The polyproline helix type II (PPII) is a regular protein secondary structure with remarkable features. Many studies have highlighted different crucial biological roles supported by this local conformation, e.g. in the interactions between biological macromolecules. Although PPII is less frequently present than regular secondary structures such as canonical alpha helices and beta strands, it corresponds to 3–10% of residues. Up to now, PPII is not assigned by most popular assignment tools, and therefore, remains insufficiently studied. PolyprOnline database is, therefore, dedicated to PPII structure assignment and analysis to facilitate the study of PPII structure and functional roles. This database is freely accessible from www.dsimb.inserm.fr/dsimb_tools/polyproline.
PolyprOnline: polyproline helix II and secondary structure assignment database
Romain Chebrek,Sylvain Léonard,A. D. Brevern,Jean-Christophe Gelly
Published 2014 in Database J. Biol. Databases Curation
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- Publication year
2014
- Venue
Database J. Biol. Databases Curation
- Publication date
2014-11-06
- Fields of study
Biology, Medicine, Computer Science
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- External record
- Source metadata
Semantic Scholar, PubMed
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