Manual validation of FreeSurfer's automated hippocampal segmentation in normal aging, mild cognitive impairment, and Alzheimer Disease subjects.

No abstract is available for this paper.

• Publication year

  2010

• Venue

  Psychiatry Research

• Publication date

  2010-03-30

• Fields of study

  Medicine, Psychology

• Identifiers
  DOI 10.1016/j.pscychresns.2009.10.011PMID 20153146
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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• Spanish Multicenter Normative Studies (NEURONORMA Project): methods and sample characteristics.

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• Volumetric MRI vs clinical predictors of Alzheimer disease in mild cognitive impairment

  2008cited by this paper
• Combining early markers strongly predicts conversion from mild cognitive impairment to Alzheimer's disease.

  2008cited by this paper
• Research criteria for the diagnosis of Alzheimer's disease: revising the NINCDS-ADRDA criteria.

  2007cited by this paper
• Hippocampal Volume and Shape Analysis in an Older Adult Population

  2007cited by this paper
• Volumetry of amygdala and hippocampus and memory performance in Alzheimer's disease.

  2006influential reference
• Sex and symmetry differences in hippocampal volumetrics: Before and beyond the opening of the crus of the fornix

  2006cited by this paper
• Brain morphology in first-episode schizophrenia: a meta-analysis of quantitative magnetic resonance imaging studies.

  2006cited by this paper
• User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability

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  2006cited by this paper
• Conversion of mild cognitive impairment to Alzheimer disease predicted by hippocampal atrophy maps.

  2006cited by this paper
• Magnetic resonance imaging (MRI) measurement of hippocampal volume in posttraumatic stress disorder: a meta-analysis.

  2005cited by this paper
• Preservation of hippocampal volume throughout adulthood in healthy men and women.

  2005cited by this paper
• Lower hippocampal volume in patients suffering from depression: a meta-analysis.

  2004cited by this paper
• Sequence-independent segmentation of magnetic resonance images.

  2004cited by this paper
• Structural correlates of mild cognitive impairment.

  2004influential reference
• Memory complaints in patients with normal cognition are associated with smaller hippocampal volumes

  2004cited by this paper
• Neuropathological stageing of Alzheimer-related changes

  2004cited by this paper
• Hippocampus and entorhinal cortex in mild cognitive impairment and early AD.

  2004cited by this paper
• A hybrid approach to the skull stripping problem in MRI

  2004cited by this paper
• Aging, sexual dimorphism, and hemispheric asymmetry of the cerebral cortex: replicability of regional differences in volume.

  2004cited by this paper
• Memory systems of the brain: a brief history and current perspective.

  2004cited by this paper
• MRI as a biomarker of disease progression in a therapeutic trial of milameline for AD

  2003cited by this paper
• Diagnostic and Statistical Manual of Mental Disorders (DSM-IV)

  2003cited by this paper
• Early diagnosis of alzheimer's disease: contribution of structural neuroimaging

  2003cited by this paper
• Neurotechnique Whole Brain Segmentation: Automated Labeling of Neuroanatomical Structures in the Human Brain

  2002cited by this paper
• Clinical validity of the 'mini-mental state' for Spanish speaking communities.

  2001cited by this paper
• Volumetry of hippocampus and amygdala with high-resolution MRI and three-dimensional analysis software: minimizing the discrepancies between laboratories.

  2000cited by this paper
• Diagnosis of Alzheimer's disease: MRI of the hippocampus vs delayed recall.

  2000cited by this paper
• Medial temporal atrophy and memory impairment in early stage of Alzheimer's disease: an MRI volumetric and memory assessment study.

  2000cited by this paper
• Volumes of medial temporal lobe structures in patients with Alzheimer's disease and mild cognitive impairment (and in healthy controls).

  1998cited by this paper
• Clinical Validity and Utility of the Interview for Deterioration of Daily Living in Dementia for Spanish-Speaking Communities

  1998cited by this paper
• The Interview for Deterioration in Daily Living Activities in Dementia: Agreement Between Primary and Secondary Caregivers

  1997cited by this paper
• Aging-Associated Cognitive Decline

  1994cited by this paper
• Aging-associated cognitive decline. Working Party of the International Psychogeriatric Association in collaboration with the World Health Organization.

  1994cited by this paper
• Statistical methods for assessing agreement between two methods of clinical measurement.

  1986cited by this paper
• Clinical diagnosis of Alzheimer's disease

  1984influential reference
• The Global Deterioration Scale for assessment of primary degenerative dementia.

  1982cited by this paper
• “Mini-mental state”: A practical method for grading the cognitive state of patients for the clinician

  1975cited by this paper
• AKUFO AND IBARAPA.

  1965cited by this paper

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• Comparative assessment of established and deep learning‐based segmentation methods for hippocampal volume estimation in brain magnetic resonance imaging analysis

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• Is Hippocampal Volume a Relevant Early Marker of Dementia?

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• Validating ASHS-T1 automated entorhinal and transentorhinal cortical segmentation in Alzheimer's disease.

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• Standardizing MRI orientation improves reliability of entorhinal and transentorhinal cortical volume measurement.

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• Longitudinal volumetric evaluation of hippocampus and amygdala subregions in recent trauma survivors

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• Deriving a robust deep‐learning model for subcortical brain segmentation by using a large‐scale database: Preprocessing, reproducibility, and accuracy of volume estimation

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• Validation of an automatic tool for the rapid measurement of brain atrophy and white matter hyperintensity: QyScore®

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• Agreement Between Automated and Manual MRI Volumetry in Alzheimer's Disease: A Systematic Review and Meta‐Analysis

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• Diagnostic Performance of Automated MRI Volumetry by icobrain dm for Alzheimer’s Disease in a Clinical Setting: A REMEMBER Study

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  2020cites this paper
• Differences in callosal and subcortical volumes and associated neurobehavioural deficits in children with prenatal alcohol exposure

  2019influential citation
• Neuroanatomical Risk Factors for Posttraumatic Stress Disorder in Recent Trauma Survivors.

  2019cites this paper
• The impact of hippocampal segmentation methods on correlations with clinical data

  2019cites this paper
• Neuroanatomical Risk Factors for Post Traumatic Stress Disorder (PTSD) in Recent Trauma Survivors

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  2018cites this paper
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• Motion‐related artifacts in structural brain images revealed with independent estimates of in‐scanner head motion

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• Simultaneous PET-MRI Studies of the Concordance of Atrophy and Hypometabolism in Syndromic Variants of Alzheimer’s Disease and Frontotemporal Dementia: An Extended Case Series

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