Comprehensive transcript profiling of two grapevine rootstock genotypes contrasting in drought susceptibility links the phenylpropanoid pathway to enhanced tolerance

Highlights Drought tolerance in the M4 grapevine rootstock genotype could be associated with a higher capability to counteract oxidative stresses by enhancing the accumulation of resveratrol in roots.

• Publication year

  2015

• Venue

  Journal of Experimental Botany

• Publication date

  2015-06-02

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1093/jxb/erv274PMID 26038306PMCID 4566973
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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• Comparison of normalization methods for differential gene expression analysis in RNA-Seq experiments

  2013influential reference
• The R2R3-MYB Transcription Factors MYB14 and MYB15 Regulate Stilbene Biosynthesis in Vitis vinifera[W]

  2013cited by this paper
• Resveratrol and Its Derivatives as Phytoalexins

  2013cited by this paper
• Contributions of roots and rootstocks to sustainable, intensified crop production.

  2013influential reference
• Defective root growth triggered by oxidative stress is controlled through the expression of cell cycle-related genes.

  2012cited by this paper
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  2012cited by this paper
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  2012cited by this paper
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  2012cited by this paper
• Flavonoids as antioxidants in plants: location and functional significance.

  2012cited by this paper
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  2012cited by this paper
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  2012cited by this paper
• A genome-wide cis-regulatory element discovery method based on promoter sequences and gene co-expression networks

  2012cited by this paper
• Achievements and challenges in understanding plant abiotic stress responses and tolerance.

  2011cited by this paper
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  2011cited by this paper
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• Hormone balance and abiotic stress tolerance in crop plants.

  2011cited by this paper
• ABA-mediated transcriptional regulation in response to osmotic stress in plants

  2011cited by this paper
• Influence of abiotic stress signals on secondary metabolites in plants

  2011cited by this paper
• Role of DREBs in regulation of abiotic stress responses in plants.

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  2011influential reference
• Prevention of Catheter-Related Bacteremia with a Daily Ethanol Lock in Patients with Tunnelled Catheters: A Randomized, Placebo-Controlled Trial

  2010cited by this paper
• Rapid Genomic Characterization of the Genus Vitis

  2010cited by this paper
• Sucrose transporters of higher plants.

  2010cited by this paper
• Grapevine under deficit irrigation: hints from physiological and molecular data.

  2010cited by this paper
• Differential expression analysis for sequence count data

  2010cited by this paper
• Biosynthesis, metabolism, molecular engineering, and biological functions of stilbene phytoalexins in plants

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  2010cited by this paper
• Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell.

  2009cited by this paper
• Photosynthesis limitations during water stress acclimation and recovery in the drought-adapted Vitis hybrid Richter-110 (V. berlandierixV. rupestris).

  2009cited by this paper
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  2009cited by this paper
• Recent advances and emerging trends in plant hormone signalling

  2009cited by this paper
• PASS: a program to align short sequences

  2009cited by this paper
• Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

  2008influential reference
• High-throughput functional annotation and data mining with the Blast2GO suite

  2008cited by this paper
• Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata

  2008cited by this paper
• Study on the extraction, purification and quantification of jasmonic acid, abscisic acid and indole-3-acetic acid in plants.

  2008cited by this paper
• The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

  2007influential reference
• Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles

  2007influential reference
• Transcript abundance profiles reveal larger and more complex responses of grapevine to chilling compared to osmotic and salinity stress

  2007cited by this paper
• Sucrose Transporters in Higher Plants

  2006cited by this paper
• A Role for ETR1 in Hydrogen Peroxide Signaling in Stomatal Guard Cells1

  2005cited by this paper
• Comparative Gene Expression Analysis by a Differential Clustering Approach: Application to the Candida albicans Transcription Program

  2005cited by this paper
• Root-to-shoot signalling : Assessing the roles of ‘ up ’ in the up and down world of long-distance signalling in planta

  2005cited by this paper
• Root-To-Shoot Signalling: Assessing The Roles of ‘Up’ In the Up and Down World of Long-Distance Signalling In Planta

  2005cited by this paper
• Reactive oxygen species: metabolism, oxidative stress, and signal transduction.

  2004cited by this paper
• Partial rootzone drying: regulation of stomatal aperture and carbon assimilation in field-grown grapevines (Vitis vinifera cv. Moscatel).

  2003cited by this paper
• Signal transduction in response to excess light: getting out of the chloroplast.

  2002cited by this paper
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  2002cited by this paper
• Are xylem radial development and hydraulic conductivity in downwardly-growing grapevine shoots influenced by perturbed auxin metabolism?

  2002cited by this paper
• How plants cope with water stress in the field. Photosynthesis and growth.

  2002cited by this paper
• The sensitivity of ABI2 to hydrogen peroxide links the abscisic acid-response regulator to redox signalling

  2002cited by this paper
• Role of auxin-induced reactive oxygen species in root gravitropism.

  2001cited by this paper
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  2001cited by this paper
• Isolation, identification, and antioxidant activity of three stilbene glucosides newly extracted from vitis vinifera cell cultures

  1998cited by this paper
• Primary responses of root and leaf elongation to water deficits in the atmosphere and soil solution

  1997cited by this paper
• Crop responses to drought and the interpretation of adaptation

  1996cited by this paper
• VITIS VINIFERA L

  1995cited by this paper

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  2021cites this paper
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  2021cites this paper
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  2020cites this paper
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  2018cites this paper
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