Long-timescale motions in glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulation.

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Journal of Molecular Graphics and Modelling

• Publication date

  2015-02-01

• Fields of study

  Medicine, Materials Science, Chemistry

• Identifiers
  DOI 10.1016/j.jmgm.2014.10.016PMID 25437095
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Effect of methanol on the phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations: in quest of the biphasic effect.

  2015cited by this paper
• Effect of the cosolutes trehalose and methanol on the equilibrium and phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations

  2014cited by this paper
• Physico-chemical interactions between compartment-forming lipids and other prebiotically relevant biomolecules

  2014cited by this paper
• Phase-transition properties of glycerol-monopalmitate lipid bilayers investigated by molecular dynamics simulation: influence of the system size and force-field parameters

  2013cited by this paper
• Driving force for crystallization of anionic lipid membranes revealed by atomistic simulations.

  2013cited by this paper
• Dynamics of the gel to fluid phase transformation in unilamellar DPPC vesicles.

  2012cited by this paper
• Architecture, implementation and parallelisation of the GROMOS software for biomolecular simulation

  2012cited by this paper
• New functionalities in the GROMOS biomolecular simulation software

  2012cited by this paper
• Diffusive nature of xenon anesthetic changes properties of a lipid bilayer: molecular dynamics simulations.

  2012cited by this paper
• Cholesterol effect on water permeability through DPPC and PSM lipid bilayers: a molecular dynamics study.

  2011cited by this paper
• New Interaction Parameters for Oxygen Compounds in the GROMOS Force Field: Improved Pure-Liquid and Solvation Properties for Alcohols, Ethers, Aldehydes, Ketones, Carboxylic Acids, and Esters.

  2011cited by this paper
• Enantiomeric segregation in the gel phase of lipid bilayers.

  2011cited by this paper
• Recent development in computer simulations of lipid bilayers

  2011cited by this paper
• Effect of high pressure on fully hydrated DPPC and POPC bilayers.

  2011cited by this paper
• Electroporation of the E. coli and S. Aureus membranes: molecular dynamics simulations of complex bacterial membranes.

  2011cited by this paper
• Interaction of the disaccharides trehalose and gentiobiose with lipid bilayers: a comparative molecular dynamics study.

  2010cited by this paper
• Solvent-exposed tails as prestalk transition states for membrane fusion at low hydration.

  2010cited by this paper
• Simulating the Transition between Gel and Liquid-Crystal Phases of Lipid Bilayers: Dependence of the Transition Temperature on the Hydration Level.

  2010cited by this paper
• Molecular view of cholesterol flip-flop and chemical potential in different membrane environments.

  2009cited by this paper
• Structural characterization on the gel to liquid-crystal phase transition of fully hydrated DSPC and DSPE bilayers.

  2009cited by this paper
• Molecular dynamics simulations of a reversibly folding beta-heptapeptide in methanol: influence of the treatment of long-range electrostatic interactions.

  2009cited by this paper
• Chapter 1 Considerations for Lipid Force Field Development

  2008cited by this paper
• Order parameters and areas in fluid-phase oriented lipid membranes using wide angle X-ray scattering.

  2008cited by this paper
• Effect of trehalose on a phospholipid membrane under mechanical stress.

  2008cited by this paper
• The influence of polyhydroxylated compounds on a hydrated phospholipid bilayer: a molecular dynamics study

  2008cited by this paper
• Chapter 8 Interactions between Small Molecules and Lipid Bilayers

  2008cited by this paper
• Effect of different treatments of long‐range interactions and sampling conditions in molecular dynamic simulations of rhodopsin embedded in a dipalmitoyl phosphatidylcholine bilayer

  2007cited by this paper
• Acyl chain order parameter profiles in phospholipid bilayers: computation from molecular dynamics simulations and comparison with 2H NMR experiments

  2007cited by this paper
• Molecular dynamics simulations of lipid vesicle fusion in atomic detail.

  2007cited by this paper
• Physical properties: structural and physical characteristics

  2007cited by this paper
• Correction of apparent finite size effects in the area per lipid of lipid membranes simulations.

  2006cited by this paper
• Interaction of the sugars trehalose, maltose and glucose with a phospholipid bilayer: a comparative molecular dynamics study.

  2006cited by this paper
• Perturbation of phospholipid bilayer properties by ethanol at a high concentration.

  2006cited by this paper
• Phase transitions of monoglyceride emulsifier systems and pearlescent effects in cosmetic creams studied by 13C NMR spectroscopy and DSC

  2006cited by this paper
• Finite system and periodicity effects in free energy simulations of membrane proteins

  2006cited by this paper
• Mesoscopic models of biological membranes

  2006cited by this paper
• Dynamical motions of lipids and a finite size effect in simulations of bilayers.

  2006cited by this paper
• A molecular dynamics study of the response of lipid bilayers and monolayers to trehalose.

  2005cited by this paper
• Theory of lipid monolayer and bilayer phase transitions: Effect of headgroup interactions

  2005cited by this paper
• Melting of a DPPC lipid bilayer observed with atomic force microscopy and computer simulation

  2005cited by this paper
• Microstructural investigation of monoglyceride-water coagel systems by NMR and CryoSEM.

  2005cited by this paper
• Molecular structure of the lecithin ripple phase.

  2005cited by this paper
• Phase behavior of model lipid bilayers.

  2005cited by this paper
• Molecular dynamics simulations of phospholipid bilayers: Influence of artificial periodicity, system size, and simulation time.

  2005cited by this paper
• Molecular dynamics simulations of the lipid bilayer edge.

  2004cited by this paper
• Under the influence of alcohol: the effect of ethanol and methanol on lipid bilayers.

  2004cited by this paper
• Structural effects of small molecules on phospholipid bilayers investigated by molecular simulations

  2004cited by this paper
• Influence of artificial periodicity and ionic strength in molecular dynamics simulations of charged biomolecules employing lattice-sum methods

  2004cited by this paper
• Interaction of the disaccharide trehalose with a phospholipid bilayer: a molecular dynamics study.

  2004cited by this paper
• Simulating induced interdigitation in membranes.

  2004cited by this paper
• Lipid Bilayers Driven to a Wrong Lane in Molecular Dynamics Simulations by Subtle Changes in Long-Range Electrostatic Interactions

  2004cited by this paper
• Methodological issues in lipid bilayer simulations

  2003cited by this paper
• Effect of molecular chirality on the morphology of biomimetic langmuir monolayers.

  2003cited by this paper
• Analysis and evaluation of channel models: simulations of alamethicin.

  2002cited by this paper
• Rheological characterization, crystallization, and gelation behavior of monoglyceride gels.

  2002cited by this paper
• Nuclear Overhauser enhancement spectroscopy cross-relaxation rates and ethanol distribution across membranes.

  2002cited by this paper
• Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions.

  2002cited by this paper
• Lipid organization and dynamics of the monostearoylglycerol-water system. A 2H NMR study.

  2001cited by this paper
• A macroscopic description of lipid bilayer phase transitions of mixed-chain phosphatidylcholines: chain-length and chain-asymmetry dependence.

  2001cited by this paper
• Low-Frequency Chain Dynamics in Decylammonium Chloride

  2001cited by this paper
• Molecular dynamics generation of nonarbitrary membrane models reveals lipid orientational correlations.

  2000cited by this paper
• Spatial and energetic-entropic decomposition of surface tension in lipid bilayers from molecular dynamics simulations

  2000cited by this paper
• Structure of lipid bilayers.

  2000cited by this paper
• Investigation of the Gel to Coagel Phase Transition in Monoglyceride−Water Systems

  1998cited by this paper
• Adhesion forces of lipids in a phospholipid membrane studied by molecular dynamics simulations.

  1998cited by this paper
• On the relationship between C-C and C-D order parameters and its use for studying the conformation of lipid acyl chains in biomembranes

  1998cited by this paper
• A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems.

  1997cited by this paper
• Transport of long-chain native fatty acids across lipid bilayer membranes indicates that transbilayer flip-flop is rate limiting.

  1997cited by this paper
• Determining ethanol distribution in phospholipid multilayers with MAS-NOESY spectra.

  1997cited by this paper
• The different conformations of the glycerol region of crystalline acylglycerols.

  1996cited by this paper
• Thermodynamic and fluorescence studies of the underlying factors in benzyl alcohol-induced lipid interdigitated phase.

  1996cited by this paper
• Conformational Order of DMPC sn-1 versus sn-2 Chains and Membrane Thickness: An Approach to Molecular Protrusion by Solid State 2H-NMR and Neutron Diffraction

  1996cited by this paper
• The Cell: A Molecular Approach

  1996cited by this paper
• A generalized reaction field method for molecular dynamics simulations

  1995cited by this paper
• Fatty acid flip-flop in phospholipid bilayers is extremely fast.

  1995cited by this paper
• Restatement of order parameters in biomembranes: calculation of C-C bond order parameters from C-D quadrupolar splittings.

  1995cited by this paper
• Alcohol induces interdigitated domains in unilamellar phosphatidylcholine bilayers.

  1994cited by this paper
• Direct NMR evidence for ethanol binding to the lipid-water interface of phospholipid bilayers.

  1994cited by this paper
• Measurement of chain tilt angle in fully hydrated bilayers of gel phase lecithins.

  1993cited by this paper
• Phase behaviour of monoglyceride/water systems

  1993cited by this paper
• Lipid transmembrane asymmetry and flip-flop in biological membranes and in lipid bilayers

  1993cited by this paper
• Crystal structures of membrane lipids.

  1992cited by this paper
• Alcohols dehydrate lipid membranes: an infrared study on hydrogen bonding.

  1992cited by this paper
• Fatty-acid chain tilt angles and directions in dipalmitoyl phosphatidylcholine bilayers.

  1992cited by this paper
• Physical properties of the fluid lipid-bilayer component of cell membranes: a perspective

  1991cited by this paper
• Monoglyceride surface films: Stability and interlayer interactions

  1991cited by this paper
• The interfacial conformation and transbilayer movement of diacylglycerols in phospholipid bilayers.

  1991cited by this paper
• Ethanol induces interdigitated gel phase (LβI) between lamellar gel phase (Lβ′) and ripple phase (Pβ′) in phosphatidylcholine membranes: a scanning density meter study

  1990cited by this paper
• Ethanol induces interdigitated gel phase (L beta I) between lamellar gel phase (L beta') and ripple phase (P beta') in phosphatidylcholine membranes: a scanning density meter study.

  1990cited by this paper
• COMPUTER-SIMULATION OF MOLECULAR-DYNAMICS - METHODOLOGY, APPLICATIONS, AND PERSPECTIVES IN CHEMISTRY

  1990cited by this paper
• Repulsive pressure between monoglyceride bilayers in the lamellar and gel states

  1990cited by this paper
• Lipid regulation of cell membrane structure and function

  1989cited by this paper
• Phase transitions and fatty acid spin label behavior in interdigitated lipid phases induced by glycerol and polymyxin.

  1985cited by this paper
• Uncoupling of the membrane skeleton from the lipid bilayer. The cause of accelerated phospholipid flip-flop leading to an enhanced procoagulant activity of sickled cells.

  1985cited by this paper
• Membrane lipid composition and cellular function.

  1985cited by this paper
• Molecular dynamics with coupling to an external bath

  1984cited by this paper
• Interdigitated hydrocarbon chain packing causes the biphasic transition behavior in lipid/alcohol suspensions.

  1984cited by this paper
• Lateral chain packing in lipids and membranes.

  1984cited by this paper
• Phase transition from an intercalated to a nonintercalated structure in a lipid bilayer

  1982cited by this paper
• Interaction Models for Water in Relation to Protein Hydration

  1981cited by this paper

• Molecular Dynamics Simulations of PAMAM and PPI Dendrimers Using the GROMOS-Compatible 2016H66 Force Field

  2019cites this paper
• A GROMOS-Compatible Force Field for Small Organic Molecules in the Condensed Phase: The 2016H66 Parameter Set.

  2016cites this paper
• Effect of methanol on the phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations: in quest of the biphasic effect.

  2015cites this paper
• Phase-transition properties of glycerol-dipalmitate lipid bilayers investigated using molecular dynamics simulation.

  2015cites this paper
• Effect of the cosolutes trehalose and methanol on the equilibrium and phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations

  2014cites this paper