Thermodynamics of trimer-of-hairpins formation by the SIV gp41 envelope protein.

No abstract is available for this paper.

• Publication year

  2001

• Venue

  Journal of Molecular Biology

• Publication date

  2001-03-23

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1006/JMBI.2001.4469PMID 11254387
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Unfolding thermodynamics of the tetrameric chaperone, SecB.

  2000cited by this paper
• Buried polar interactions and conformational stability in the simian immunodeficiency virus (SIV) gp41 core.

  2000cited by this paper
• The energetics of HMG box interactions with DNA: thermodynamics of the DNA binding of the HMG box from mouse sox-5.

  1999cited by this paper
• Monomer‐trimer equilibrium of the ectodomain of SIV gp41: Insight into the mechanism of peptide inhibition of HIV infection

  1999cited by this paper
• Inhibiting HIV-1 entry: discovery of D-peptide inhibitors that target the gp41 coiled-coil pocket.

  1999cited by this paper
• Trimerization specificity in HIV-1 gp41: analysis with a GCN4 leucine zipper model.

  1999cited by this paper
• The energetics of HMG box interactions with DNA: thermodynamic description of the target DNA duplexes.

  1999cited by this paper
• Stability of a homo-dimeric Ca(2+)-binding member of the beta gamma-crystallin superfamily: DSC measurements on spherulin 3a from Physarum polycephalum.

  1999cited by this paper
• Subdomain Folding and Biological Activity of the Core Structure from Human Immunodeficiency Virus Type 1 gp41: Implications for Viral Membrane Fusion

  1999cited by this paper
• HIV-1 entry inhibitors in the side pocket.

  1999cited by this paper
• Selection of gp41-mediated HIV-1 cell entry inhibitors from biased combinatorial libraries of non-natural binding elements

  1999cited by this paper
• Contribution of Translational and Rotational Entropy to the Unfolding of a Dimeric Coiled-Coil

  1999cited by this paper
• Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease.

  1999cited by this paper
• Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).

  1999cited by this paper
• The crystal structure of the SIV gp41 ectodomain at 1.47 A resolution.

  1999cited by this paper
• Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody

  1998cited by this paper
• A Conformation-Specific Monoclonal Antibody Reacting with Fusion-Active gp41 from the Human Immunodeficiency Virus Type 1 Envelope Glycoprotein

  1998cited by this paper
• A helix propensity scale based on experimental studies of peptides and proteins.

  1998cited by this paper
• Conformational Changes in Cell Surface HIV-1 Envelope Glycoproteins Are Triggered by Cooperation between Cell Surface CD4 and Co-receptors*

  1998cited by this paper
• Potent suppression of HIV-1 replication in humans by T-20, a peptide inhibitor of gp41-mediated virus entry

  1998cited by this paper
• Capture of an early fusion-active conformation of HIV-1 gp41

  1998cited by this paper
• HIV entry and its inhibition.

  1998cited by this paper
• Three‐dimensional solution structure of the 44 kDa ectodomain of SIV gp41

  1998cited by this paper
• Coiled coils in both intracellular vesicle and viral membrane fusion.

  1998cited by this paper
• Dilation of the Human Immunodeficiency Virus–1 Envelope Glycoprotein Fusion Pore Revealed by the Inhibitory Action of a Synthetic Peptide from gp41

  1998cited by this paper
• The structural stability of the HIV-1 protease.

  1998cited by this paper
• Monitoring the sizes of denatured ensembles of staphylococcal nuclease proteins: implications regarding m values, intermediates, and thermodynamics.

  1998cited by this paper
• A conserved HIV gp120 glycoprotein structure involved in chemokine receptor binding.

  1998cited by this paper
• Nine hydrophobic side chains are key determinants of the thermodynamic stability and oligomerization status of tumour suppressor p53 tetramerization domain

  1998cited by this paper
• Thermodynamics and kinetics of unfolding of the thermostable trimeric adenylate kinase from the archaeon Sulfolobus acidocaldarius.

  1998cited by this paper
• Crystal structure of the simian immunodeficiency virus (SIV) gp41 core: conserved helical interactions underlie the broad inhibitory activity of gp41 peptides.

  1998cited by this paper
• Thermodynamic stability of archaeal histones.

  1998cited by this paper
• Atomic structure of the ectodomain from HIV-1 gp41

  1997cited by this paper
• The structural stability of the co-chaperonin GroES.

  1997cited by this paper
• Ferredoxin from the hyperthermophile Thermotoga maritima is stable beyond the boiling point of water.

  1997cited by this paper
• Enveloped viruses: a common mode of membrane fusion?.

  1997cited by this paper
• Atomic structure of a thermostable subdomain of HIV-1 gp41.

  1997cited by this paper
• Conformational stability of pGEX‐expressed Schistosoma japonicum glutathione S‐transferase: A detoxification enzyme and fusion‐protein affinity tag

  1997cited by this paper
• Influenza hemagglutinin is spring-loaded by a metastable native conformation.

  1997cited by this paper
• A new ultrasensitive scanning calorimeter.

  1997cited by this paper
• Stability of aspartate aminotransferase from Sulfolobus solfataricus.

  1997cited by this paper
• Core structure of gp41 from the HIV envelope glycoprotein.

  1997cited by this paper
• A trimeric structural subdomain of the HIV-1 transmembrane glycoprotein.

  1997cited by this paper
• Thermodynamic characterization of the coupled folding and association of heterodimeric coiled coils (leucine zippers).

  1996cited by this paper
• Thermodynamic studies of the core histones: pH and ionic strength effects on the stability of the (H3-H4)/(H3-H4)2 system.

  1996cited by this paper
• Hyperthermophile protein folding thermodynamics: differential scanning calorimetry and chemical denaturation of Sac7d.

  1996cited by this paper
• Energetics of protein structure.

  1995cited by this paper
• Energetic contribution of side chain hydrogen bonding to the stability of staphylococcal nuclease.

  1995cited by this paper
• A soluble domain of the membrane-anchoring chain of influenza virus hemagglutinin (HA2) folds in Escherichia coli into the low-pH-induced conformation.

  1995cited by this paper
• The heat capacity of proteins

  1995cited by this paper
• A trimeric structural domain of the HIV-1 transmembrane glycoprotein

  1995cited by this paper
• Thermodynamic studies of the core histones: ionic strength and pH dependence of H2A-H2B dimer stability.

  1995cited by this paper
• A trimeric subdomain of the simian immunodeficiency virus envelope glycoprotein.

  1995cited by this paper
• Protein stability as a function of denaturant concentration: the thermal stability of barnase in the presence of urea.

  1995cited by this paper
• Effects of cavity‐creating mutations on conformational stability and structure of the dimeric 4‐α‐helical protein ROP: Thermal unfolding studies

  1995cited by this paper
• Thermodynamic analysis of the structural stability of the tetrameric oligomerization domain of p53 tumor suppressor.

  1995cited by this paper
• Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding

  1995cited by this paper
• Protein stability effects of a complete set of alanine substitutions in Arc repressor

  1994cited by this paper
• The contribution of vibrational entropy to molecular association. The dimerization of insulin.

  1994cited by this paper
• Thermal unfolding of tetrameric melittin: Comparison with the molten globule state of cytochrome c

  1994cited by this paper
• Entropy in biological binding processes: Estimation of translational entropy loss

  1994cited by this paper
• Coupling of local folding to site-specific binding of proteins to DNA.

  1994cited by this paper
• Structure of influenza haemagglutinin at the pH of membrane fusion

  1994cited by this paper
• A spring-loaded mechanism for the conformational change of influenza hemagglutinin.

  1993cited by this paper
• Energetic cost and structural consequences of burying a hydroxyl group within the core of a protein determined from Ala-->Ser and Val-->Thr substitutions in T4 lysozyme.

  1993cited by this paper
• Subunit interactions provide a significant contribution to the stability of the dimeric four-alpha-helical-bundle protein ROP.

  1993cited by this paper
• Thermodynamic characterization of the structural stability of the coiled-coil region of the bZIP transcription factor GCN4.

  1993cited by this paper
• A test of the linear extrapolation of unfolding free energy changes over an extended denaturant concentration range.

  1992cited by this paper
• Synthetic model proteins: the relative contribution of leucine residues at the nonequivalent positions of the 3-4 hydrophobic repeat to the stability of the two-stranded alpha-helical coiled-coil.

  1992cited by this paper
• The folding of an enzyme. II. Substructure of barnase and the contribution of different interactions to protein stability.

  1992cited by this paper
• Lipid interactions of the hemagglutinin HA2 NH2-terminal segment during influenza virus-induced membrane fusion.

  1992cited by this paper
• Synthetic model proteins. Positional effects of interchain hydrophobic interactions on stability of two-stranded alpha-helical coiled-coils.

  1992cited by this paper
• Analytical ultracentrifugation in biochemistry and polymer science

  1992cited by this paper
• Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein folding from the removal of nonpolar and polar surface from water.

  1992cited by this paper
• Contribution of hydrogen bonding to the conformational stability of ribonuclease T1.

  1992cited by this paper
• Protein interactions with urea and guanidinium chloride. A calorimetric study.

  1992cited by this paper
• Mutations in the leucine zipper of the human immunodeficiency virus type 1 transmembrane glycoprotein affect fusion and infectivity

  1992cited by this paper
• The HA2 subunit of influenza hemagglutinin inserts into the target membrane prior to fusion.

  1991cited by this paper
• A program to produce both detailed and schematic plots of protein structures

  1991cited by this paper
• Heat capacity of proteins. I. Partial molar heat capacity of individual amino acid residues in aqueous solution: hydration effect.

  1990cited by this paper
• Retroviral Envelope Glycoproteins Contain a "Leucine Zipper"-like Repeat

  1990cited by this paper
• Heptad repeat sequences are located adjacent to hydrophobic regions in several types of virus fusion glycoproteins.

  1990cited by this paper
• Use of T7 RNA polymerase to direct expression of cloned genes.

  1990cited by this paper
• Retrovirus envelope glycoproteins.

  1990cited by this paper
• A General Model for the Transmembrane Proteins of HIV and Other Retroviruses

  1989cited by this paper
• Equilibrium dissociation and unfolding of the Arc repressor dimer.

  1989cited by this paper
• Statistical thermodynamic analysis of the heat capacity function associated with protein folding-unfolding transitions

  1989cited by this paper
• Dependence of conformational stability on hydrophobicity of the amino acid residue in a series of variant proteins substituted at a unique position of tryptophan synthase alpha subunit.

  1987cited by this paper
• Rapid and efficient site-specific mutagenesis without phenotypic selection.

  1987cited by this paper
• Protein stability curves

  1987cited by this paper
• Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

  1987cited by this paper
• Scanning microcalorimetry in studying temperature-induced changes in proteins.

  1986cited by this paper
• Rapid and efficient site-specific mutagenesis without phenotypic selection.

  1985cited by this paper
• Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques.

  1981cited by this paper
• Spectroscopic determination of tryptophan and tyrosine in proteins.

  1967cited by this paper

• On the Sensitivity of the Virion Envelope to Lipid Peroxidation

  2022cites this paper
• Common Energetic and Mechanical Features of Membrane Fusion and Fission Machineries

  2018cites this paper
• Interhelical Packing Interactions in the gp 41 Core are Critical for Transition of the Human Immunodeficiency Virus Type 1 Envelope Glycoprotein to the Fusion-Active State

  2017cites this paper
• Swapped-domain constructs of the glycoprotein-41 ectodomain are potent inhibitors of HIV infection.

  2015cites this paper
• Kinetically coupled folding of a single HIV-1 glycoprotein 41 complex in viral membrane fusion and inhibition

  2015cites this paper
• Energetics of oligomeric protein folding and association.

  2013cites this paper
• Probing the energetic and kinetic impact of topologically conserved interactions in the SIV gp41 six-helix bundle.

  2013cites this paper
• Marburg virus glycoprotein GP2: pH-dependent stability of the ectodomain α-helical bundle.

  2012cites this paper
• Is there a future for antiviral fusion inhibitors?

  2012cites this paper
• Designed protein mimics of the Ebola virus glycoprotein GP2 α-helical bundle: Stability and pH effects

  2011cites this paper
• A polypeptide "building block" for the β-trefoil fold identified by "top-down symmetric deconstruction".

  2011cites this paper
• Human endogenous retroviruses and immune tolerance in pregnancy

  2011cites this paper
• Stability of gp41 hairpin and helix bundle assembly probed by combined stacking and circular dichroic approaches.

  2011cites this paper
• The role of a hydrophobic cluster for stability and assembly kinetics of the trimeric foldon domain from T4 fibritin

  2011cites this paper
• Inhibition of HIV-1 by fusion inhibitors.

  2010cites this paper
• The Six-Helix Bundle of Human Immunodeficiency Virus Env Controls Pore Formation and Enlargement and Is Initiated at Residues Proximal to the Hairpin Turn

  2009cites this paper
• Folding and association of thermophilic dimeric and trimeric DsrEFH proteins: Tm0979 and Mth1491.

  2009cites this paper
• Selection of T1249-Resistant Human Immunodeficiency Virus Type 1 Variants

  2008cites this paper
• Second site escape of a T20-dependent HIV-1 variant by a single amino acid change in the CD4 binding region of the envelope glycoprotein

  2006cites this paper
• Thermostability of the HIV gp41 wild-type and loop mutations.

  2006cites this paper
• Distinct Early Folding and Aggregation Properties of Alzheimer Amyloid-β Peptides Aβ40 and Aβ42

  2006cites this paper
• Distinct early folding and aggregation properties of Alzheimer amyloid-beta peptides Abeta40 and Abeta42: stable trimer or tetramer formation by Abeta42.

  2006cites this paper
• Energetics of membrane protein folding and stability.

  2006cites this paper
• Toward the elucidation of the structural determinants responsible for the molecular recognition between Mad1 and Max.

  2005cites this paper
• A survey of flexible protein binding mechanisms and their transition states using native topology based energy landscapes.

  2005cites this paper
• The Energetics of Membrane Fusion from Binding, through Hemifusion, Pore Formation, and Pore Enlargement

  2004cites this paper
• Role of Hydrophobic Residues in the Central Ectodomain of gp41 in Maintaining the Association between Human Immunodeficiency Virus Type 1 Envelope Glycoprotein Subunits gp120 and gp41

  2004cites this paper
• A single amino acid change in gp41 is linked to the macrophage-only replication phenotype of a molecular clone of simian immunodeficiency virus derived from the brain of a macaque with neuropathogenic infection.

  2004cites this paper
• Emergence of a Drug-Dependent Human Immunodeficiency Virus Type 1 Variant during Therapy with the T20 Fusion Inhibitor

  2004cites this paper
• Fast folding of the HIV-1 and SIV gp41 six-helix bundles.

  2004cites this paper
• HIV-1 gp41 and gp160 are hyperthermostable proteins in a mesophilic environment. Characterization of gp41 mutants.

  2004cites this paper
• The stability of the intact envelope glycoproteins is a major determinant of sensitivity of HIV/SIV to peptidic fusion inhibitors.

  2004cites this paper
• Specific control of peptide assembly with combined hydrophilic and hydrophobic interfaces.

  2003cites this paper
• Structural insights into the SNARE mechanism.

  2003cites this paper
• Interhelical interactions in the gp41 core: implications for activation of HIV-1 membrane fusion.

  2002cites this paper
• Membrane fusion: the process and its energy suppliers

  2002cites this paper
• Stabilization of the Soluble, Cleaved, Trimeric Form of the Envelope Glycoprotein Complex of Human Immunodeficiency Virus Type 1

  2002cites this paper
• Improvement in adenoviral gene transfer efficiency after preincubation at +37 degrees C in vitro and in vivo.

  2002cites this paper
• Peptide tic-tac-toe: heterotrimeric coiled-coil specificity from steric matching of multiple hydrophobic side chains.

  2002cites this paper
• Improvement in Adenoviral Gene Transfer Efficiency after Preincubation at +37°C in Vitro and in Vivo

  2002cites this paper
• Core side-chain packing and backbone conformation in Lpp-56 coiled-coil mutants.

  2002cites this paper
• Genetic Evidence that Interhelical Packing Interactions in the gp41 Core Are Critical for Transition of the Human Immunodeficiency Virus Type 1 Envelope Glycoprotein to the Fusion-Active State

  2002cites this paper
• Mutations That Destabilize the gp41 Core Are Determinants for Stabilizing the Simian Immunodeficiency Virus-CPmac Envelope Glycoprotein Complex*

  2002cites this paper
• Thermal denaturation of influenza virus and its relationship to membrane fusion.

  2002cites this paper
• Comparison of Predicted Scaffold-Compatible Sequence Variation in the Triple-Hairpin Structure of Human Immunodeficiency Virus Type 1 gp41 with Patient Data

  2002cites this paper
• The mechanism of inhibition of HIV-1 env-mediated cell-cell fusion by recombinant cores of gp41 ectodomain.

  2002cites this paper
• Structural and Functional Analysis of Interhelical Interactions in the Human Immunodeficiency Virus Type 1 gp41 Envelope Glycoprotein by Alanine-Scanning Mutagenesis

  2001cites this paper