Large-scale genotyping of complex DNA

No abstract is available for this paper.

• Publication year

  2003

• Venue

  Nature Biotechnology

• Publication date

  2003-09-07

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1038/nbt869PMID 12960966
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Methods for genotyping single nucleotide polymorphisms.

  2003cited by this paper
• Algorithms for large-scale genotyping microarrays

  2003cited by this paper
• Paternal origins of complete hydatidiform moles proven by whole genome single-nucleotide polymorphism haplotyping.

  2002cited by this paper
• The Structure of Haplotype Blocks in the Human Genome

  2002cited by this paper
• Ethnic-difference markers for use in mapping by admixture linkage disequilibrium.

  2002cited by this paper
• Patterns of linkage disequilibrium in the human genome

  2002cited by this paper
• Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21

  2001cited by this paper
• Genome of the apes.

  2001cited by this paper
• A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

  2001cited by this paper
• Accessing genetic variation: genotyping single nucleotide polymorphisms

  2001cited by this paper
• Flexible use of high-density oligonucleotide arrays for single-nucleotide polymorphism discovery and validation.

  2001cited by this paper
• Rank-based algorithms for anlaysis of microarrays

  2001cited by this paper
• Estimation of admixture and detection of linkage in admixed populations by a Bayesian approach: application to African‐American populations

  2000cited by this paper
• Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arrays

  2000cited by this paper
• An SNP map of the human genome generated by reduced representation shotgun sequencing

  2000cited by this paper
• Mining SNPs from EST databases.

  1999cited by this paper
• Determination of ancestral alleles for human single-nucleotide polymorphisms using high-density oligonucleotide arrays

  1999cited by this paper
• Characterization of single-nucleotide polymorphisms in coding regions of human genes

  1999cited by this paper
• Characterization of single-nucleotide polymorphisms in coding regions of human genes

  1999cited by this paper
• High density synthetic oligonucleotide arrays

  1999cited by this paper
• Genetic analysis using genomic representations.

  1998cited by this paper
• Estimating African American admixture proportions by use of population-specific alleles.

  1998cited by this paper
• A DNA polymorphism discovery resource for research on human genetic variation.

  1998cited by this paper
• Genetic Data Analysis II.

  1997cited by this paper
• The History and Geography of Human Genes

  1996cited by this paper
• Genetic Data Analysis II . By Bruce S. Weir, Sunderland, Massachusetts. Sinauer Associates, Inc.445 pages. ISBN 0-87893-902-4.

  1996cited by this paper
• AFLP: a new technique for DNA fingerprinting.

  1995cited by this paper
• Linkage disequilibrium in admixed populations: applications in gene mapping.

  1994cited by this paper
• Cloning the differences between two complex genomes

  1993cited by this paper
• Drift, admixture, and selection in human evolution: a study with DNA polymorphisms.

  1991cited by this paper
• Silhouettes: a graphical aid to the interpretation and validation of cluster analysis

  1987cited by this paper
• Is the most frequent allele the oldest?

  1977cited by this paper

• A high-throughput screening method for selecting feature SNPs to evaluate breed diversity and infer ancestry

  2025cites this paper
• Isothermal Biosensor for Highly Specific Detection of Single-Base Mutations Based on Peptide Nucleic Acid and Graphene Oxide

  2025cites this paper
• Genomic predictions for resistance to Aeromonas hydrophila in pacu (Piaractus mesopotamicus)

  2024cites this paper
• Genomic structural variants analysis in leukemia by a novel cytogenetic technique: Optical genome mapping

  2024cites this paper
• Enhancing animal breeding through quality control in genomic data - a review

  2024cites this paper
• Techniques, procedures, and applications in host genetic analysis.

  2024cites this paper
• QTL Mapping for Agronomic Important Traits in Well-Adapted Wheat Cultivars

  2024cites this paper
• Low-cost and clinically applicable copy number profiling using repeat DNA

  2022cites this paper
• Genotyping Platforms for Genome-Wide Association Studies: Options and Practical Considerations.

  2022cites this paper
• Genomic medicine on the frontier of precision medicine

  2021cites this paper
• Bench Research Informed by GWAS Results

  2021cites this paper
• Discrimination of a single nucleotide polymorphism in the haptoglobin promoter region, rs5472, using a competitive fluorophore-labeled probe hybridization assay following loop-mediated isothermal amplification.

  2021cites this paper
• Initialization methods for optimum average silhouette width clustering

  2021cites this paper
• KINETICS OF NUCLEIC ACIDS HYBRIDIZATION AND OF COMPLEX DNA STRUCTURES FORMATION ON A BIOSENSING SURFACE

  2021cites this paper
• Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing

  2020cites this paper
• Improving Water Stress Resilient Crop Breeding Using Phenomics and Genomics Information Derived fromSorghum (SorghumbicolorL.)

  2020cites this paper
• A Set of Efficient Methods to Generate High-Dimensional Binary Data With Specified Correlation Structures

  2020cites this paper
• Clustering by Optimizing the Average Silhouette Width

  2019cites this paper
• Molecular Methods

  2019cites this paper
• An agglomerative hierarchical clustering method by optimizing the average silhouette width

  2019cites this paper
• Optimum average silhouette width clustering methods

  2019cites this paper
• Applied Human Genetic Epidemiology.

  2018cites this paper
• Biostatistics for Human Genetic Epidemiology

  2018cites this paper
• Polymorphisms

  2018cites this paper
• Genomics and pharmacogenomics of pediatric acute lymphoblastic leukemia.

  2018cites this paper
• Assessment of genotyping tools applied in genetic susceptibility studies of periodontal disease: A systematic review.

  2018cites this paper
• Clustering Biological Data

  2018cites this paper
• Single haplotype admixture models using large scale HLA genotype frequencies to reproduce human admixture

  2018cites this paper
• A strongly pairing fifth base: oligonucleotides with a C-nucleoside replacing thymidine

  2018cites this paper
• Low-cost and clinically applicable copy number profiling using repeat DNA

  2018cites this paper
• Explorer Fish scales and SNP chips : SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon ( Salmo salar )

  2017cites this paper
• Mutations of the aminoacyl‐tRNA‐synthetases SARS and WARS2 are implicated in the etiology of autosomal recessive intellectual disability

  2017cites this paper
• Genomic microarray technologies for the cytogenetics laboratory

  2017cites this paper
• Detection of trace amounts of target DNA from massive background of nucleic acids by using the LM‐PCR‐based preamplification method

  2017cites this paper
• DNA Microarrays and Genetic Testing

  2017cites this paper
• High-density genetic map construction and QTLs identification for plant height in white jute (Corchorus capsularis L.) using specific locus amplified fragment (SLAF) sequencing

  2017cites this paper
• Genetic Analysis of Drought Tolerant Early Maturing White Maize (Zea Mays L.) Inbreds with Striga Resistance Genes from Zea Diploperennis

  2017cites this paper
• Efficiency of SNP and SSR-based analysis of genetic diversity, population structure, and relationships among cowpea (Vigna unguiculata (L.) Walp.) germplasm from East Africa and IITA inbred lines

  2017cites this paper
• High-Density Genetic Linkage Map Construction and Quantitative Trait Locus Mapping for Hawthorn (Crataegus pinnatifida Bunge)

  2017cites this paper
• Detecting the QTL-allele system of seed isoflavone content in Chinese soybean landrace population for optimal cross design and gene system exploration

  2016cites this paper
• Molecular and clinical characterization of de novo and familial cases with microduplication 3q29

  2016cites this paper
• A High-Density Genetic Linkage Map for Cucumber (Cucumis sativus L.): Based on Specific Length Amplified Fragment (SLAF) Sequencing and QTL Analysis of Fruit Traits in Cucumber

  2016cites this paper
• Reaping the Benefits of Next-generation Sequencing Technologies for Crop Improvement — Solanaceae

  2016cites this paper
• Genetic Association Studies of Suicidal Behavior: A Review of the Past 10 Years, Progress, Limitations, and Future Directions

  2016cites this paper
• Robust logistic regression to narrow down the winner’s curse for rare and recessive susceptibility variants

  2016cites this paper
• Transcriptomic SNP discovery for custom genotyping arrays: impacts of sequence data, SNP calling method and genotyping technology on the probability of validation success

  2016cites this paper
• Genome Wide Sampling Sequencing for SNP Genotyping: Methods, Challenges and Future Development

  2016cites this paper
• Clustering approach to protein folding problem and dynamics of the tropical atmosphere

  2016cites this paper
• Statistical Analysis of GWAS

  2016cites this paper
• Phenotypes and Genotypes

  2016cites this paper
• A molecular beacon microarray based on a quantum dot label for detecting single nucleotide polymorphisms.

  2016cites this paper
• CCNJ detected by triple combination array analysis as a tumor-related gene of hepatocellular carcinoma.

  2015cites this paper
• MUSIC PERCEPTI ON AND PERFORMANCE

  2015cites this paper
• Genomic-Wide Analysis with Microarrays in Human Oncology

  2015cites this paper
• Using specific length amplified fragment sequencing to construct the high-density genetic map for Vitis (Vitis vinifera L. × Vitis amurensis Rupr.)

  2015cites this paper
• Veterinary Infection Biology: Molecular Diagnostics and High-Throughput Strategies

  2015cites this paper
• Sickle Cell Anaemia: Errors in Haemoglobin Genotyping: Impact on Parents of Children Attending Two Hospitals in South East Nigeria

  2015cites this paper
• Genomic correlates of recombination rate and its variability across eight recombination maps in the western honey bee (Apis mellifera L.)

  2015cites this paper
• Genotyping of Single Nucleotide Polymorphisms

  2015cites this paper
• Multiplexed genotyping of Bacillus anthracis by Luminex xMap suspension array.

  2015cites this paper
• Allele frequency calibration for SNP based genotyping of DNA pools: A regression based local-global error fusion method

  2015cites this paper
• Development of low-density oligonucleotide microarrays for detecting mutations causing Wilson's disease

  2015cites this paper
• ITALICS package : GeneChip Mapping 100K and 500K Set Normalization

  2015influential citation
• SNP Array in Hematopoietic Neoplasms: A Review

  2015cites this paper
• Genomics approaches to study music perception and performance

  2015cites this paper
• Genomic Profiling of Familial Early-Age of Onset Breast Cancer

  2015cites this paper
• PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations

  2015cites this paper
• Genotyping and quantification techniques for single-nucleotide polymorphisms

  2015cites this paper
• [Progress in genetic research of human height].

  2015cites this paper
• Colorimetric detection of single nucleotide polymorphisms in the presence of 10³-fold excess of a wild-type gene.

  2015cites this paper
• Entwicklung und Implementierung von Auswertungswerkzeugen für Hochdurchsatz-DNA-Kopienzahl-Analysen und deren Anwendung auf Lymphomdaten

  2014cites this paper
• Genetic Analysis of Meiotic Drive Systems in the Mouse Using Genotyping Arrays

  2014cites this paper
• A hierarchical learning approach to calibrate allele frequencies for SNP based genotyping of DNA pools

  2014influential citation
• Microarray-Based Investigations in Cancer

  2014cites this paper
• Identifying Genes Responsible for Intellectual Disability in Consanguineous Families

  2014cites this paper
• Visual detection of DNA on paper chips.

  2014cites this paper
• Identifying differential expression genes and single nucleotide variations using RNA-seq in metastatic melanoma.

  2014cites this paper
• A High-Density Genetic Map for Soybean Based on Specific Length Amplified Fragment Sequencing

  2014cites this paper
• Genetic Analysis and Cell Manipulation on Microfluidic Surfaces

  2014cites this paper
• Development of the catfish 250K SNP array for genome-wide association studies

  2014cites this paper
• Predicting HLA genotypes using unphased and flanking single-nucleotide polymorphisms in Han Chinese population

  2014cites this paper
• Closed-tube human leukocyte antigen DQA1∗05 genotyping assay based on switchable lanthanide luminescence probes.

  2014cites this paper
• Structural variations in plant genomes

  2014cites this paper
• SLAF-seq: An Efficient Method of Large-Scale De Novo SNP Discovery and Genotyping Using High-Throughput Sequencing

  2013cites this paper
• A multiplex bead-based suspension array assay for interrogation of phylogenetically informative single nucleotide polymorphisms for Bacillus anthracis.

  2013cites this paper
• RYR1 mutations as a cause of ophthalmoplegia, facial weakness, and malignant hyperthermia.

  2013cites this paper
• Marker-assisted selection for maize streak virus resistance and concomitant conventional selection for Downy Mildew resistance in a maize population.

  2013cites this paper
• Comparison of the Performance of Two Commercial Genome-Wide Association Study Genotyping Platforms in Han Chinese Samples

  2013cites this paper
• SNP Genotyping Technologies

  2013cites this paper
• SNP array technology: an array of hope in breast cancer research.

  2013cites this paper
• A CMOS Cantilever-Based Label-Free DNA SoC With Improved Sensitivity for Hepatitis B Virus Detection

  2013cites this paper
• Genetic diagnosis prevention and molecular pathophysiology of duchenne muscular dystrophy and non invasive diagnosis of familial neuromuscular disorders

  2013cites this paper
• The easy road to genome‐wide medium density SNP screening in a non‐model species: development and application of a 10 K SNP‐chip for the house sparrow (Passer domesticus)

  2013cites this paper
• Genome-Wide Association Study Reveals Host Genetic Factors for Liver Diseases

  2013influential citation
• Genetic Analysis of Striga Resistance and Low Soil Nitrogen Tolerance in Early Maturing Maize (Zea mays L.) Inbred Lines

  2013cites this paper
• Integrated Linkage Map of Haliotis midae Linnaeus Based on Microsatellite and SNP Markers

  2013cites this paper
• Mapping genes underlying ethnic differences in tuberculosis risk by linkage disequilibrium in the South African coloured population of the Western Cape

  2013cites this paper
• Switchable lanthanide fluorescence probes in homogenous molecular diagnostics

  2013cites this paper
• A pilot genome wide association and gene expression array study of suicide with and without major depression

  2013cites this paper
• Genetic elucidation of autosomal recessive intellectual disability

  2013cites this paper