Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. The avian genome is principally characterized by its constrained size, which predominantly arose because of lineage-specific erosion of repetitive elements, large segmental deletions, and gene loss. Avian genomes furthermore show a remarkably high degree of evolutionary stasis at the levels of nucleotide sequence, gene synteny, and chromosomal structure. Despite this pattern of conservation, we detected many non-neutral evolutionary changes in protein-coding genes and noncoding regions. These analyses reveal that pan-avian genomic diversity covaries with adaptations to different lifestyles and convergent evolution of traits.
Comparative genomics reveals insights into avian genome evolution and adaptation
Guojie Zhang,Cai Li,Qiye Li,Bo Li,D. Larkin,Chul Lee,Jay F. Storz,Agostinho Antunes,Matthew J. Greenwold,Robert W Meredith,A. Ödeen,Jianwei Cui,Qi Zhou,Luohao Xu,Hailin Pan,Zongji Wang,Li-jun Jin,Pei Zhang,Haofu Hu,Wei-wei Yang,Jiang Hu,Jin Xiao,Zhikai Yang,Yang Liu,Qiaolin Xie,Hao Yu,J. Lian,P. Wen,Fang Zhang,Hui Li,Yongli Zeng,Zijun Xiong,Shiping Liu,Long Zhou,Zhiyong Huang,Na An,Jie Wang,Q. Zheng,Yingqi Xiong,Guangbiao Wang,Bosheng Wang,Jingjing Wang,Yu Fan,R. D. da Fonseca,Alonzo Alfaro-Núñez,Mikkel Schubert,L. Orlando,T. Mourier,Jason T. Howard,Ganeshkumar Ganapathy,Andreas R. Pfenning,O. Whitney,M. Rivas,Erina Hara,Julia Smith,M. Farré,Jitendra Narayan,G. Slavov,Michael N Romanov,Rui Borges,J. Machado,Imran Khan,M. Springer,J. Gatesy,F. Hoffmann,J. Opazo,O. Håstad,R. Sawyer,Heebal Kim,Kyu-Won Kim,H. Kim,Seoae Cho,Ning Li,Yinhua Huang,M. Bruford,Xiangjiang Zhan,Andrew Dixon,Mads F. Bertelsen,E. Derryberry,Wesley C. Warren,Richard K. Wilson,Shengbin Li,David A. Ray,R. Green,Stephen J. O’Brien,D. Griffin,Warren E. Johnson,D. Haussler,Oliver A. Ryder,E. Willerslev,G. Graves,P. Alström,J. Fjeldså,D. Mindell,Scott V. Edwards,E. Braun,C. Rahbek,David W. Burt,P. Houde,Yong Zhang,Han Yang,J. Wang,Erich D. Jarvis,M. T. P. Gilbert,J. Wang,Emanuel Maldonado
Published 2014 in Science
ABSTRACT
PUBLICATION RECORD
- Publication year
2014
- Venue
Science
- Publication date
2014-12-12
- Fields of study
Biology, Medicine, Environmental Science
- Identifiers
- External record
- Source metadata
Semantic Scholar, PubMed
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