DNA methylation in thermophilic bacteria: N4-methylcytosine, 5-methylcytosine, and N6-methyladenine.

No abstract is available for this paper.

• Publication year

  1985

• Venue

  Nucleic Acids Research

• Publication date

  1985-02-25

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1093/NAR/13.4.1399PMID 4000939PMCID PMC341080
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Quantitative reversed-phase high-performance liquid chromatography of major and modified nucleosides in DNA.

  1984cited by this paper
• Compilation of tRNA sequences.

  1984cited by this paper
• Restriction and modification enzymes and their recognition sequences.

  1984cited by this paper
• The genomes of Desulfovibrio gigas and D. vulgaris.

  1984cited by this paper
• Methyl-directed repair of DNA base-pair mismatches in vitro.

  1983cited by this paper
• Cytosine modification in DNA by BcnI methylase yields N 4‐methylcytosine

  1983cited by this paper
• Genomic environment of variant surface antigen genes of Trypanosoma equiperdum.

  1983cited by this paper
• Pyrodictium gen. nov., a New Genus of Submarine Disc-Shaped Sulphur Reducing Archaebacteria Growing Optimally at 105°C.

  1983cited by this paper
• Effects of high levels of DNA adenine methylation on methyl-directed mismatch repair in Escherichia coli.

  1983cited by this paper
• The effect of site specific methylation on restriction endonuclease cleavage (update)

  1983cited by this paper
• Base excision repair in the thermophile Thermus sp. strain X-1

  1983cited by this paper
• The 5-methylcytosine content of DNA from human tumors.

  1983cited by this paper
• Sequence-specific DNA modification in Neisseria gonorrhoeae

  1983cited by this paper
• Tissue-specific differences in DNA methylation in various mammals.

  1983cited by this paper
• The isolation and characterization of the Escherichia coli DNA adenine methylase (dam) gene.

  1983cited by this paper
• Methylated nucleic acid bases in Mycobacterium and mycobacteriophage DNA.

  1982cited by this paper
• Nutrition and carbon metabolism of Methanococcus voltae

  1982cited by this paper
• Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells.

  1982cited by this paper
• Heat- and alkali-induced deamination of 5-methylcytosine and cytosine residues in DNA.

  1982cited by this paper
• Modification profiles of bacterial genomes.

  1982cited by this paper
• Cytosine methylation of the sequence GATC in a mycoplasma

  1982cited by this paper
• 5-Methylcytosine in eukaryotic DNA.

  1981cited by this paper
• Methylated bases in mycoplasmal DNA.

  1980cited by this paper
• Quantitative reversed-phase high performance liquid chromatographic determination of major and modified deoxyribonucleosides in DNA.

  1980cited by this paper
• Escherichia coli mutator mutants deficient in methylation-instructed DNA mismatch correction.

  1980cited by this paper
• Isolation from soil and properties of the extreme thermophile Clostridium thermohydrosulfuricum

  1979cited by this paper
• Physiology of thermophilic bacteria.

  1979cited by this paper
• DNA glycosylases, endonucleases for apurinic/apyrimidinic sites, and base excision-repair.

  1979cited by this paper
• Characterization of DNA adenine methylation mutants of Escherichia coli K12.

  1979cited by this paper
• Molecular basis of base substitution hotspots in Escherichia coli

  1978cited by this paper
• Induced mutagenesis in dam− mutants of Escherichia coli: A role for 6-methyladenine residues in mutation avoidance

  1978cited by this paper
• Complementary action of restriction enzymes endo R-DpnI and Endo R-DpnII on bacteriophage f1 DNA.

  1977cited by this paper
• Repair tracts in mismatched DNA heteroduplexes.

  1976cited by this paper
• Deoxyribonucleic Acid Methylation and Development in Caulobacter bacteroides

  1973cited by this paper
• Methanobacterium thermoautotrophicus sp. n., an Anaerobic, Autotrophic, Extreme Thermophile

  1972cited by this paper
• Deficiency of the DNA of Micrococcus radiodurans in methyladenine and methylcytosine.

  1972cited by this paper
• Reexamination of the Association Between Melting Point, Buoyant Density, and Chemical Base Composition of Deoxyribonucleic Acid

  1970cited by this paper
• Purification and properties of deoxyribonucleic acid methylase from Bacillus subtilis.

  1966cited by this paper
• Determination of the base composition of deoxyribonucleic acid from its buoyant density in CsCl.

  1962cited by this paper
• Experiments on the methane bacteria in sludge.

  1954cited by this paper
• A New Type of Glucose Fermentation by Clostridium thermoaceticum

  1942cited by this paper

• Decoding the genome and epigenome of avian Escherichia coli strains by R10.4.1 nanopore sequencing

  2025cites this paper
• DNA methylation in legume crops: mechanisms, agronomic relevance, and perspectives

  2025cites this paper
• Detection, molecular function and mechanisms of m5C in cancer

  2025cites this paper
• Environmental Factor Index (EFI): A Novel Approach to Measure the Strength of Environmental Influence on DNA Methylation in Identical Twins

  2024cites this paper
• Whole Genome Sequencing and Comparative Analysis of the First Ehrlichia canis Isolate in China

  2024cites this paper
• Integrative DNA methylome and transcriptome analysis reveals DNA adenine methylation is involved in Salmonella enterica Typhimurium response to oxidative stress

  2023cites this paper
• Shaping eukaryotic epigenetic systems by horizontal gene transfer

  2023cites this paper
• Mechanisms of DNA methylation and histone modifications.

  2023cites this paper
• AutoParams: An Automated Web-Based Tool To Generate Force Field Parameters for Molecular Dynamics Simulations

  2023cites this paper
• The Progression of N6-methyladenosine Study and Its Role in Neuropsychiatric Disorders

  2022cites this paper
• Risks and rewards of big-data in epigenomics research: an interview with Melanie Ehrlich.

  2022cites this paper
• Means, mechanisms and consequences of adenine methylation in DNA

  2022cites this paper
• MaskDNA-PGD: An innovative deep learning model for detecting DNA methylation by integrating mask sequences and adversarial PGD training as a data augmentation method

  2022cites this paper
• N6-methyladenine: A Rare and Dynamic DNA Mark.

  2022cites this paper
• DNA Methylation in Prokaryotes.

  2022cites this paper
• Deep6mAPred: A CNN and Bi-LSTM-based Deep Learning Method for Predicting DNA N6-methyladenosine Sites Across Plant Species.

  2022cites this paper
• Genome-wide mapping of N4-methylcytosine at single-base resolution by APOBEC3A-mediated deamination sequencing

  2022cites this paper
• Evaluation of the Properties of the DNA Methyltransferase from Aeropyrum pernix K1

  2021cites this paper
• Determination of recognition sequence of DNA methyltransferase M. Ape from Hyperthermophilic archaea Aeropyrum pernix

  2021cites this paper
• Roles and Mechanisms of DNA Methylation in Vascular Aging and Related Diseases

  2021cites this paper
• Fine mapping and candidate gene analysis of leaf tip premature senescence and Dwarf Mutant dls-1 in Rice

  2021cites this paper
• Methylation of 45S Ribosomal DNA (rDNA) Is Associated with Cancer and Aging in Humans

  2021cites this paper
• Biochemical and structural basis for YTH domain of human YTHDC1 binding to methylated adenine in DNA

  2020cites this paper
• Assessment of DNA Epigenetic Modifications.

  2020cites this paper
• DNA N6-Methyladenine Modification in Plant Genomes—A Glimpse into Emerging Epigenetic Code

  2020cites this paper
• JMB Special Issue on "Reading DNA and RNA methylation" Detection of DNA modifications by sequence-specific transcription factors.

  2020cites this paper
• Synthetic Life with Alternative Nucleic Acids as Genetic Materials

  2020cites this paper
• Eliminating primer dimers and improving SNP detection using self-avoiding molecular recognition systems

  2020cites this paper
• The Phylogenetic Relationships of a 4mC/6mA DNA Methyltransferase in Prokaryotes.

  2020cites this paper
• Sources of artifact in measurements of 6mA and 4mC abundance in eukaryotic genomic DNA

  2019cites this paper
• N4-Cytosine DNA Methylation Is Involved in the Maintenance of Genomic Stability in Deinococcus radiodurans

  2019cites this paper
• Detection of N6-methyladenosine modification residues (Review)

  2019influential citation
• N4-cytosine DNA methylation regulates transcription and pathogenesis in Helicobacter pylori

  2018cites this paper
• The DNA Methylome of the Hyperthermoacidophilic Crenarchaeon Sulfolobus acidocaldarius

  2018cites this paper
• Isotope-dilution mass spectrometry for exact quantification of noncanonical DNA nucleosides

  2018cites this paper
• Etude de la méthylation de l'ADN chez la bactérie pathogène d'insectes Photorhabdus luminescens

  2018cites this paper
• Selective recognition of N4-methylcytosine in DNA by engineered transcription-activator-like effectors

  2018cites this paper
• Modificaomics: deciphering the functions of biomolecule modifications

  2018cites this paper
• N4-cytosine DNA methylation regulates transcription and pathogenesis in Helicobacter pylori

  2018cites this paper
• The complete methylome of an entomopathogenic bacterium reveals the existence of loci with unmethylated Adenines

  2018cites this paper
• Deciphering bacterial epigenomes using modern sequencing technologies

  2018cites this paper
• The chemistries and consequences of DNA and RNA methylation and demethylation

  2017cites this paper
• Quantitative LC-MS liefert keinen Hinweis auf m6dA oder m4dC im Genom von Mausstammzellen und -geweben

  2017cites this paper
• Characterization of Cytosine Methylation and the DNA Methyltransferases of Toxoplasma gondii

  2017cites this paper
• Complete genome sequence of Thermotoga sp. strain RQ7

  2017cites this paper
• Quantitative LC-MS Provides No Evidence for m6 dA or m4 dC in the Genome of Mouse Embryonic Stem Cells and Tissues.

  2017cites this paper
• Construction and functionalization of oligonucleotides

  2016cites this paper
• Adaptive engineering of a hyperthermophilic archaeon on CO and discovering the underlying mechanism by multi-omics analysis

  2016cites this paper
• PCR amplification of GC-rich DNA regions using the nucleotide analog N4-methyl-2'-deoxycytidine 5'-triphosphate.

  2016cites this paper
• N6-Methyladenine: A Conserved and Dynamic DNA Mark.

  2016cites this paper
• Biosynthesis and Function of Modified Bases in Bacteria and Their Viruses.

  2016cites this paper
• N 6-Methyladenine : A Conserved and Dynamic DNA

  2016cites this paper
• Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite- sequencing

  2015cites this paper
• Genetic Modification of Thermotoga to Degrade Cellulose

  2015cites this paper
• N4‐Methylation of Cytosine Drastically Favors the Formation of (6‐4) Photoproducts in a TCG Context

  2015cites this paper
• The AlkB Family of Fe(II)/α-Ketoglutarate-dependent Dioxygenases: Repairing Nucleic Acid Alkylation Damage and Beyond*

  2015cites this paper
• NanoCluster Beacons Enable Detection of a Single N⁶-Methyladenine.

  2015cites this paper
• Auswirkungen ausgewählter Einflussfaktoren auf die genomweite DNA-Methylierung beim Menschen

  2015cites this paper
• Getting rid of DNA methylation.

  2014cites this paper
• Removal of N-Alkyl Modifications from N2-Alkylguanine and N4-Alkylcytosine in DNA by the Adaptive Response Protein AlkB

  2013cites this paper
• Diverse Functions of Restriction-Modification Systems in Addition to Cellular Defense

  2013cites this paper
• A cyclobutane thymine–N4-methylcytosine dimer is resistant to hydrolysis but strongly blocks DNA synthesis

  2013cites this paper
• Capacity of N4-methyl-2'-deoxycytidine 5'-triphosphate to sustain the polymerase chain reaction using various thermostable DNA polymerases.

  2013cites this paper
• Characterization of Clostridium thermocellum Isolates Grown on Cellulose and Sugarcane Bagasse

  2013cites this paper
• Removal of N-Alkyl Modifications from N(superscript 2)- Alkylguanine and N(superscript 4)-Alkylcytosine in DNA by the Adaptive Response Protein AlkB

  2013cites this paper
• Beyond DNA origami: the unfolding prospects of nucleic acid nanotechnology.

  2012cites this paper
• Beyond DNA origami : A look on the bright future of nucleic acid nanotechnology

  2012cites this paper
• Methylation by a Unique α-class N4-Cytosine Methyltransferase Is Required for DNA Transformation of Caldicellulosiruptor bescii DSM6725

  2012cites this paper
• Host-Mimicking Strategies in DNA Methylation for Improved Bacterial Transformation

  2012influential citation
• Identification and characterisation of MORC6 as a component of the RNA-directed DNA methylation pathway in Arabidopsis thaliana

  2012cites this paper
• Cloning and characterization of the TneDI restriction–modification system of Thermotoga neapolitana

  2011cites this paper
• STRATEGIES OF HYPERTHERMOPHILES IN NUCLEIC ACIDS ADAPTATION TO HIGH TEMPERATURE

  2011cites this paper
• Determination of Base Composition

  2011cites this paper
• Genomic N6‐methyladenine determination by MEKC with LIF

  2010cites this paper
• Genome-wide high throughput analysis of DNA methylation in eukaryotes.

  2009cites this paper
• DNA base flipping by both members of the PspGI restriction–modification system

  2008cites this paper
• MicroRNA Regulation by Epigenetic Mechanisms

  2008cites this paper
• Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8

  2008cites this paper
• Growth of the protozoan parasite Entamoeba histolytica in 5-azacytidine has limited effects on parasite gene expression

  2007cites this paper
• How Nucleic Acids Cope with High Temperature

  2007cites this paper
• Application of CE for determination of DNA base composition

  2007cites this paper
• Functional analysis of the DNA repair protein MBD4

  2006cites this paper
• N6-methyladenine: the other methylated base of DNA.

  2006cites this paper
• Cancer-linked DNA hypomethylation and its relationship to hypermethylation.

  2006cites this paper
• GENETIC FIDELITY IN EXTREMOPHILES

  2006cites this paper
• Nucleic acid stability in thermophilic prokaryotes: a review

  2005cites this paper
• The Controversial Denouement of Vertebrate DNA Methylation Research

  2005cites this paper
• Extremophiles May Be Irrelevant to the Origin of Life

  2004influential citation
• Detection and cloning of the gene encoding a protein produced by nonpathogenic mutants of Fusarium oxysporum.

  2000cites this paper
• Identifying 5-methylcytosine and related modifications in DNA genomes.

  1998cites this paper
• DNA stability and DNA binding proteins.

  1996cites this paper
• Phylogeny of Methanopyrus kandleri based on methyl coenzyme M reductase operons.

  1996cites this paper
• Restriction analysis of actinomycetes chromosomal DNA.

  1996cites this paper
• Hypermodified bases in DNA

  1995cites this paper
• Isolation of an R- M+ mutant of Yersinia enterocolitica serotype O:8 and its application in construction of rough mutants utilizing mini-Tn5 derivatives and lipopolysaccharide-specific phage

  1994cites this paper
• Biology of DNA restriction

  1993cites this paper
• The crystal structure of N4-methylcytosine.guanosine base-pairs in the synthetic hexanucleotide d(CGCGm4CG).

  1993cites this paper
• Chapter 11 Chromosome structure, DNA topoisomerases, and DNA polymerases in archaebacteria (archaea)

  1993cites this paper
• Genetics of Paracoccus denitrificans.

  1993cites this paper
• Effect of DNA methylation on the binding of vertebrate and plant proteins to DNA.

  1993cites this paper