Pleistocene diversification of living squirrel monkeys (Saimiri spp.) inferred from complete mitochondrial genome sequences.

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Molecular Phylogenetics and Evolution

• Publication date

  2011-06-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/j.ympev.2011.03.025PMID 21443955
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  2012cited by this paper
• SequenceMatrix: concatenation software for the fast assembly of multi‐gene datasets with character set and codon information

  2011influential reference
• The Response of Vegetation on the Andean Flank in Western Amazonia to Pleistocene Climate Change

  2011cited by this paper
• Molecular phylogenetics and phylogeography of the white-fronted capuchin (Cebus albifrons; Cebidae, Primates) by means of mtCOII gene sequences.

  2010cited by this paper
• TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

  2010cited by this paper
• Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity

  2010cited by this paper
• Platyrrhines, PAUP, parallelism, and the Long Lineage Hypothesis: A reply to.

  2010cited by this paper
• Phylogeny and phylogeography of squirrel monkeys (genus Saimiri) based on cytochrome b genetic analysis

  2010influential reference
• Formal ratification of the Quaternary System/Period and the Pleistocene Series/Epoch with a base at 2.58 Ma

  2010influential reference
• Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times.

  2009influential reference
• Successive radiations, not stasis, in the South American primate fauna

  2009influential reference
• Timing primate evolution: Lessons from the discordance between molecular and paleontological estimates

  2008cited by this paper
• AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics

  2008cited by this paper
• The Primate Fossil Record

  2008cited by this paper
• Speciation timing and neotropical biodiversity: the Tertiary–Quaternary debate in the light of molecular phylogenetic evidence

  2008cited by this paper
• The anatomy of Dolichocebus gaimanensis, a stem platyrrhine monkey from Argentina.

  2008cited by this paper
• BMC Evolutionary Biology BioMed Central

  2007influential reference
• The Biogeographic History of Mesoamerican Primates

  2006influential reference
• Paleontological evidence to date the tree of life.

  2006cited by this paper
• Quaternary speciation in the Neotropics

  2006cited by this paper
• New Perspectives in the Study of Mesoamerican Primates: Distribution, Ecology, Behavior, and Conservation

  2006cited by this paper
• Natural hybridization betweenSaimiri taxa in the Peruvian Amazonia

  2006cited by this paper
• Primate molecular divergence dates.

  2006cited by this paper
• RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

  2006influential reference
• Theropithecus: The Rise and Fall of a Primate Genus

  2005cited by this paper
• Catarrhine primate divergence dates estimated from complete mitochondrial genomes: concordance with fossil and nuclear DNA evidence.

  2005cited by this paper
• MUSCLE: multiple sequence alignment with high accuracy and high throughput.

  2004cited by this paper
• The phylogenetic position of Morotopithecus.

  2004cited by this paper
• Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes

  2004cited by this paper
• The implications of Tertiary and Quaternary sea level rise events for avian distribution patterns in the lowlands of northern South America

  2004influential reference
• The primate fossil record

  2003cited by this paper
• MacClade 4: analysis of phy-logeny and character evolution

  2003cited by this paper
• Are vigilance, risk from avian predators and group size consequences of habitat structure? a comparison of three species of squirrel monkey (Saimiri oerstedii, S. boliviensis, and S. sciureus)

  2003cited by this paper
• Molecular systematics and biogeography of the Neotropical monkey genus, Alouatta.

  2003cited by this paper
• Genetic analysis of the Saimiri breeding colony of the Pasteur Institute (French Guiana): development of a molecular typing method using a combination of nuclear and mitochondrial DNA markers

  2003cited by this paper
• MrBayes 3: Bayesian phylogenetic inference under mixed models

  2003influential reference
• Divergence Time and Evolutionary Rate Estimation with Multilocus Data

  2002influential reference
• Estimating Divergence Times from Molecular Data on Phylogenetic and Population Genetic Timescales

  2002cited by this paper
• The Victoriapithecidae, Cercopithecoidea

  2002cited by this paper
• Divergence time and evolutionary rate estimation with multilocus data.

  2002cited by this paper
• Geology and palaeontology of the Upper Miocene Toros-Menalla hominid locality, Chad

  2002cited by this paper
• The hominoid radiation in Asia

  2002cited by this paper
• A new hominid from the Upper Miocene of Chad, Central Africa

  2002cited by this paper
• Late Miocene hominids from the Middle Awash, Ethiopia

  2001cited by this paper
• First hominid from the Miocene (Lukeino Formation, Kenya)

  2001cited by this paper
• Amazon plant diversity and climate through the Cenozoic

  2001cited by this paper
• Molecular Phylogenetics and Evolution

  2001cited by this paper
• Lineage-specific evolutionary rate in mammalian mtDNA.

  2000cited by this paper
• Biogeographic and Ecological Forces Responsible for Speciation in Ateles

  2000cited by this paper
• DIVERSIFICATION OF RAINFOREST FAUNAS: An Integrated Molecular Approach

  2000influential reference
• The Central American squirrel monkey (Saimiri oerstedii): introduced hybrid or endemic species?

  2000influential reference
• The late Pleistocene cultures of South America

  1999influential reference
• Disparate Data Sets Resolve Squirrel Monkey (Saimiri) Taxonomy: Implications for Behavioral Ecology and Biomedical Usage

  1999influential reference
• Estimating the rate of evolution of the rate of molecular evolution.

  1998influential reference
• Captive breeding of squirrel monkeys, Saimiri sciureus and Saimiri boliviensis: The problem of hybrid groups

  1998cited by this paper
• Functional morphology of the postcranium and locomotor behavior of Neosaimiri fieldsi, a Saimiri-like Middle Miocene platyrrhine.

  1997influential reference
• New world primates : ecology, evolution, and behavior

  1997cited by this paper
• Theropithecus. The rise and fall of a primate genus

  1995cited by this paper
• New specimens of Neosaimiri fieldsi from La Venta, Colombia: a middle Miocene ancestor of the living squirrel monkeys.

  1994influential reference
• Squirrel Monkey (Genus Saimiri) Taxonomy

  1993cited by this paper
• Theropithecus: Evolution of Theropithecus in the Turkana Basin

  1993cited by this paper
• Protein electrophoretic variability in Saimiri and the question of its species status

  1993cited by this paper
• Species, Species Concepts and Primate Evolution

  1993cited by this paper
• Morphological and behavioral adaptations for foraging in generalist primates: the case of the cebines.

  1992cited by this paper
• Dental variability inSaimiri and the taxonomic status ofNeosaimiri fieldsi, an early squirrel monkey from La Venta, Colombia

  1991influential reference
• Genetic relationships among three squirrel monkey types: Implications for taxonomy, biomedical research, and captive breeding

  1990cited by this paper
• Role of cytogenetics for breeding management of squirrel monkey colonies

  1990cited by this paper
• Habitat use by squirrel monkeys (Saimiri oerstedi) in Costa Rica.

  1987cited by this paper
• A fossil owl monkey from La Venta, Colombia

  1987cited by this paper
• Handbook of Squirrel Monkey Research

  1985cited by this paper
• The Taxonomy and Distribution of Squirrel Monkeys (Saimiri)

  1985influential reference
• Are There Any Anthropoid Primate Living Fossils

  1984cited by this paper
• Taxonomy of squirrel monkeys genus Saimiri (Cebidae, platyrrhini): A preliminary report with description of a hitherto unnamed form

  1984influential reference
• Cranial anatomy and implications of Dolichocebus, a late Oligocene ceboid primate

  1979influential reference
• Notes on tertiary platyrrhine monkeys and description of a new genus from the late Miocene of Colombia.

  1970influential reference
• The Recent Mammals of the Neotropical Region: A Zoogeographic and Ecological Review

  1969cited by this paper
• Speciation in amazonian forest birds.

  1969cited by this paper
• Fossil Monkeys from the Miocene of Napak, North-East Uganda

  1968cited by this paper
• Species des mammifères bimanes et quadrumanes; suivi d'un mémoire sur les Oryctéropes ...

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  2015cites this paper
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  2015influential citation
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  2015influential citation
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