Java-based graphical user interface for MRUI, a software package for quantitation of in vivo/medical magnetic resonance spectroscopy signals

No abstract is available for this paper.

• Publication year

  2001

• Venue

  Comput. Biol. Medicine

• Publication date

  2001-07-01

• Fields of study

  Medicine, Computer Science, Engineering

• Identifiers
  DOI 10.1016/S0010-4825(01)00006-3PMID 11334636
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Javaパーフェクトマスター : Programming language

  2003influential reference
• EvIdent: a Java-based fMRI data analysis application

  1999cited by this paper
• Time-domain quantification of series of biomedical magnetic resonance spectroscopy signals.

  1999cited by this paper
• Web-based telemicroscopy.

  1999cited by this paper
• Programming with JFC

  1998cited by this paper
• Up to speed with Swing

  1998influential reference
• The Java class libraries

  1998cited by this paper
• Up to speed with Swing: user interfaces with Java foundation classes

  1998cited by this paper
• From flop to megaflops

  1998cited by this paper
• Using Java for scientific programming and electromagnetics

  1998cited by this paper
• Absolute metabolite quantification by in vivo NMR spectroscopy: V. Multicentre quantitative data analysis trial on the overlapping background problem.

  1998cited by this paper
• Improved method for accurate and efficient quantification of MRS data with use of prior knowledge

  1997cited by this paper
• UML distilled - applying the standard object modeling language

  1997cited by this paper
• Java Threads

  1997cited by this paper
• Java in a Nutshell

  1996cited by this paper
• Background features in magnetic resonance signals: Addressed by SVD-based State space modeling

  1994cited by this paper
• Object-oriented analysis and design

  1992cited by this paper
• SVD-based quantification of magnetic resonance signals

  1992cited by this paper
• Automatic in vivo nmr data processing based on an enhancement procedure and linear prediction method

  1992cited by this paper
• Analysis of NMR Data Using Time Domain Fitting Procedures

  1992cited by this paper
• Object-Oriented Modeling and Design

  1991cited by this paper
• Peripheral arterial occlusive disease: P-31 MR spectroscopy of calf muscle.

  1990cited by this paper
• Accurate quantification of in vivo 31P NMR signals using the variable projection method and prior knowledge

  1988cited by this paper
• Retrieval of frequencies, amplitudes, damping factors, and phases from time-domain signals using a linear least-squares procedure

  1985cited by this paper
• The C Programming Language

  1978cited by this paper
• Computers in Biology and Medicine

  year unknowncited by this paper

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