Monitoring protein folding through high pressure NMR spectroscopy.

No abstract is available for this paper.

• Publication year

  2017

• Venue

  Progress in nuclear magnetic resonance spectroscopy

• Publication date

  2017-11-01

• Fields of study

  Medicine, Chemistry

• Identifiers
  DOI 10.1016/j.pnmrs.2017.05.003PMID 29157491
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  2016influential reference
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