Phylogenetic analysis reveals a high level of speciation in the Paracoccidioides genus.

No abstract is available for this paper.

• Publication year

  2009

• Venue

  Molecular Phylogenetics and Evolution

• Publication date

  2009-08-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1016/j.ympev.2009.04.005PMID 19376249
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Molecular detection of Paracoccidioides brasiliensis in road-killed wild animals.

  2008cited by this paper
• Evidence for Positive Selection in Putative Virulence Factors within the Paracoccidioides brasiliensis Species Complex

  2008cited by this paper
• Paracoccidioides brasiliensis: phylogenetic and ecological aspects

  2008cited by this paper
• New Paracoccidioides brasiliensis isolate reveals unexpected genomic variability in this human pathogen.

  2008cited by this paper
• Paracoccidioidomycosis in wild monkeys from Paraná State, Brazil

  2007cited by this paper
• Fungi in the Environment: Imaging and modelling of fungi in the environment

  2007cited by this paper
• Fungi in the Environment: Fungal species: thoughts on their recognition, maintenance and selection

  2006cited by this paper
• Cryptic speciation and recombination in the fungus Paracoccidioides brasiliensis as revealed by gene genealogies.

  2006cited by this paper
• Sex increases the efficacy of natural selection in experimental yeast populations

  2005cited by this paper
• The naked-tailed armadillo Cabassous centralis (Miller 1899): a new host to Paracoccidioides brasiliensis. Molecular identification of the isolate.

  2005cited by this paper
• Detection and Selection of Microsatellites in the Genome of Paracoccidioides brasiliensis as Molecular Markers for Clinical and Epidemiological Studies

  2004cited by this paper
• MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

  2004cited by this paper
• The Ajellomycetaceae, a new family of vertebrate-associated Onygenales

  2004cited by this paper
• PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]

  2004cited by this paper
• THE SHAPES OF NEUTRAL GENE GENEALOGIES IN TWO SPECIES: PROBABILITIES OF MONOPHYLY, PARAPHYLY, AND POLYPHYLY IN A COALESCENT MODEL

  2003cited by this paper
• MrBayes 3: Bayesian phylogenetic inference under mixed models

  2003cited by this paper
• Comparison of the Sequences of the Internal Transcribed Spacer Regions and PbGP43 Genes of Paracoccidioides brasiliensis from Patients and Armadillos (Dasypus novemcinctus)

  2003cited by this paper
• Randomly Amplified Polymorphic DNA as a Valuable Tool for Epidemiological Studies of Paracoccidioides brasiliensis

  2003cited by this paper
• High frequency of Paracoccidioides brasiliensis infection in armadillos (Dasypus novemcinctus): an ecological study.

  2003cited by this paper
• A MULTILOCUS GENEALOGICAL APPROACH TO PHYLOGENETIC SPECIES RECOGNITION IN THE MODEL EUKARYOTE NEUROSPORA

  2003cited by this paper
• REPRODUCTIVE ISOLATION AND PHYLOGENETIC DIVERGENCE IN NEUROSPORA: COMPARING METHODS OF SPECIES RECOGNITION IN A MODEL EUKARYOTE

  2003cited by this paper
• Phylogeography of the fungal pathogen Histoplasma capsulatum

  2003cited by this paper
• Molecular and phenotypic description of Coccidioides posadasii sp. nov., previously recognized as the non-California population of Coccidioides immitis

  2002cited by this paper
• A multilocus gene genealogy concordant with host preference indicates segregation of a new species, Magnaporthe oryzae, from M. grisea.

  2002cited by this paper
• Characterization of Paracoccidioides brasiliensis atypical isolates by random amplified polymorphic DNA analysis.

  2002cited by this paper
• Gene order evolution and paleopolyploidy in hemiascomycete yeasts

  2002cited by this paper
• Estimation of nucleotide substitution rates in Eurotiomycete fungi.

  2002cited by this paper
• A multilocus gene genealogy concordant with host preference indicates segregation of a new species, Magnaporthe oryzae, from M. grisea

  2002cited by this paper
• Phylogenetic Analysis of Lacazia loboiPlaces This Previously Uncharacterized Pathogen within the Dimorphic Onygenales

  2001cited by this paper
• Canine paracoccidioidomycosis: a seroepidemiologic study.

  2001cited by this paper
• A test for concordance between the multilocus genealogies of genes and microsatellites in the pathogenic fungus Coccidioides immitis.

  2000cited by this paper
• Comparative morphology of Lacazia loboi (syn. Loboa loboi) in dolphins and humans.

  2000cited by this paper
• The phylogenetics of mycotoxin and sclerotium production in Aspergillus flavus and Aspergillus oryzae.

  2000cited by this paper
• Polymorphism in the Gene Coding for the Immunodominant Antigen gp43 from the Pathogenic FungusParacoccidioides brasiliensis

  2000cited by this paper
• Phylogenetic species recognition and species concepts in fungi.

  2000cited by this paper
• RFLP analysis reveals marked geographical isolation between strains of Paracoccidioides brasiliensis.

  2000cited by this paper
• Electrophoretic karyotype of environmental isolates of Paracoccidioides brasiliensis.

  1999cited by this paper
• Phylogenetic Relationships of Varieties and Geographical Groups of the Human Pathogenic Fungus Histoplasma capsulatum Darling

  1999cited by this paper
• Virulence of Paracoccidioides brasiliensis isolates can be correlated to groups defined by random amplified polymorphic DNA analysis.

  1999cited by this paper
• Structure and Dynamics of Fungal Populations

  1999cited by this paper
• BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT

  1999cited by this paper
• SplitsTree: analyzing and visualizing evolutionary data

  1998cited by this paper
• Isolation of Paracoccidioides brasiliensis from armadillos (Dasypus noveminctus) captured in an endemic area of paracoccidioidomycosis.

  1998cited by this paper
• Electrophoretic Karyotypes and Genome Sizing of the Pathogenic Fungus Paracoccidioides brasiliensis

  1998cited by this paper
• Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus.

  1998cited by this paper
• Electrophoretic karyotype of clinical isolates of Paracoccidioides brasiliensis.

  1997cited by this paper
• Molecular evidence for an ancient duplication of the entire yeast genome

  1997cited by this paper
• Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidioides immitis.

  1997cited by this paper
• The Major Transitions in Evolution

  1997cited by this paper
• Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference

  1996cited by this paper
• Ajellomyces crescens sp. nov., taxonomy of Emmonsia spp., and relatedness with Blastomyces dermatitidis (teleomorph Ajellomyces dermatitidis).

  1996cited by this paper
• Characterization of Paracoccidioides brasiliensis isolates by random amplified polymorphic DNA analysis

  1995cited by this paper
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

  1994cited by this paper
• Paracoccidioidomycosis: an update

  1993cited by this paper
• An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

  1993cited by this paper
• Split decomposition: a new and useful approach to phylogenetic analysis of distance data.

  1992cited by this paper
• Oxford Surveys in Evolutionary Biology

  1991cited by this paper
• Principles of genealogical concordance in species concepts and biological taxonomy

  1990cited by this paper
• Molecular Evolutionary Genetics

  1987cited by this paper
• Pathology of the human pulmonary paracoccidioidomycosis

  1985cited by this paper
• Rapid preparation of DNA from filamentous fungi

  1985cited by this paper
• Estimation of evolutionary distances between homologous nucleotide sequences.

  1981cited by this paper
• Paracoccidioidomycosis (South American Blastomycosis) in a Squirrel Monkey (Saimiri sciureus)

  1977cited by this paper
• Sexual Stage of Histoplasma capsulatum

  1972cited by this paper
• [Intradermal reaction survey with paracoccidioidin and histoplasmin in horses].

  1972cited by this paper
• [The polysaccharidic antigen from Paracoccidioides brasiliensis. Study of the time of cultivation necessary for the preparation of the antigen].

  1969cited by this paper
• Studies on the sexuality of Nannizzia I. Heterothallism vs fertile isolates

  1968cited by this paper
• Blastomyces dermatitidis: Production of the Sextual Stage

  1967cited by this paper
• Paracoccidioides brasiliensis recovered from the intestinal tract of three bats (Artibeus lituratus) in Colombia, S.A.

  1965cited by this paper
• THE SPECIES CONCEPT

  1951cited by this paper

• Genomics of thermally pathogenic dimorphic human fungi: From the mitochondrion to the pangenome

  2026cites this paper
• Paracoccidioidomycosis in the 21st century: Challenges and milestones

  2026cites this paper
• Practical Guidance for Clinical Microbiology Laboratories: Antibody and antigen detection methods for dimorphic fungal infections

  2025cites this paper
• Telomeric assemblies of Paracoccidioides genomes

  2025cites this paper
• Partial Alpha-tubulin gene amplification by Nested PCR as a tool for Paracoccidioides ceti identification.

  2025cites this paper
• Paracoccidioides Species Circulating in the Endemic Area of Rio de Janeiro, Brazil: Updates into Their Genetic Diversity

  2025cites this paper
• In vitro Biofilm Formation and Virulence of Paracoccidioides lutzii (LDR2) in a Galleria mellonella larval model.

  2025cites this paper
• Notes, outline, systematics and phylogeny of hyaline-spored hyphomycetes

  2025cites this paper
• Disseminated paracoccidioidomycosis in a captive western black-handed tamarin (Saguinus niger).

  2024cites this paper
• Applying nanopore sequencing technology in Paracoccidioides sp.: a high-quality DNA isolation method for next-generation genomic studies

  2024cites this paper
• Clinical-epidemiological characteristics of paracoccidioidomycosis and presence of Paracoccidioides spp. in the natural environment in Rio Grande do Sul, southern Brazil: an 81-year literature survey

  2024cites this paper
• Standardization of Semi-Quantitative Dot Blotting Assay—Application in the Diagnosis, Follow-Up, and Relapse of Paracoccidioidomycosis

  2024cites this paper
• Paracoccidioides spp.: escape mechanisms and their implications for the development of this mycosis.

  2024cites this paper
• Comparison between PCR–RFLP and sequencing techniques in the analysis of Paracoccidioides spp. biodiversity: limitations and insights into species and variant differentiation

  2024cites this paper
• MDSCs use a complex molecular network to suppress T-cell immunity in a pulmonary model of fungal infection

  2024cites this paper
• Multiple Tolerization Subtractive Immunization in the Obtention of Specific Monoclonal Antibodies Against Paracoccidioides lutzii

  2024cites this paper
• Talaromyces marneffei, Coccidioides species, and Paracoccidioides species—a systematic review to inform the World Health Organization priority list of fungal pathogens

  2024cites this paper
• The Effect of Geoclimatic Factors on the Distribution of Paracoccidioidomycosis in Mato Grosso do Sul, Brazil

  2024cites this paper
• Identification and immunogenic potential of glycosylphosphatidylinositol-anchored proteins in Paracoccidioides brasiliensis

  2023cites this paper
• A taxonomic review of the genus Paracoccidioides, with focus on the uncultivable species

  2023cites this paper
• Molecular Phylogenetic Analysis of Paracoccidioides Species Complex Present in Paracoccidioidomycosis Patient Tissue Samples

  2023cites this paper
• Antibody Titer Prediction from Serum Immunodiffusion Test of Patients with Paracoccidioidomycosis Using Infrared Spectroscopy and Chemometrics

  2023cites this paper
• Reproducibility of double agar gel immunodiffusion test using stored serum and plasma from paracoccidioidomycosis patients

  2023cites this paper
• Development of a Multiplex qPCR Assay for Fast Detection and Differentiation of Paracoccidioidomycosis Agents

  2023cites this paper
• Diagnosis and Treatment of Pulmonary Coccidioidomycosis and Paracoccidioidomycosis

  2023cites this paper
• Paracoccidioidomycosis cases by Paracoccidioides lutzii in southeastern Brazil

  2023cites this paper
• Structure of glyceraldehyde-3-phosphate dehydrogenase from Paracoccidioides lutzii in complex with an aldonic sugar acid.

  2023cites this paper
• Heterologous overexpression and characterization of homoserine dehydrogenase from Paracoccidioides brasiliensis.

  2023cites this paper
• The story of Paracoccidiodes gp43

  2023cites this paper
• Current Nomenclature of Paracoccidioides lobogeorgii’s Disease Name. Comment on Grotta et al. Fungal Density in Lobomycosis in French Guiana: A Proposal for a New Clinico-Histological and Therapeutic Classification. J. Fungi 2023, 9, 1005

  2023cites this paper
• Paracoccidioides restrepiensis has undergone a severe population bottleneck

  2022cites this paper
• Head and neck manifestations of paracoccidioidomycosis: A retrospective study of histopathologically diagnosed cases in two medical centers in southern Brazil.

  2022cites this paper
• Paracoccidioidomycosis: Current Status and Future Trends

  2022cites this paper
• Combined Silymarin and Cotrimoxazole Therapy Attenuates Pulmonary Fibrosis in Experimental Paracoccidioidomycosis

  2022cites this paper
• Paracoccidioidomycosis: What We Know and What Is New in Epidemiology, Diagnosis, and Treatment

  2022cites this paper
• Paracoccidioides brasiliensis Releases a DNase-Like Protein That Degrades NETs and Allows for Fungal Escape

  2021cites this paper
• Updates in Paracoccidioides Biology and Genetic Advances in Fungus Manipulation

  2021cites this paper
• Paracoccidioides brasiliensis Isolated from Nine-Banded Armadillos (Dasypus novemcinctus) Reveal Population Structure and Admixture in the Amazon Basin

  2021cites this paper
• One Century of Study: What We Learned about Paracoccidioides and How This Pathogen Contributed to Advances in Antifungal Therapy

  2021cites this paper
• Paracoccidioimycosis and white individuals: Susceptibility and biogeographic aspects in an important endemic area in Brazil

  2021cites this paper
• Interacting with Hemoglobin: Paracoccidioides spp. Recruits hsp30 on Its Cell Surface for Enhanced Ability to Use This Iron Source

  2021cites this paper
• Current Status on Extracellular Vesicles from the Dimorphic Pathogenic Species of Paracoccidioides.

  2021cites this paper
• In Vitro and In Vivo Effect of Peptides Derived from 14-3-3 Paracoccidioides spp. Protein

  2021cites this paper
• A New Duplex PCR-Assay for the Detection and Identification of Paracoccidioides Species

  2021cites this paper
• Molecular epidemiology of Paracoccidiodes spp. recovered from patients with paracoccidioidomycosis in a teaching hospital from Minas Gerais State of Brazil

  2021cites this paper
• Epidemiology of paracoccidioidomycosis in Venezuela: a retrospective study from 1954 to 2019

  2021cites this paper
• PbGP43 Genotyping Using Paraffin-Embedded Biopsies of Human Paracoccidioidomycosis Reveals a Genetically Distinct Lineage in the Paracoccidioides brasiliensis Complex

  2021cites this paper
• Exploring genetic diversity, population structure, and phylogeography in Paracoccidioides species using AFLP markers

  2021cites this paper
• The taxonomy of two uncultivated fungal mammalian pathogens is revealed through phylogeny and population genetic analyses

  2021cites this paper
• Differentially expressed proteins in the interaction of Paracoccidioides lutzii with human monocytes.

  2021cites this paper
• Identification of Potentially Therapeutic Immunogenic Peptides From Paracoccidioides lutzii Species

  2021cites this paper
• Distinct Pattern of Paracoccidioides lutzii, P. restrepiensis and P. americana Antigens Recognized by IgE in Human Paracoccidioidomycosis

  2021cites this paper
• An update on the occurrence of Paracoccidioides species in the Midwest region, Brazil: Molecular epidemiology, clinical aspects and serological profile of patients from Mato Grosso do Sul State

  2021cites this paper
• Paracoccidioidomycosis due to P lutzii: The importance of neutrophil/lymphocyte ratio in the symptomatic and asymptomatic phases in severe cases

  2021cites this paper
• Puzzling paracoccidioidomycosis - Factors associated with the severity of Paracoccidioides lutzii infections.

  2021cites this paper
• Screening paracoccidioidomycosis by double immunodiffusion test in a referred diagnostic center in Brazilian southeastern: an accessible tool

  2021cites this paper
• Proteomic analysis of serum samples of paracoccidioidomycosis patients with severe pulmonary sequel

  2021cites this paper
• Compulsory notification of paracoccidioidomycosis: A 14‐year retrospective study of the disease in the state of Paraná, Brazil

  2021cites this paper
• Speciation across the Tree of Life

  2021cites this paper
• Immunoproteomic Approach of Extracellular Antigens From Paracoccidioides Species Reveals Exclusive B-Cell Epitopes

  2020cites this paper
• New Insights on Pulmonary Paracoccidioidomycosis

  2020cites this paper
• Immunoproteomic Analysis Reveals Novel Candidate Antigens for the Diagnosis of Paracoccidioidomycosis Due to Paracoccidioides lutzii

  2020cites this paper
• Beyond Melanin: Proteomics Reveals Virulence-Related Proteins in Paracoccidioides brasiliensis and Paracoccidioides lutzii Yeast Cells Grown in the Presence of L-Dihydroxyphenylalanine

  2020cites this paper
• Melanin as a Virulence Factor in Different Species of Genus Paracoccidioides

  2020cites this paper
• Molecular Tools for Detection and Identification of Paracoccidioides Species: Current Status and Future Perspectives

  2020cites this paper
• IgG reactivity profile to Paracoccidioides spp. antigens in people with asymptomatic Paracoccidioidomycosis.

  2020cites this paper
• Paracoccin overexpression in Paracoccidioides brasiliensis enhances fungal virulence by remodeling chitin properties of the cell wall.

  2020cites this paper
• Evaluation of antifibrotic and antifungal combined therapies in experimental pulmonary paracoccidioidomycosis.

  2020cites this paper
• Exoantigens of Paracoccidioides spp. Promote Proliferation and Modulation of Human and Mouse Pulmonary Fibroblasts

  2020cites this paper
• Antifungal activity of liriodenine on agents of systemic mycoses, with emphasis on the genus Paracoccidioides

  2020cites this paper
• Paracoccidioidomycosis due to Paracoccidioides lutzii complicated with adrenal injury and pulmonary arterial hypertension

  2020cites this paper
• Comparison of clinico-epidemiological and radiological features in paracoccidioidomycosis patients regarding serological classification using antigens from Paracoccidioides brasiliensis complex and Paracoccidioides lutzii

  2020influential citation
• Proteome characterization of Paracoccidioides lutzii conidia by using nanoUPLC-MSE.

  2020cites this paper
• Fungal-host interactions: insights into microRNA in response to Paracoccidioides species

  2020cites this paper
• Genomic diversity of the human pathogen Paracoccidioides across the South American continent.

  2020cites this paper
• Characterization of a Paracoccidioides spp. strain from southeastern Brazil genotyped as Paracoccidioides restrepiensis (PS3) and review of this phylogenetic species

  2020influential citation
• Phylogenetic Species of Paracoccidioides spp. Isolated from Clinical and Environmental Samples in a Hyperendemic Area of Paracoccidioidomycosis in Southeastern Brazil

  2020cites this paper
• Therapeutic Vaccination with Cationic Liposomes Formulated with Dioctadecyldimethylammonium and Trehalose Dibehenate (CAF01) and Peptide P10 Is Protective in Mice Infected with Paracoccidioides brasiliensis

  2020cites this paper
• Paracoccidioides Genomes Reflect High Levels of Species Divergence and Little Interspecific Gene Flow

  2020cites this paper
• Immunotherapy against Systemic Fungal Infections Based on Monoclonal Antibodies

  2020cites this paper
• 43 kDa Glycoprotein (gp43) from Paracoccidioides brasiliensis Induced IL-17A and PGE2 Production by Human Polymorphonuclear Neutrophils: Involvement of TLR2 and TLR4

  2019cites this paper
• Paracoccidioides species present distinct fungal adherence to epithelial lung cells and promote different IL-8 secretion levels

  2019cites this paper
• Detection of antibodies anti-gp43 of Paracoccidioides brasiliensis in sera samples by double-sandwich ELISA

  2019cites this paper
• ParaDB: A manually curated database containing genomic annotation for the human pathogenic fungi Paracoccidioides spp.

  2019cites this paper
• Proteomic Analysis of Paracoccidioides brasiliensis During Infection of Alveolar Macrophages Primed or Not by Interferon-Gamma

  2019cites this paper
• Different DNA methylation profile is demonstrated in paracoccidioidomycosis patients without oral lesions

  2019cites this paper
• Metabolic Peculiarities of Paracoccidioides brasiliensis Dimorphism as Demonstrated by iTRAQ Labeling Proteomics

  2019cites this paper
• New 4-methoxy-naphthalene derivatives as promisor antifungal agents for paracoccidioidomycosis treatment.

  2019cites this paper
• Contributions of bioinformatics to study natural antifungals: review in a pharmacological context

  2019cites this paper
• Clinical features and genetic background of the sympatric species Paracoccidioides brasiliensis and Paracoccidioides americana

  2019cites this paper
• Oral Signs of Tropical, Fungal, and Parasitic Diseases

  2019cites this paper
• Paracoccidioides spp. in Soil from the Pampa Biome in Southern Brazil

  2019cites this paper
• Social, environmental and microbiologic aspects of endemic mycoses in Brazil

  2019cites this paper
• Identification and characterization of Paracoccidioides lutzii proteins interacting with macrophages.

  2019cites this paper
• Paracoccin overexpression in Paracoccidioides brasiliensis reveals the influence of chitin hydrolysis on fungal virulence and host immune response

  2019cites this paper
• Mating type (MAT) locus and possible sexuality of the opportunistic pathogen Exophiala dermatitidis.

  2019cites this paper
• TLR3 Is a Negative Regulator of Immune Responses Against Paracoccidioides brasiliensis

  2019cites this paper
• Clinical and epidemiological features of paracoccidioidomycosis due to Paracoccidioides lutzii

  2019cites this paper
• UNIVERSIDADE DE SÃO PAULO FACULDADE DE MEDICINA DE RIBEIRÃO PRETO DEPARTAMENTO DE BIOLOGIA CELULAR E MOLECULAR Development of synthetic biology tools applied to fungi of medical and industrial importance

  2018cites this paper
• Effect of ArtinM on Human Blood Cells During Infection With Paracoccidioides brasiliensis

  2018cites this paper