Late Pleistocene divergence and subsequent population expansion of two closely related fish species, Japanese anchovy (Engraulis japonicus) and Australian anchovy (Engraulis australis).

No abstract is available for this paper.

• Publication year

  2006

• Venue

  Molecular Phylogenetics and Evolution

• Publication date

  2006-09-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1016/J.YMPEV.2006.04.019PMID 16777438
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Signature of an early genetic bottleneck in a population of Moroccan sardines (Sardina pilchardus).

  2006cited by this paper
• Molecular genetic assessment of bipolarity in the anchovy genus Engraulis

  2005cited by this paper
• Living with uncertainty: genetic imprints of climate shifts in East Pacific anchovy (Engraulis mordax) and sardine (Sardinops sagax)

  2004cited by this paper
• Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite‐island model

  2004cited by this paper
• Intra-deme molecular diversity in spatially expanding populations.

  2003cited by this paper
• Environmental ‘loopholes’ and fish population dynamics: comparative pattern recognition with focus on El Niño effects in the Pacific

  2003cited by this paper
• Origin and speciation of haplochromine fishes in East African crater lakes investigated by the analysis of their mtDNA, Mhc genes, and SINEs.

  2003cited by this paper
• Recruitment, sustainable yield and possible ecological consequences of the sharp decline of the anchovy (Engraulis japonicus) stock in the Yellow Sea in the 1990s

  2003cited by this paper
• From Anchovies to Sardines and Back: Multidecadal Change in the Pacific Ocean

  2003cited by this paper
• Spatial and temporal variability of surface water in the Kuroshio source region, Pacific Ocean, over the past 21,000 years: evidence from planktonic foraminifera

  2003cited by this paper
• Population genetics of the endangered Knysna seahorse, Hippocampus capensis

  2003cited by this paper
• Links between climate and sea levels for the past three million years

  2002cited by this paper
• Ocean circulation and climate during the past 120,000 years

  2002cited by this paper
• Population genetics of shortnose sturgeon Acipenser brevirostrum based on mitochondrial DNA control region sequences

  2002cited by this paper
• Genetic Analysis of the Populations of Japanese Anchovy (Engraulidae: Engraulis japonicus) Using Microsatellite DNA

  2002cited by this paper
• MEGA2: molecular evolutionary genetics analysis software

  2001cited by this paper
• Genetic evidence against panmixia in the European eel

  2001cited by this paper
• Late Pliocene–early Pleistocene paleoceanographic evolution of the Sea of Japan

  2001cited by this paper
• Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus

  2001cited by this paper
• Lake level fluctuations synchronize genetic divergences of cichlid fishes in African lakes.

  2001cited by this paper
• Molecular Cloning: A Laboratory Manual

  2001cited by this paper
• HOLARCTIC PHYLOGEOGRAPHY OF ARCTIC CHARR (SALVELINUS ALPINUS L.) INFERRED FROM MITOCHONDRIAL DNA SEQUENCES

  2001cited by this paper
• Genetic perspectives on human origins and differentiation.

  2000cited by this paper
• Phylogeny and biogeographic history of hake (genus Merluccius), inferred from mitochondrial DNA control-region sequences

  2000cited by this paper
• The genetic legacy of the Quaternary ice ages

  2000cited by this paper
• Phylogeography: The History and Formation of Species

  2000cited by this paper
• Differences between Pagrus major and Pagrus auratus through mainly mtDNA control region analysis

  2000cited by this paper
• Small pelagics in upwelling systems: patterns of interaction and structural changes in "wasp-waist" ecosystems

  2000cited by this paper
• Median networks: speedy construction and greedy reduction, one simulation, and two case studies from human mtDNA.

  2000cited by this paper
• Evolutionary consequences of changes in species' geographical distributions driven by Milankovitch climate oscillations.

  2000cited by this paper
• Worldwide large-scale fluctuations of sardine and anchovy populations

  1999cited by this paper
• Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA.

  1999cited by this paper
• Climate and atmospheric history of the past 420,000 years from the Vostok ice core, Antarctica

  1999cited by this paper
• Response of Western Pacific marginal seas to glacial cycles: paleoceanographic and sedimentological features

  1999cited by this paper
• Change in the thickness of the warm Tsushima Current at the initiation of its flow into the Sea of Japan

  1999cited by this paper
• Amphi-panamic geminates of snook (Percoidei: Centropomidae) provide a calibration of the divergence rate in the mitochondrial DNA control region of fishes.

  1999cited by this paper
• Late Quaternary course changes of the Kuroshio Current in the Ryukyu Arc region, northwestern Pacific Ocean

  1999cited by this paper
• Surface-water evolution of the eastern East China Sea during the last 36,000 years

  1999cited by this paper
• Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation

  1998cited by this paper
• MODELTEST: testing the model of DNA substitution

  1998cited by this paper
• PHYLOGEOGRAPHY OF THE SARDINES (SARDINOPS SPP.): ASSESSING BIOGEOGRAPHIC MODELS AND POPULATION HISTORIES IN TEMPERATE UPWELLING ZONES

  1997cited by this paper
• Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection.

  1997cited by this paper
• Rapid Rate of Control-Region Evolution in Pacific Butterflyfishes (Chaetodontidae)

  1997cited by this paper
• A Pervasive Millennial-Scale Cycle in North Atlantic Holocene and Glacial Climates

  1997cited by this paper
• The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism.

  1996cited by this paper
• Mitochondrial DNA phylogeny and the reconstruction of the population history of a species: the case of the European anchovy (Engraulis encrasicolus).

  1996cited by this paper
• A 20,000-year record of ocean circulation and climate change from the Santa Barbara basin

  1995cited by this paper
• GENETIC EVIDENCE FOR A PLEISTOCENE POPULATION EXPLOSION

  1995cited by this paper
• Structure and evolution of teleost mitochondrial control regions

  1995cited by this paper
• Mitochondrial portraits of human populations using median networks.

  1995cited by this paper
• Rapid climate variability in the North Pacific Ocean during the past 95,000 years

  1995cited by this paper
• Sequence evolution and phylogenetic signal in control-region and cytochrome b sequences of rainbow fishes (Melanotaeniidae).

  1994cited by this paper
• A phylogenetic estimator of effective population size or mutation rate.

  1994cited by this paper
• Genetic Divergence, Reproductive Isolation, and Marine Speciation

  1994cited by this paper
• Body size, metabolic rate, generation time, and the molecular clock.

  1993cited by this paper
• Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.

  1993cited by this paper
• Statistical tests of neutrality of mutations.

  1993cited by this paper
• On the Structure and Origin of Major Glaciation Cycles 1. Linear Responses to Milankovitch Forcing

  1992cited by this paper
• Population growth makes waves in the distribution of pairwise genetic differences.

  1992cited by this paper
• Evolution of the salmonid mitochondrial control region.

  1992cited by this paper
• Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.

  1992cited by this paper
• Oxford Surveys in Evolutionary Biology

  1991cited by this paper
• Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations.

  1991cited by this paper
• Marine biotic interchange between the northern and southern hemispheres

  1991cited by this paper
• Global tectionics and formation of marginal basins: Role of the western Pacific

  1991cited by this paper
• Gene genealogies and the coalescent process.

  1990cited by this paper
• Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

  1989cited by this paper
• The effect of change in population size on DNA polymorphism.

  1989cited by this paper
• Intraspecific Phylogeography: The Mitochondrial DNA Bridge Between Population Genetics and Systematics

  1987cited by this paper
• Molecular Evolutionary Genetics

  1987cited by this paper
• The neighbor-joining method: a new method for reconstructing phylogenetic trees.

  1987cited by this paper
• Clupeoid fishes of the world (suborder Clupeoidei) : an annotated and illustrated catalogue of the herrings, sardines, pilchards, sprats, shads, anchovies, and wolfherrings

  1985cited by this paper
• Evolutionary relationship of DNA sequences in finite populations.

  1983cited by this paper
• On the number of segregating sites in genetical models without recombination.

  1975cited by this paper
• Fao Species Catalogue

  1972cited by this paper
• Zoogeography of the sea

  1953cited by this paper
• A Biological Study of the Anchovy, Engraulis australis in Australian Waters

  1950cited by this paper

• Chromosome-level genome assembly and annotation of Japanese anchovy (Engraulis japonicus)

  2025cites this paper
• Divergence of Palearctic and Nearctic Charrs (Salvelinus, Salmonidae) within the Arctic phylogenetic lineage: inferences based on mitochondrial and nuclear markers

  2025cites this paper
• Dynamics of genetic diversity and population structure of Eucalyptus urophylla from Indonesian Islands using SNP data

  2025cites this paper
• Genetic Variability and Population Genetic Structure of Marbled Flounder Pseudopleuronectes yokohamae in Korea and Japan Inferred from mtDNA Control Region Sequences

  2024cites this paper
• Population genetics and evolutionary history of the intertidal brittle star Ophiothrix (Ophiothrix) exigua in the northern China Sea

  2024cites this paper
• Morphological differences yet genetic similarity among seasonal cohorts of Japanese anchovy during the early life stages in the Kii Channel

  2024cites this paper
• New perspectives on the genetic structure of dotted gizzard shad (Konosirus punctatus) based on RAD-seq

  2024influential citation
• Ontogenetic Variation in the Trophic and Mercury Levels of Japanese Anchovy in the High Seas of the Northwestern Pacific Ocean

  2024cites this paper
• Intraspecific Structure of Liza affinis Inferred from Mitochondrial Cytochrome b Variations

  2023cites this paper
• A genetic assessment of the population structure and demographic history of Odontamblyopuslacepedii (Perciformes, Amblyopinae) from the northwestern Pacific

  2022cites this paper
• The evolutionary history of Priolepis (Gobiidae) in the Atlantic ocean

  2022cites this paper
• Range-wide population genetics of the tapertail anchovy Coilia nasus based on exon-capture data

  2022cites this paper
• The role of ancestral seascape discontinuity and geographical distance in structuring rockfish populations in the Pacific Northwest

  2022influential citation
• Genetic and morphological differentiation in the green swordtail fish, Xiphophorus hellerii: the influence of geographic and environmental factors

  2021cites this paper
• Experimental evidence for population variability of reproductive traits in Japanese anchovy Engraulis japonicus

  2021cites this paper
• Structure Analysis of Mitochondrial DNA Control Region Sequences and its Applications for the Study of Population Genetic Diversity of Acanthogobius ommaturus

  2020cites this paper
• Comparative population genetics of the federally endangered Relict Darter, and its sister taxon the Clarks Darter (Teleostei: Percidae)

  2020cites this paper
• Population Genomics Reveals Shallow Genetic Structure in a Connected and Ecologically Important Fish From the Northwestern Pacific Ocean

  2020cites this paper
• Population Genetic Analysis of Sillago nigrofasciata (Perciformes: Sillaginidae) Along the Coast of China by Sequencing Mitochondrial DNA Control Region

  2020cites this paper
• Genetic analysis provides insights into species distribution and population structure in East Atlantic horse mackerel (Trachurus trachurus and T. capensis)

  2020cites this paper
• Population Genetics of New Zealand Nemadactylus macropterus (tarakihi) and Characterisation of their Mitochondrial Genome

  2020cites this paper
• Genetic diversity and population structure of Acanthopagrus schlegelii inferred from mtDNA sequences

  2020cites this paper
• The Mitochondrial Markers Provide New Insights Into the Population Demographic History of Coilia nasus With Two Ecotypes (Anadromous and Freshwater)

  2020cites this paper
• Phylogenetic relationships of five Oriental Apanteles species-groups (Hymenoptera: Braconidae: Microgastrinae) by concatenating four molecular markers

  2019cites this paper
• Demographic history and population genetic analysis of Decapterus maruadsi from the northern South China Sea based on mitochondrial control region sequence

  2019influential citation
• Genetic structure in the marbled rockfish(Sebastiscus marmoratus)across most of the distribution in the northwestern Pacific

  2019cites this paper
• Study on population genetics of Sillago aeolus (Perciformes: Sillaginidae) in the Coast of China

  2019cites this paper
• Genetic diversity and metapopulation structures of two intertidal species along the coast of Zhejiang, China: implications for conservation

  2019cites this paper
• Effects of Pleistocene glaciation on the phylogeographic and demographic histories of chub mackerel Scomber japonicus in the north-western Pacific

  2018cites this paper
• Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region

  2018cites this paper
• Assessing the Speciation of a Cold Water Species, Japanese Sand Lance Ammodytes personatus, in the Northwestern Pacific by AFLP Markers

  2018cites this paper
• Historical Refugia and Isolation by Distance of the Mud Snail, Bullacta exarata (Philippi, 1849) in the Northwestern Pacific Ocean

  2018cites this paper
• Demographic histories and genetic diversity across pinnipeds are shaped by human exploitation, ecology and life-history

  2018cites this paper
• High genetic diversity and low-population differentiation in the Patagonian sprat (Sprattus fuegensis) based on mitochondrial DNA

  2018cites this paper
• Population Genetic Structure of Rock Bream (Oplegnathus fasciatus Temminck & Schlegel, 1884) Revealed by mtDNA COI Sequence in Korea and China

  2018cites this paper
• Molecular phylogeography and population history of Crassostrea sikamea (Amemiya, 1928) based on mitochondrial DNA

  2018cites this paper
• The genetic connectivity of Diplodus capensis ( blacktail ) and Neoscorpis lithophilus ( stonebream ) fish populations in the Southwest Indian Ocean

  2017cites this paper
• High intra-ocean, but limited inter-ocean genetic connectivity in populations of the deep-water oblique-banded snapper Pristipomoides zonatus (Pisces: Lutjanidae)

  2017cites this paper
• Is the Kuroshio Current a strong barrier for the dispersal of the gizzard shad (Konosirus punctatus) in the East China Sea

  2017cites this paper
• Wandering behaviour prevents inter and intra oceanic speciation in a coastal pelagic fish

  2017cites this paper
• Panmixia in a Critically Endangered Fish: The Totoaba (Totoaba macdonaldi) in the Gulf of California.

  2016cites this paper
• Genetic diversity and population structure of Hyporhamphus sajori (Beloniformes: Hemiramphidae) inferred from mtDNA control region and msDNA markers.

  2016cites this paper
• Population Structure of Blue Marlin, Makaira nigricans, in the Pacific and Eastern Indian Oceans.

  2016cites this paper
• Population Structure of Liparis tanakae (PISCES, Liparidae) from Korea based on Morphological and Molecular Traits

  2016cites this paper
• The low mitochondrial diversities in lizardfish Saurida elongate: Recent population expansion and selection

  2016cites this paper
• Population panmixia and the Pleistocene demographic expansion of spotty belly greenling Hexagrammos agrammus in the East Sea and Northwest Pacific

  2015influential citation
• The Possible Physical Barrier and Coastal Dispersal Strategy for Japanese Grenadier Anchovy, Coilia nasus in the East China Sea and Yellow Sea: Evidence from AFLP Markers

  2015cites this paper
• Mitochondrial DNA variation in the East China Sea and Yellow Sea populations of swimming crab Ovalipes punctatus

  2015cites this paper
• Significant population genetic structure detected in the small yellow croaker Larimichthys polyactis inferred from mitochondrial control region

  2015cites this paper
• Population structure of Hirundichthys oxycephalus in the northwestern Pacific inferred from mitochondrial cytochrome oxidase I gene

  2015cites this paper
• Biogeographical role of the Kuroshio Current in the amphibious mudskipper Periophthalmus modestus indicated by mitochondrial DNA data

  2015cites this paper
• Population genetic structure and larval dispersal strategy of portunid crab Charybdis bimaculata in Yellow sea and East China sea

  2015influential citation
• Genetic analysis of the populations of Japanese anchovy Engraulis japonicus from the Yellow Sea and East China Sea based on mitochondrial cytochrome b sequence

  2015cites this paper
• A barrier to gene flow in the Asian paddle crab, Charybdis japonica, in the Yellow Sea

  2015cites this paper
• An investigation of the population connectivity of sardines (Sardinops sagax) of the KZN sardine run using meristic, morphological and genetic data.

  2014cites this paper
• Contamination Delays the Release of Laricobius osakensis for Biological Control of Hemlock Woolly Adelgid: Cryptic Diversity in Japanese Laricobius spp. and Colony-Purification Techniques

  2014cites this paper
• Population Genetic Structure and Demographic History of Atrina pectinata Based on Mitochondrial DNA and Microsatellite Markers

  2014cites this paper
• Phylogeography and Population Genetics

  2014cites this paper
• Genetic diversity and population structure of largehead hairtail, Trichiurus japonicus, based on mtDNA control region

  2014cites this paper
• Genetic variation in scaly hair-fin anchovy Setipinna tenuifilis (Engraulididae) based on the mitochondrial DNA control region

  2014cites this paper
• Genetic population structure of Strongylocentrotus nudus inferred from microsatellite DNA and mtDNA analyses

  2014cites this paper
• Lack of population genetic differentiation of a marine ovoviviparous fish Sebastes schlegelii in Northwestern Pacific

  2014cites this paper
• Evolutionary mechanisms shaping the genetic population structure of coastal fish: insight from populations of Coilia nasus in Northwestern Pacific

  2014cites this paper
• Demographic response of cutlassfish (Trichiurus japonicus and T. nanhaiensis) to fluctuating palaeo-climate and regional oceanographic conditions in the China seas

  2014cites this paper
• Postglacial range shift and demographic expansion of the marine intertidal snail Batillaria attramentaria

  2014influential citation
• Local genetic patchiness but no regional differences between Indo-West Pacific populations of the dogtooth tuna Gymnosarda unicolor

  2014cites this paper
• Comparative phylogeography in marginal seas of the northwestern Pacific

  2014cites this paper
• Phylogeography of the Chinese Beard Eel, Cirrhimuraena chinensis Kaup, Inferred from Mitochondrial DNA: A Range Expansion after the Last Glacial Maximum

  2014cites this paper
• Mitochondrial ATPase 6/8 genes reveal genetic divergence in the Coilia dussumieri (Valenciennes, 1848) populations of north east and northwest coasts of India

  2014cites this paper
• Phylogeography of the finless porpoise (genus Neophocaena): testing the stepwise divergence hypothesis in the northwestern Pacific

  2014cites this paper
• Genetic diversity and population structure of the gizzard shad, Konosirus punctatus (Clupeidae, Pisces), in Korean waters based on mitochondrial DNA control region sequences

  2014influential citation
• Genetic Diversity and Population Structure of Two Lancelets Along the Coast of China

  2013influential citation
• Speciation of two stingrays with antitropical distributions: low levels of divergence in mitochondrial DNA and morphological characters suggest recent evolution

  2013cites this paper
• Genetic differentiation of Trachurus japonicus from the Northwestern Pacific based on the mitochondrial DNA control region

  2013cites this paper
• Assessment of the population genetic structure of Sphyrna lewini to identify conservation units in the Mexican Pacific

  2012cites this paper
• Population genetic structure and demographic history of small yellow croaker, Larimichthys polyactis (Bleeker, 1877), from coastal waters of China

  2012influential citation
• Analysis of genetic diversity and population structure of Pleuronectes yokohamae indicated by AFLP markers

  2012cites this paper
• Phylogeography Study of Ammodytes personatus in Northwestern Pacific: Pleistocene Isolation, Temperature and Current Conducted Secondary Contact

  2012cites this paper
• [Genetic diversity of Pseudosciaena polyactis in Zhoushan based on mitochondrial DNA D-loop region sequences].

  2012influential citation
• Contrasting pattern of mitochondrial population diversity between an estuarine bivalve, the Kumamoto oyster Crassostrea sikamea, and the closely related Pacific oyster C. gigas

  2012cites this paper
• Phylogeny and evolution of Cervidae based on complete mitochondrial genomes.

  2012cites this paper
• Phylogeography from South-Western Atlantic Ocean: Challenges for the Southern Hemisphere

  2012cites this paper
• Effects of sowing date on the growth and yield of maize cultivars ( Zea mays L.) and the growth temperature requirements

  2012cites this paper
• Divergence and gene flow between the East Sea and the Southeast Atlantic populations of North Pacific light fish Maurolicus japonicus Ishikawa

  2012cites this paper
• Contrasting pattern of mitochondrial population diversity between an estuarine bivalve, the Kumamoto oyster Crassostrea sikamea, and the closely related Pacific oyster C. gigas

  2012cites this paper
• Limits of Bayesian skyline plot analysis of mtDNA sequences to infer historical demographies in Pacific herring (and other species).

  2012cites this paper
• Size variability and natural mortality dynamics of anchovy Engraulis japonicus eggs under high fishing pressure

  2012cites this paper
• Population Genetic Structure and Evidence of Demographic Expansion of the Ayu (Plecoglossus altivelis) in East Asia

  2012influential citation
• Isolation and Characterization of Polymorphic Microsatellites from the Oriental River Prawn Macrobrachium nipponense (Caridea: Palaemonidae)

  2011cites this paper
• A study of genetic variations, population size, and population dynamics of the catadromous Japanese eel Anguilla japonica (Pisces) in northern Taiwan

  2011cites this paper
• Demographic Processes Underlying Subtle Patterns of Population Structure in the Scalloped Hammerhead Shark, Sphyrna lewini

  2011cites this paper
• Genetic differentiation of Japanese sardinella (Sardinella zunasi) populations in the Northwest Pacific revealed by ISSR analysis

  2011cites this paper
• Population genetic structure and demographic history of the fat greenling Hexagrammos otakii

  2011influential citation
• Phylogeographical pattern of Mazocraeoides gonialosae (Monogenea, Mazocraeidae) on the dotted gizzard shad, Konosirus punctatus, along the coast of China.

  2011cites this paper
• Genetic structure in species with shallow evolutionary lineages: a case study of the rare flatfish Verasper variegatus

  2011cites this paper
• Population genetic structure of the striped silverside, Atherinomorus endrachtensis (Atherinidae, Atheriniformes, Teleostei), inhabiting marine lakes and adjacent lagoons in Palau: marine lakes are "Islands" for marine species.

  2011cites this paper
• Population genetic structure of the point-head flounder, Cleisthenes herzensteini, in the Northwestern Pacific

  2011cites this paper
• Polymorphic microsatellite loci for the Japanese anchovy Engraulis japonicus (Engraulidae).

  2011influential citation
• [Analysis of amphioxus geographic populations in the West Pacific Ocean based on COX I gene].

  2010cites this paper
• Population genetic structure and larval dispersal potential of spottedtail goby Synechogobius ommaturus in the north-west Pacific.

  2010cites this paper