Automated 2D IR spectroscopy using a mid-IR pulse shaper and application of this technology to the human islet amyloid polypeptide

No abstract is available for this paper.

• Publication year

  2007

• Venue

  Proceedings of the National Academy of Sciences of the United States of America

• Publication date

  2007-09-04

• Fields of study

  Medicine, Chemistry

• Identifiers
  DOI 10.1073/pnas.0700804104PMID 17502604PMCID PMC1964818
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Coherently controlled ultrafast four-wave mixing spectroscopy.

  2007cited by this paper
• Femtosecond pulse shaping directly in the mid-IR using acousto-optic modulation.

  2006cited by this paper
• Multidimensional infrared spectroscopy of water. I. Vibrational dynamics in two-dimensional IR line shapes.

  2006cited by this paper
• Generation and characterization of phase and amplitude shaped femtosecond mid-IR pulses.

  2006cited by this paper
• Watching hydrogen-bond dynamics in a β-turn by transient two-dimensional infrared spectroscopy

  2006cited by this paper
• DNA vibrational coupling revealed with two-dimensional infrared spectroscopy: insight into why vibrational spectroscopy is sensitive to DNA structure.

  2006cited by this paper
• Picosecond dynamics of a membrane protein revealed by 2D IR.

  2006cited by this paper
• Passively correcting phase drift in two-dimensional infrared spectroscopy.

  2006cited by this paper
• Intersheet rearrangement of polypeptides during nucleation of {beta}-sheet aggregates.

  2005cited by this paper
• Vibrational dynamics of ions in glass from fifth-order two-dimensional infrared spectroscopy.

  2005cited by this paper
• Active phase stabilization in Fourier-transform two-dimensional infrared spectroscopy.

  2005cited by this paper
• Intersheet rearrangement of polypeptides during nucleation of β-sheet aggregates

  2005cited by this paper
• Ultrafast Dynamics of Solute-Solvent Complexation Observed at Thermal Equilibrium in Real Time

  2005cited by this paper
• Chemical exchange 2D IR of hydrogen-bond making and breaking.

  2005cited by this paper
• Dissecting coherent vibrational spectra of small proteins into secondary structural elements by sensitivity analysis.

  2005cited by this paper
• Conformational changes during the nanosecond-to-millisecond unfolding of ubiquitin.

  2005cited by this paper
• Characteristic two-dimensional IR spectroscopic features of antiparallel and parallel beta-sheet polypeptides: simulation studies.

  2005cited by this paper
• Disentangling multidimensional femtosecond spectra of excitons by pulse shaping with coherent control.

  2004cited by this paper
• Phase-stabilized two-dimensional electronic spectroscopy.

  2004cited by this paper
• Double-resonance versus pulsed Fourier transform two-dimensional infrared spectroscopy: an experimental and theoretical comparison.

  2004cited by this paper
• Vibrational echo correlation spectroscopy probes of hydrogen bond dynamics in water and methanol.

  2004cited by this paper
• Progress towards a molecular-level structural understanding of amyloid fibrils.

  2004cited by this paper
• Two-dimensional infrared spectroscopy of antiparallel beta-sheet secondary structure.

  2004cited by this paper
• A pulse sequence for directly measuring the anharmonicities of coupled vibrations: Two-quantum two-dimensional infrared spectroscopy.

  2004cited by this paper
• Femtosecond infrared coherent excitation of liquid phase vibrational population distributions (v > 5)

  2004cited by this paper
• Obtaining absorptive line shapes in two-dimensional infrared vibrational correlation spectra.

  2003cited by this paper
• Vibrational Coupling between Amide-I and Amide-A Modes Revealed by Femtosecond Two Color Infrared Spectroscopy†

  2003cited by this paper
• Ultrafast coherent nuclear motions of hydrogen bonded carboxylic acid dimers

  2003cited by this paper
• Femtosecond Phase-Coherent Two-Dimensional Spectroscopy

  2003cited by this paper
• Femtosecond two-dimensional infrared spectroscopy: IR-COSY and THIRSTY

  2002cited by this paper
• Ultrafast vibrational spectroscopy in condensed phases

  2002cited by this paper
• Heterodyned Two-Dimensional Infrared Spectroscopy of Solvent-Dependent Conformations of Acetylproline-NH2†

  2001cited by this paper
• Two-dimensional IR spectroscopy can be designed to eliminate the diagonal peaks and expose only the crosspeaks needed for structure determination

  2001cited by this paper
• Identification of a novel human islet amyloid polypeptide beta-sheet domain and factors influencing fibrillogenesis.

  2001cited by this paper
• Vibrational anharmonicities revealed by coherent two-dimensional infrared spectroscopy.

  2001cited by this paper
• Two-dimensional infrared spectroscopy of peptides by phase-controlled femtosecond vibrational photon echoes.

  2000cited by this paper
• Structure Determination of Trialanine in Water Using Polarization Sensitive Two-Dimensional Vibrational Spectroscopy

  2000cited by this paper
• Multidimensional femtosecond correlation spectroscopies of electronic and vibrational excitations.

  2000cited by this paper
• Two-Dimensional Electronic Correlation and Relaxation Spectra: Theory and Model Calculations

  1999cited by this paper
• Multidimensional femtosecond correlation spectroscopies of electronic and vibrational excitons

  1999cited by this paper
• The mechanism of islet amyloid polypeptide toxicity is membrane disruption by intermediate-sized toxic amyloid particles.

  1999cited by this paper
• Heterodyne-detected stimulated photon echo : applications to optical dynamics in solution

  1998cited by this paper
• STRUCTURE OF THE AMIDE I BAND OF PEPTIDES MEASURED BY FEMTOSECOND NONLINEAR-INFRARED SPECTROSCOPY

  1998cited by this paper
• High-resolution acousto-optic shaping of unamplified and amplified femtosecond laser pulses

  1997cited by this paper
• The structure of amyloid fibrils by electron microscopy and X-ray diffraction.

  1997cited by this paper
• Fabry-Perot Interferometers

  1986cited by this paper

• Ultrabroadband Excitation of Hot Carriers in Plasmonic Nanorods Revealed by Two‐Dimensional Electronic Spectroscopy

  2026cites this paper
• Ultrafast polariton dynamics in strong coupling systems studied by two-dimensional spectroscopy

  2026cites this paper
• From two to one: resolving CO binding in acetyl-CoA synthase.

  2026cites this paper
• Mammals that can develop type 2 diabetes have a similarly structured β-sheet amyloid oligomer.

  2026cites this paper
• Pathway-specific nonlinear vibrational action spectroscopy with mixed frequency-time domain pulse shaping.

  2025cites this paper
• Two-dimensional infrared spectroscopy as a tool to reveal the vibrational and molecular structure of [FeFe] hydrogenases

  2025cites this paper
• Controlling Intramolecular Vibrational Redistribution with an Infrared Photonic Cavity.

  2025cites this paper
• Exciton Coupling and Charge Transfer Dynamics in Zn(II) Complexes of π‑Extended Dipyrrins

  2025cites this paper
• Vibrational dynamics of iron pentacarbonyl [Fe(CO)5] in liquid alkanes revisited.

  2025cites this paper
• Frontier femtosecond mid‐infrared pump‐probe and 2DIR techniques: Advances in experimental methodologies

  2025cites this paper
• Two-dimensional infrared spectroscopy using a fast-scanning interferometer and chirped pulse upconversion at 100 kHz.

  2025cites this paper
• Transition Dipole Strength as a Quantitative Tool for Protein Secondary Structure Analysis

  2025cites this paper
• Time‐Domain Visualization of Electron‐Phonon Coupling in Nanographenes

  2025cites this paper
• Understanding the [NiFe] Hydrogenase Active Site Environment through Ultrafast Infrared and 2D-IR Spectroscopy of the Subsite Analogue K[CpFe(CO)(CN)2] in Polar and Protic Solvents

  2024cites this paper
• Sum frequency generation (SFG) spectroscopy at surfaces and interfaces: Adsorbate structure and molecular bond orientation

  2024cites this paper
• Chirped pulse upconversion for femtosecond mid-infrared spectroscopy at 100 kHz.

  2024cites this paper
• Unnatural Amino Acids for Biological Spectroscopy and Microscopy.

  2024cites this paper
• Atomic-force-microscopy-based time-domain two-dimensional infrared nanospectroscopy

  2024cites this paper
• Scattering Elimination in 2D IR Immune from Detector Artifacts

  2024cites this paper
• Probing Backbone Coupling within Hydrated Proteins with Two-Color 2D Infrared Spectroscopy.

  2024cites this paper
• EMBER multi-dimensional spectral microscopy enables quantitative determination of disease- and cell-specific amyloid strains

  2023cites this paper
• Development of Two-Dimensional Electronic-Vibrational Sum Frequency Generation (2D-EVSFG) for Vibronic and Solvent Couplings of Molecules at Interfaces and Surfaces

  2023cites this paper
• EMBER multidimensional spectral microscopy enables quantitative determination of disease- and cell-specific amyloid strains

  2023cites this paper
• Structural Insights into the Amyloid Fibril Polymorphism Using an Isotope-Edited Vibrational Circular Dichroism Study at the Amino Acid Residue Level.

  2023cites this paper
• Modulated super-Gaussian laser pulse to populate a dark rovibrational state of acetylene.

  2023cites this paper
• Optical Screening and Classification of Drug Binding to Proteins in Human Blood Serum

  2023cites this paper
• Ground-state heterogeneity and vibrational energy redistribution in bacterial phytochrome observed with femtosecond 2D IR spectroscopy.

  2023cites this paper
• Unpolarized laser method for infrared spectrum calculation of amide I C=O bonds in proteins using molecular dynamics simulation

  2023cites this paper
• Two-Dimensional Infrared Spectroscopy of Isolated Molecular Ions.

  2023cites this paper
• A Robust, Modern Strategy for Treating Coherence Pathways in Unstable and Inhomogeneous Magnetic Resonance Experiments

  2022cites this paper
• A polarization scheme that resolves cross-peaks with transient absorption and eliminates diagonal peaks in 2D spectroscopy

  2022cites this paper
• Time-resolved infrared absorption spectroscopy applied to photoinduced reactions: how and why

  2022cites this paper
• BoxCARS 2D IR spectroscopy with pulse shaping.

  2022cites this paper
• Laser control of a dark vibrational state of acetylene in the gas phase-Fourier transform pulse shaping constraints and effects of decoherence.

  2022cites this paper
• Cross-α/β polymorphism of PSMα3 fibrils

  2022cites this paper
• Dephasing Processes in the Molecular Dye Lumogen-F Orange Characterized by Two-Dimensional Electronic Spectroscopy

  2022cites this paper
• Monitoring early-stage β-amyloid dimer aggregation by histidine site-specific two-dimensional infrared spectroscopy in a simulation study.

  2022cites this paper
• Measuring proteins in H2O using 2D-IR spectroscopy: pre-processing steps and applications toward a protein library.

  2022cites this paper
• 2D-IR spectroscopy of proteins in H2O-A Perspective.

  2022cites this paper
• Biofluid Analysis and Classification using IR and 2D-IR Spectroscopy

  2021cites this paper
• Probing Ligand Effects on the Ultrafast Dynamics of Copper Complexes via Midinfrared Pump-Probe and 2DIR Spectroscopies.

  2021cites this paper
• Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics

  2021cites this paper
• Giving voice to the weak: Application of active noise reduction in transient infrared spectroscopy

  2021cites this paper
• Allosteric Switching of Calmodulin in a Mycobacterium smegmatis porin A (MspA) Nanopore-Trap.

  2021cites this paper
• Isolating Polaritonic 2D-IR Transmission Spectra.

  2021cites this paper
• Phase-modulated rapid-scanning fluorescence-detected two-dimensional electronic spectroscopy

  2021cites this paper
• Direct comparison of amplitude and geometric measures of spectral inhomogeneity using phase-cycled 2D-IR spectroscopy.

  2021cites this paper
• Multidimensional electronic spectroscopy in high-definition-Combining spectral, temporal, and spatial resolutions.

  2021cites this paper
• Roadmap on multimode light shaping

  2021cites this paper
• Intramolecular O-H⋯S hydrogen bonding in threefold symmetry: Line broadening dynamics from ultrafast 2DIR-spectroscopy and ab initio calculations.

  2021cites this paper
• Transient 2D IR spectroscopy from micro- to milliseconds.

  2021cites this paper
• Protein Dynamics by Two-Dimensional Infrared Spectroscopy.

  2021cites this paper
• Precise Identification of the Dimethyl Sulfoxide Triggered Tricarbonyldichlororuthenium(II) Dimer for Releasing CO.

  2021cites this paper
• Excited-state vibration-polariton transitions and dynamics in nitroprusside

  2021cites this paper
• Time-Resolved Temperature-Jump Infrared Spectroscopy at a High Repetition Rate

  2020cites this paper
• Analysis of Membrane Lipids

  2020cites this paper
• Excited-state vibration-polariton transitions and dynamics in nitroprusside

  2020cites this paper
• Ultrafast Excited State Dynamics of Tricarbocyanine Dyes Probed by Two-Dimensional Electronic Spectroscopy: Polar Solvation vs Photoisomerization.

  2020cites this paper
• Detection of Glycine as a Model Protein in Blood Serum Using 2D-IR Spectroscopy.

  2020cites this paper
• Two-Dimensional Infrared Spectroscopy of Nitrile Labels as a Tool to Probe Dynamics and Interactions in Lipid Membranes

  2020cites this paper
• 2D-Infrared Spectroscopy of Proteins in Water: Using the Solvent Thermal Response as an Internal Standard

  2020cites this paper
• Vibrational relaxation dynamics of a potential local infrared probe: Isocyanate

  2020cites this paper
• Composition-Dependent Hydrogen-Bonding Motifs and Dynamics in Brønsted Acid–Base Mixtures

  2020cites this paper
• Two-dimensional infrared spectral explorations into bilayer and monolayer self-assemblies of amphiphilic polypeptides

  2020cites this paper
• Pulse-shaped chopping: Eliminating and characterizing heat effects in ultrafast infrared spectroscopy.

  2020cites this paper
• Two-dimensional infrared spectroscopy: an emerging analytical tool?

  2020cites this paper
• Shot-to-shot 2D IR spectroscopy at 100 kHz using a Yb laser and custom-designed electronics.

  2020cites this paper
• Leveraging scatter in two-dimensional spectroscopy: passive phase drift correction enables a global phasing protocol.

  2020cites this paper
• Probing the heterogeneous structure of eumelanin using ultrafast vibrational fingerprinting

  2020cites this paper
• Synergistic Approach of Ultrafast Spectroscopy and Molecular Simulations in the Characterization of Intramolecular Charge Transfer in Push-Pull Molecules

  2020cites this paper
• A Different hIAPP Polymorph Is Observed in Human Serum Than in Aqueous Buffer: Demonstration of a New Method for Studying Amyloid Fibril Structure Using Infrared Spectroscopy.

  2020cites this paper
• Membrane-Dependent Amyloid Aggregation of Human BAX α9 (173-192)

  2020cites this paper
• Fast phase cycling in non-collinear optical two-dimensional coherent spectroscopy.

  2020cites this paper
• Shining a light on clinical spectroscopy: Translation of diagnostic IR, 2D-IR and Raman spectroscopy towards the clinic

  2019cites this paper
• The Development and Applications of Phase Cycling in Multidimensional Optical Spectroscopy

  2019cites this paper
• Ultrafast Spectroscopic Techniques—Multidimensional Infrared Spectroscopy

  2019cites this paper
• Measuring proteins in H2O with 2D-IR spectroscopy

  2019cites this paper
• Understanding the structure and dynamics of hydrogenases by ultrafast and two-dimensional infrared spectroscopy† †Electronic supplementary information (ESI) available: Supplementary figures. Description of the Morse fit. Analysis of CN stretch vibrational relaxation. References. See DOI: 10.1039/c9s

  2019cites this paper
• Theory of three-pulse photon echo spectroscopy with dual frequency combs

  2019cites this paper
• Multidimensional Time-Resolved Spectroscopy

  2019cites this paper
• Multispectral multidimensional spectrometer spanning the ultraviolet to the mid-infrared.

  2019cites this paper
• Frequency-domain two-dimensional infrared spectroscopy using an acousto-optic programmable dispersive filter.

  2019cites this paper
• A 100 kHz Pulse Shaping 2 DIR Spectrometer Based On Dual Yb : KGW Amplifiers

  2019cites this paper
• Vibrational Approach to the Dynamics and Structure of Protein Amyloids

  2019cites this paper
• Two-dimensional UV spectroscopy: a new insight into the structure and dynamics of biomolecules

  2019cites this paper
• Multidimensional Spectroscopy on the Microscale: Development of a Multimodal Imaging System Incorporating 2D White-Light Spectroscopy, Broadband Transient Absorption, and Atomic Force Microscopy.

  2019cites this paper
• Scattering Elimination of Heterodyne-Detected 2D IR Spectra Using Choppers and Shutters.

  2019cites this paper
• Enhancing the signal strength of surface sensitive 2D IR spectroscopy.

  2019cites this paper
• Ultrafast spectroscopy: state of the art and open challenges.

  2019cites this paper
• Recent advances in multidimensional ultrafast spectroscopy

  2018cites this paper
• Distinct Binding of Rhenium Catalysts on Nanostructured and Single-Crystalline TiO2 Surfaces Revealed by Two-Dimensional Sum Frequency Generation Spectroscopy

  2018cites this paper
• Two-dimensional infrared (2D IR) spectroscopy for elucidating ion occupancies in the selectivity filter of ion channels

  2018cites this paper
• A 100 kHz Pulse Shaping 2D-IR Spectrometer Based on Dual Yb:KGW Amplifiers.

  2018cites this paper
• The molecular pH-response mechanism of the plant light-stress sensor PsbS

  2018cites this paper
• Applications of ultrafast multidimensional electronic spectroscopy to the study of plant light harvesting systems and colloidal quantum dots

  2018cites this paper
• The two active glutamates of the plant stress sensor PsbS contribute non-equivalently to its pH-activated molecular response mechanism

  2018cites this paper
• MEMS-based Fourier transform spectrometer using pulsed infrared light source

  2018cites this paper
• Developing Novel Non-Natural Amino Acids as Spectroscopic Reporters of Structure for Peptide Systems

  2018cites this paper
• Rapid Screening of DNA-Ligand Complexes via 2D-IR Spectroscopy and ANOVA-PCA.

  2018cites this paper
• Spectroscopic Signature for Stable β-Amyloid Fibrils versus β-Sheet-Rich Oligomers.

  2018cites this paper