cluster IV and XIVa butyrate-producing colon bacteria and their associated metabolic outcomes.

  2017cites this paper
• Bifidobacteria and the infant gut: an example of co-evolution and natural selection

  2017cites this paper
• Changes of gut microbiota structure and morphology in weaned piglets treated with fresh fermented soybean meal

  2017cites this paper
• The potential of berries to serve as selective inhibitors of pathogens and promoters of beneficial microorganisms

  2017cites this paper
• Dietary Fiber, Soluble and Insoluble, Carbohydrates, Fructose, and Lipids

  2017cites this paper
• The potential of berries to serve as selective inhibitors of pathogens and promoters of beneficial microorganisms

  2017cites this paper
• Mannan‐ and xylooligosaccharides modulate caecal microbiota and expression of inflammatory‐related cytokines and reduce caecal Salmonella Enteritidis colonisation in young chickens

  2017cites this paper
• Roseburia spp.: a marker of health?

  2017cites this paper
• Insights into the function of n-3 PUFAs in fat-1 transgenic cattle[S]

  2017cites this paper
• Changes of gut microbiota structure and morphology in weaned piglets treated with fresh fermented soybean meal

  2017cites this paper
• Linking dietary patterns with gut microbial composition and function

  2017cites this paper
• Glycan Utilization and Cross-Feeding Activities by Bifidobacteria.

  2017cites this paper
• Bifidobacteria and Butyrate-Producing Colon Bacteria: Importance and Strategies for Their Stimulation in the Human Gut

  2016influential citation
• The role of diet on gut microbiota composition.

  2016cites this paper
• Modeling Effects of Diet on Human Gut Microbiota

  2016cites this paper
• Gene expression profiling gut microbiota in different races of humans

  2016cites this paper
• Conversion of Cellulose to Ethanol by the Biofuels Microbe Clostridium Phytofermentans: Quantification of Growth and Role of an Rnf-Complex in Energy Conservation

  2016cites this paper
• Phenotypic Characterisation of Clostridium difficile PCR Ribotype 078 and Comparison with PCR Ribotypes 027 and 002

  2016cites this paper
• The gut microbiota: A treasure for human health.

  2016cites this paper
• Polysaccharide utilization loci and nutritional specialization in a dominant group of butyrate-producing human colonic Firmicutes

  2016cites this paper
• The Sus operon: a model system for starch uptake by the human gut Bacteroidetes

  2016cites this paper
• Chapter 8 Nondigestible Carbohydrates Nutritional Aspects

  2016cites this paper
• Health benefits of prebiotic fibers.

  2015cites this paper
• Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale

  2015influential citation
• Genomics of the Genus Bifidobacterium Reveals Species-Specific Adaptation to the Glycan-Rich Gut Environment

  2015cites this paper
• Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii

  2015cites this paper
• Exploring fructan utilisation by members of the human intestinal microbiota

  2015cites this paper