Characterizing man-made and natural modifications of microbial diversity and activity in coastal ecosystems

No abstract is available for this paper.

• Publication year

  2002

• Venue

  Antonie van Leeuwenhoek

• Publication date

  2002-08-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1023/A:1020561422706PMID 12448745
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Significance of euphotic , subtidal sediments to oxygen and nutrient cycling in a temperate estuary

  2006cited by this paper
• A mini-review of microbial consortia: Their roles in aquatic production and biogeochemical cycling

  2004cited by this paper
• Spatiotemporal Variability of Wet Atmospheric Nitrogen Deposition to the Neuse River Estuary , NC . Journal of Environmental Quality

  2001cited by this paper
• The Recent Increase in Atlantic Hurricane Activity: Causes and Implications

  2001cited by this paper
• Distribution of nitrogen-fixing microorganisms along the Neuse River Estuary, North Carolina

  2001cited by this paper
• Application of photopigment biomarkers for quantifying microalgal community composition and in situ growth rates

  2001influential reference
• Pseudomonas stutzeri Nitrite Reductase Gene Abundance in Environmental Samples Measured by Real-Time PCR

  2001cited by this paper
• Spatiotemporal variability of wet atmospheric nitrogen deposition to the Neuse River Estuary, North Carolina.

  2001cited by this paper
• Ecosystem impacts of three sequential hurricanes (Dennis, Floyd, and Irene) on the United States' largest lagoonal estuary, Pamlico Sound, NC

  2001cited by this paper
• Microbiological, molecular biological and stable isotopic evidence for nitrogen fixation in the open waters of Lake Michigan.

  2001cited by this paper
• NUTRIENT LIMITATION OF PHYTOPLANKTON IN A SEASONALLY OPEN BAR‐BUILT ESTUARY: WILSON INLET, WESTERN AUSTRALIA

  2001cited by this paper
• Distributions of carbohydrates, including uronic acids, in estuarine waters of Galveston Bay

  2001cited by this paper
• Nitrogen loading in coastal water bodies : an atmospheric perspective

  2001cited by this paper
• Response of soybean rhizosphere communities to human hygiene water addition as determined by community level physiological profiling (CLPP) and terminal restriction fragment length polymorphism (TRFLP) analysis.

  2000influential reference
• GROWTH, PRIMARY PRODUCTIVITY, AND NITROGEN FIXATION POTENTIAL OF NODULARIA SPP. (CYANOPHYCEAE) IN WATER FROM A SUBTROPICAL ESTUARY IN THE UNITED STATES 

  2000cited by this paper
• Development of Real-Time PCR Assays for Rapid Detection of Pfiesteria piscicida and Related Dinoflagellates

  2000cited by this paper
• Hurricanes' hydrological, ecological effects linger in major U.S. estuary

  2000cited by this paper
• Diel Patterns of Regulation of rbcL Transcription in a Cyanobacterium and a Prymnesiophyte

  2000cited by this paper
• Quantitative Analysis of Small-Subunit rRNA Genes in Mixed Microbial Populations via 5′-Nuclease Assays

  2000cited by this paper
• Small ribosomal RNA content in marine Proteobacteria during non-steady-state growth.

  1999cited by this paper
• Diversity of Nitrous Oxide Reductase (nosZ) Genes in Continental Shelf Sediments

  1999cited by this paper
• Atlantic Basin Hurricanes: Indices of Climatic Changes

  1999cited by this paper
• RESPONSES OF THE PHYTOPLANKTON COMMUNITY GROWTH RATE TO NUTRIENT PULSES IN VARIABLE ESTUARINE ENVIRONMENTS

  1999cited by this paper
• Ubiquity of heterotrophic diazotrophs in marine microbial mats

  1999cited by this paper
• Recovery and phylogenetic analysis of archaeal rRNA sequences from continental shelf sediments.

  1998cited by this paper
• Microbial Evolution, Diversity, and Ecology: A Decade of Ribosomal RNA Analysis of Uncultivated Microorganisms

  1998cited by this paper
• Vertical distribution and temporal variation of marine planktonic archaea in the Gerlache Strait, Antarctica, during early spring

  1998cited by this paper
• Nitrogen Fixation in the Marine Environment: Genetic Potential and Nitrogenase Expression

  1998cited by this paper
• Phylogeny of Dissimilatory Sulfite Reductases Supports an Early Origin of Sulfate Respiration

  1998cited by this paper
• Sediment water exchange of trace metals and nutrients in Galveston Bay, Texas

  1998cited by this paper
• Molecular characterization of a sulfate-reducing consortium which mineralizes benzene

  1998cited by this paper
• Nitrous oxide reductase (nosZ) gene-specific PCR primers for detection of denitrifiers and three nosZ genes from marine sediments.

  1998cited by this paper
• Application of Molecular Biological Techniques to a Seasonal Study of Ammonia Oxidation in a Eutrophic Freshwater Lake

  1998cited by this paper
• Phylogenetic Diversity of Ultraplankton Plastid Small-Subunit rRNA Genes Recovered in Environmental Nucleic Acid Samples from the Pacific and Atlantic Coasts of the United States

  1998cited by this paper
• Phytoplankton Pigments in Oceanography: Guidelines to Modern Methods

  1997cited by this paper
• Dynamic model of phytoplankton growth and acclimation: responses of the balanced growth rate and the chlorophyll a: carbon ratio to light, nutrient-limitation and temperature

  1997cited by this paper
• Diversity and depth-specific distribution of SAR11 cluster rRNA genes from marine planktonic bacteria

  1997cited by this paper
• Harmful or exceptional phytoplankton blooms in the marine ecosystem

  1997cited by this paper
• Climate Trends Associated with Multidecadal Variability of Atlantic Hurricane Activity

  1997cited by this paper
• Diversity of the ribulose bisphosphate carboxylase/oxygenase form I gene (rbcL) in natural phytoplankton communities

  1997cited by this paper
• Isotopic and elemental characterization of colloidal organic matter from the Chesapeake Bay and Galveston Bay

  1997cited by this paper
• Bioavailability of atmospheric organic nitrogen deposition to coastal phytoplankton

  1997cited by this paper
• Coastal eutrophication and harmful algal blooms: Importance of atmospheric deposition and groundwater as “new” nitrogen and other nutrient sources

  1997cited by this paper
• Environmental controls of phytoplankton bloom dynamics in the Neuse River Estuary, North Carolina, U.S.A.

  1997cited by this paper
• Bacterial diversity among small-subunit rRNA gene clones and cellular isolates from the same seawater sample

  1997influential reference
• Physiology, ecology, and toxic properties of marine cyanobacteria blooms

  1997cited by this paper
• Cell biology and molecular basis of denitrification.

  1997cited by this paper
• Brown Tide blooms in Long Island’s coastal waters linked to interannual variability in groundwater flow

  1997cited by this paper
• Phylogenetic diversity of Archaea in sediment samples from a coastal salt marsh

  1997cited by this paper
• The particulate methane monooxygenase gene pmoA and its use as a functional gene probe for methanotrophs.

  1997cited by this paper
• Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA

  1997cited by this paper
• Flow scintillation counting of 14 C-labeled microalgal photosynthetic pigments

  1996cited by this paper
• Temporal Variability in Nitrogenase Gene Expression in Natural Populations of the Marine Cyanobacterium Trichodesmium thiebautii

  1996cited by this paper
• An empirical model of the phytoplankton chlorophyll: carbon ratio - the conversion factor between productivity and growth rate

  1996influential reference
• Detection of stratified microbial populations related to Chlorobium and Fibrobacter species in the Atlantic and Pacific oceans

  1996cited by this paper
• Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments

  1996cited by this paper
• A comparison of cyanobacterial bloom dynamics in freshwater, estuarine and marine environments

  1996cited by this paper
• Physiological ecology of toxic aquatic cyanobacteria

  1996cited by this paper
• Consortial N2 fixation: a strategy for meeting nitrogen requirements of marine and terrestrial cyanobacterial mats

  1996cited by this paper
• CHEMTAX - a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton

  1996cited by this paper
• Underwater observatory captures coastal upwelling events off New Jersey

  1996cited by this paper
• Conservation of the genes for dissimilatory sulfite reductase from Desulfovibrio vulgaris and Archaeoglobus fulgidus allows their detection by PCR

  1995cited by this paper
• Coastal eutrophication in relation to atmospheric nitrogen deposition: Current perspectives

  1995cited by this paper
• An empirical model of the phytoplankton chlorophyll : carbon ratio‐the conversion factor between productivity and growth rate

  1995influential reference
• Coastal marine eutrophication: A definition, social causes, and future concerns

  1995cited by this paper
• Inputs, transformations, and transport of nitrogen and phosphorus in Chesapeake Bay and selected tributaries

  1995cited by this paper
• Ciliategrazing on picoplankton in a eutrophic reservoir during the summer phytoplankton maximum: A study at the species and community level

  1995cited by this paper
• Detection of ammonium-oxidizing bacteria of the beta-subclass of the class Proteobacteria in aquatic samples with the PCR

  1995cited by this paper
• Detection and counting of Nitrobacter populations in soil by PCR

  1995cited by this paper
• Nutrient-related selection mechanisms in marine phytoplankton communities and the impact of eutrophication on the planktonic food web

  1995cited by this paper
• Seasonality in nutrient concentrations in Galveston Bay

  1995influential reference
• Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

  1995cited by this paper
• Detection of ammonium-oxidizing bacteria of the beta-subclass of the class Proteobacteria in aquatic samples with the PCR

  1995cited by this paper
• Isotopic characterization of atmospheric nitrogen inputs as sources of enhanced primary production in coastal Atlantic Ocean waters

  1994cited by this paper
• The chlorophyll-labeling method: measuring specific rates of chlorophyll a synthesis in cultures and in the open ocean

  1994cited by this paper
• Improved separations of phytoplankton pigments using temperature-controlled high performance liquid chromatography

  1994cited by this paper
• A molecular technique for identification of bacteria using small subunit ribosomal RNA sequences.

  1994cited by this paper
• Dynamics of NH4+ and NO3− uptake in the water column of the Neuse River Estuary, North Carolina

  1994cited by this paper
• Partitioning of Cu, Pb, Ag, Zn, Fe, Al, and Mn between filter-retained particles, colloids, and solution in six Texas estuaries

  1994influential reference
• Effect of nitrogen source on the size distribution within marine phytoplankton populations

  1994cited by this paper
• Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans

  1993cited by this paper
• Microalgal Pigment Assessments Using High-Performance Liquid Chromatography: A Synopsis of Organismal and Ecological Applications

  1993cited by this paper
• Trace metal chemistry of Galveston Bay: water, sediments and biota

  1993cited by this paper
• Time-course development of 14C specificactivity of chlorophyll a, carbon, and proteins in algal cultures

  1993cited by this paper
• Phylogenetic diversity of aggregate‐attached vs. free‐living marine bacterial assemblages

  1993cited by this paper
• DIFFERENTIAL FEEDING BY MARINE FLAGELLATES ON GROWING VERSUS STARVING, AND ON MOTILE VERSUS NONMOTILE, BACTERIAL PREY

  1993cited by this paper
• Comparison of Nucleic Acid Hybridization and Fluorometry for Measurement of the Relationship between RNA/DNA Ratio and Growth Rate in a Marine Bacterium

  1993cited by this paper
• The carotenoid-labeling method: measuring specific rates of carotenoid synthesis in natural phytoplankton communities

  1993cited by this paper
• Dynamics of Autotrophic Picoplankton in Marine and Freshwater Ecosystems

  1993cited by this paper
• The chlorophyll‐labeling method: Measuring specific rates of chlorophyll a synthesis in cultures and in the open ocean

  1993cited by this paper
• Significance of euphotic sediments to oxygen and nutrient cycling in a temperate estuary

  1992cited by this paper
• Archaea in coastal marine environments.

  1992cited by this paper
• A comparison of substrates for quantifying the signal from a nonradiolabeled DNA probe.

  1992cited by this paper
• Novel major archaebacterial group from marine plankton

  1992cited by this paper
• The role of dissolved organic nitrogen in phytoplankton nutrition, cell biology and ecology

  1991cited by this paper
• Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton

  1991cited by this paper
• Origin, evolution, and distribution of shoreface sand ridges, Atlantic inner shelf, U.S.A.

  1991cited by this paper
• Seasonal and hydrological control of phytoplankton nutrient limitation in the lower Neuse River Estuary, North Carolina

  1991cited by this paper
• Amplification, cloning, and sequencing of a nifH segment from aquatic microorganisms and natural communities

  1991cited by this paper
• Genetic diversity in Sargasso Sea bacterioplankton

  1990cited by this paper

• HFPO-DA and PFOA exert differential combined toxicity with Cd in Paramecium: growth, behavior and molecular insights

  2026cites this paper
• Substituting photoautotrophic with heterotrophic Chlorella species for water quality regulation and microbial community modification in Litopenaeus vannamei pond culture

  2025cites this paper
• Microbial community structure and metabolic characteristics in sediments from five different deep-sea trenches

  2025cites this paper
• Salt Marsh Soil Organic Carbon is Regulated by Drivers of Microbial Activity

  2024cites this paper
• The structure changes of microbial food web during the culture of grass carp larvae

  2023cites this paper
• The Impact of IMTA on the Spatial and Temporal Distribution of the Surface Planktonic Bacteria Community in the Surrounding Sea Area of Xiasanhengshan Island of the East China Sea

  2023cites this paper
• Characterization of metal resistance genes carried by waterborne free-living and particle-attached bacteria in the Pearl River Estuary.

  2023cites this paper
• Assessing the shaping factors for archaeal and bacterial communities in tidal wetland soils contaminated with polycyclic aromatic hydrocarbons

  2023cites this paper
• Microbiomes and Planctomycete diversity in large-scale aquaria habitats

  2022cites this paper
• Disproportionate responses between free-living and particle-attached bacteria during the transition to oxygen-deficient zones in the Bohai Seawater.

  2021cites this paper
• Functional plasticity in oyster gut microbiomes along a eutrophication gradient in an urbanized estuary

  2021cites this paper
• Successional patterns of bacterial communities and their functions in shrimp aquaculture pond water across farming phases

  2021cites this paper
• Safety evaluation for the use of Bacillus amyloliquefaciens in freshwater fish cultures

  2021cites this paper
• Effects of sucrose addition on water quality and bacterioplankton community in the Pacific White Shrimp ( Litopenaeus vannamei ) culture system

  2021cites this paper
• Impact of artificial reefs on sediment bacterial structure and function in Bohai Bay.

  2019cites this paper
• Bacterial community structure and functional diversity in subsurface seawater from the western coastal ecosystem of the Arabian Sea, India.

  2019cites this paper
• Effects on the Function of Three Trophic Levels in Marine Plankton Communities under Stress from the Antifouling Compound Zinc Pyrithione

  2017cites this paper
• Effect of combined use of Bacillus and molasses on microbial communities in shrimp cultural enclosure systems

  2017cites this paper
• Metabolic and phylogenetic profiles of microbial communities from a mariculture base on the Chinese Guangdong coast

  2017cites this paper
• Assessing Interactions between Estuary Water Quality and Terrestrial Land Cover in Hurricane Events with Multi-sensor Remote Sensing

  2017cites this paper
• Contrasting microbial communities across anthropogenic pollution gradients: MV Rena shipwreck versus urban pressures

  2016influential citation
• Riverine Bacterial Communities Reveal Environmental Disturbance Signatures within the Betaproteobacteria and Verrucomicrobia

  2016cites this paper
• The Open Access Israeli Journal of Aquaculture – Bamidgeh

  2015cites this paper
• Variation of Functional Diversity of Microbial Communities in Water of Polyculture of Portunus trituberculatus , Litopenaeus vannamei and Ruditapes philippinarum

  2015cites this paper
• Structure and Function of Cyanobacterial Mats in Wetlands of Belize

  2015cites this paper
• Selecting an HPLC method for chemotaxonomic analysis of phytoplankton community in Mediterranean coastal lagoons

  2015cites this paper
• Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments

  2015cites this paper
• Identification of Surface Water Quality along the Coast of Sanya, South China Sea

  2015cites this paper
• Metabolic and phylogenetic profile of bacterial community in Guishan coastal water (Pearl River Estuary), South China Sea

  2014cites this paper
• Effect of elevated CO2 on marine bacterioplankton and biogeochemical processes

  2014cites this paper
• Extreme Eutrophication in Shallow Estuaries and Lagoons of California Is Driven by a Unique Combination of Local Watershed Modifications That Trump Variability Associated with Wet and Dry Seasons

  2014cites this paper
• Biogenic Particle Reworking and Bacterial–Invertebrate Interactions in Marine Sediments

  2013cites this paper
• Effluents of Shrimp Farms and Its Influence on the Coastal Ecosystems of Bahía de Kino, Mexico

  2013cites this paper
• Bacterial community structures associated with a natural spring phytoplankton bloom in the Yellow Sea, China

  2013cites this paper
• Are we aware of microbial hotspots in our household?

  2012cites this paper
• Specific association between bacteria and buoyant Microcystis colonies compared with other bulk bacterial communities in the eutrophic Lake Taihu, China.

  2012cites this paper
• Do human activities affect the picoplankton structure of the Ahe atoll lagoon (Tuamotu Archipelago, French Polynesia)?

  2012cites this paper
• Effect of temperature on biogeochemistry of marine organic-enriched systems: implications in a global warming scenario.

  2011cites this paper
• The direct role of enzyme hydrolysis on ammonium regeneration rates in estuarine sediments

  2011cites this paper
• Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities.

  2011cites this paper
• Wetland response to sedimentation and nitrogen loading: diversification and inhibition of nitrogen-fixing microbes.

  2010cites this paper
• Activity and Kinetics of Microbial Extracellular Enzymes in Organic- Poor Sands of a South Texas Estuary

  2009cites this paper
• Eutrophication science: where do we go from here?

  2009cites this paper
• Reeds as indicators of nutrient enrichment in the East Kleinemonde Estuary

  2009cites this paper
• Effects of sewage discharges on microbial components in tropical coastal waters (Senegal, West Africa)

  2008cites this paper
• Particle-attached and free-living bacterial communities in a contrasting marine environment: Victoria Harbor, Hong Kong.

  2007cites this paper
• PHYTOPLANKTON INDICATORS OF ECOLOGICAL CHANGE IN THE EUTROPHYING PAMLICO SOUND SYSTEM, NORTH CAROLINA

  2007cites this paper
• Particle-attachedand free-living bacterial communities ina contrastingmarine environment : VictoriaHarbor , HongKong

  2007cites this paper
• Bacterial abundance and aerobic microbial activity across natural and oyster aquaculture habitats during summer conditions in a northeastern Pacific estuary

  2007cites this paper
• Bacterial diversity, composition and dynamics in and around recreational coastal areas.

  2007cites this paper
• Effects on the function of three trophic levels in marine plankton communities under stress from the antifouling compound zinc pyrithione.

  2006cites this paper
• Ecological Thresholds: The Key to Successful Environmental Management or an Important Concept with No Practical Application?

  2006cites this paper
• Assessing and managing nutrient-enhanced eutrophication in estuarine and coastal waters: Interactive effects of human and climatic perturbations

  2006cites this paper
• Controlled Drainage and Nutrient Management Planning Reduce Drainage Outflow and Nitrogen Transport

  2006cites this paper
• Response of cyanobacterial mats to nutrient and salinity changes

  2005cites this paper
• Impact des apports en nutriments sur le réseau trophique planctonique du lagon sud-ouest de Nouvelle-Calédonie

  2005cites this paper
• Effects of cooling water discharge from a thermoelectric power plant on the nutrient and phytoplankton dynamics in Port Moody Arm, British Columbia, Canada

  2005cites this paper
• SMELTZ, HEATHER L. Water Quality Assessment of a Degraded Stream Prior to Restoration and Nitrate Reduction through Controlled Drainage (under the direction of

  2004influential citation
• Solving problems resulting from solutions: evolution of a dual nutrient management strategy for the eutrophying Neuse River Estuary, North Carolina.

  2004cites this paper
• Rationale for a New Generation of Indicators for Coastal Waters

  2004cites this paper
• The Estuarine and Great Lakes (EaGLe) Coastal Indicators Program: Centers Developing the Next Generation of Indicators

  2003cites this paper
• Microbial indicators of aquatic ecosystem change: current applications to eutrophication studies.

  2003cites this paper
• Scaling up: the next challenge in environmental microbiology.

  2003cites this paper