Complex patterns of host switching in New World arenaviruses

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Molecular Ecology

• Publication date

  2012-08-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/j.1365-294X.2012.05663.xPMID 22693963
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Time‐dependent rates of molecular evolution

  2011cited by this paper
• Novel Arenavirus Sequences in Hylomyscus sp. and Mus (Nannomys) setulosus from Côte d'Ivoire: Implications for Evolution of Arenaviruses in Africa

  2011influential reference
• Transferrin receptor 1 in the zoonosis and pathogenesis of New World hemorrhagic fever arenaviruses

  2011cited by this paper
• Host specificity in phylogenetic and geographic space.

  2011cited by this paper
• Sympatric Occurrence of 3 Arenaviruses, Tanzania

  2010cited by this paper
• Phylogenetic Analysis Reveals Rapid Evolutionary Dynamics in the Plant RNA Virus Genus Tobamovirus

  2010cited by this paper
• Island Biogeography Reveals the Deep History of SIV

  2010cited by this paper
• Zoonotic aspects of arenavirus infections.

  2010cited by this paper
• Endogenous Viral Elements in Animal Genomes

  2010cited by this paper
• Structural basis for receptor recognition by New World hemorrhagic fever arenaviruses

  2010influential reference
• POOR STATISTICAL PERFORMANCE OF THE MANTEL TEST IN PHYLOGENETIC COMPARATIVE ANALYSES

  2010influential reference
• IUCN Red List of Threatened Species

  2010cited by this paper
• Endogenous non-retroviral RNA virus elements in mammalian genomes

  2010cited by this paper
• A Multivalent Vaccination Strategy for the Prevention of Old World Arenavirus Infection in Humans

  2010cited by this paper
• Endogenous non-retroviral RNA virus elements in mammalian genomes

  2010cited by this paper
• Host-Species Transferrin Receptor 1 Orthologs Are Cellular Receptors for Nonpathogenic New World Clade B Arenaviruses

  2009influential reference
• Genetic Detection and Characterization of Lujo Virus, a New Hemorrhagic Fever–Associated Arenavirus from Southern Africa

  2009influential reference
• Receptor binding and cell entry of Old World arenaviruses reveal novel aspects of virus-host interaction.

  2009influential reference
• A Multivalent and Cross-Protective Vaccine Strategy against Arenaviruses Associated with Human Disease

  2009cited by this paper
• Basolateral Entry and Release of New and Old World Arenaviruses from Human Airway Epithelia

  2008cited by this paper
• Identification of a Broad-Spectrum Arenavirus Entry Inhibitor

  2008cited by this paper
• Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence.

  2008cited by this paper
• Phylogenetics Phylocom : software for the analysis of phylogenetic community structure and trait evolution

  2008cited by this paper
• Receptor use by the Whitewater Arroyo virus glycoprotein.

  2008cited by this paper
• Chapare Virus, a Newly Discovered Arenavirus Isolated from a Fatal Hemorrhagic Fever Case in Bolivia

  2008cited by this paper
• Rates of evolutionary change in viruses: patterns and determinants

  2008cited by this paper
• A new arenavirus in a cluster of fatal transplant-associated diseases.

  2008cited by this paper
• Evolutionary history and phylogeography of human viruses.

  2008influential reference
• Receptor determinants of zoonotic transmission of New World hemorrhagic fever arenaviruses

  2008influential reference
• Phylocom: software for the analysis of phylogenetic community structure and trait evolution

  2008cited by this paper
• Transferrin receptor 1 is a cellular receptor for New World haemorrhagic fever arenaviruses

  2007cited by this paper
• COPYCAT : cophylogenetic analysis tool

  2007cited by this paper
• Geographic Patterns of Genetic Variation and Conservation Consequences in Three South American Rodents

  2007cited by this paper
• Arenaviruses

  2007cited by this paper
• BMC Evolutionary Biology BioMed Central

  2007cited by this paper
• New World Clade B Arenaviruses Can Use Transferrin Receptor 1 (TfR1)-Dependent and -Independent Entry Pathways, and Glycoproteins from Human Pathogenic Strains Are Associated with the Use of TfR1

  2007cited by this paper
• AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa

  2007influential reference
• Principal host relationships and evolutionary history of the North American arenaviruses.

  2007influential reference
• Lassa fever in West African sub-region: an overview.

  2007cited by this paper
• Serological Survey for Viral Pathogens in Turkish Rodents

  2006cited by this paper
• Traversing the tangle: Algorithms and applications for cophylogenetic studies

  2006cited by this paper
• Parana, a new tacaribe complex virus from Paraguay

  2005cited by this paper
• The arenaviruses.

  2005influential reference
• New fast and accurate heuristics for inference of large phylogenetic trees

  2004influential reference
• Phylogeny of muroid rodents: relationships within and among major lineages as determined by IRBP gene sequences.

  2004cited by this paper
• L'évolution des Arenaviridae et de leurs hôtes muridés résulte-t-elle d'évènements de capture ou de processus de coévolution ?

  2003cited by this paper
• MrBayes 3: Bayesian phylogenetic inference under mixed models

  2003influential reference
• A cophylogenetic perspective of RNA-virus evolution.

  2003cited by this paper
• Molecular Clocks and the Puzzle of RNA Virus Origins

  2003cited by this paper
• New insights into the evolutionary relationships between arenaviruses provided by comparative analysis of small and large segment sequences.

  2003cited by this paper
• A statistical test for host-parasite coevolution.

  2002influential reference
• Hemorrhagic fever viruses as biological weapons: medical and public health management.

  2002cited by this paper
• Mammalian reservoirs of arenaviruses.

  2002influential reference
• Hemorrhagic fever occurs after intravenous, but not after intragastric, inoculation of rhesus macaques with lymphocytic choriomeningitis virus

  2002cited by this paper
• Bear Canyon Virus: An Arenavirus Naturally Associated with the California Mouse (Peromyscus californicus)

  2002cited by this paper
• High genetic divergence and recombination in Arenaviruses from the Americas.

  2002cited by this paper
• New World Arenavirus Clade C, but Not Clade A and B Viruses, Utilizes α-Dystroglycan as Its Major Receptor

  2002cited by this paper
• Phylogeny of New World arenaviruses based on the complete coding sequences of the small genomic segment identified an evolutionary lineage produced by intrasegmental recombination.

  2002influential reference
• Preferential host switching by primate lentiviruses can account for phylogenetic similarity with the primate phylogeny.

  2002cited by this paper
• The Whitewater Arroyo virus: natural evidence for genetic recombination among Tacaribe serocomplex viruses (family Arenaviridae).

  2001influential reference
• DAMBE: software package for data analysis in molecular biology and evolution.

  2001influential reference
• Evolution of the Old World Arenaviridae and their rodent hosts: generalized host-transfer or association by descent?

  2001influential reference
• A Generalized Permutation Model for the Analysis of Cross-Species Data

  2001cited by this paper
• Analytical approaches to measuring cospeciation of host and parasites: through a glass, darkly.

  2001cited by this paper
• New Arenavirus Blamed for Recent Deaths in California

  2000cited by this paper
• Comparison of permutation methods for the partial correlation and partial mantel tests

  2000cited by this paper
• Guanarito virus (Arenaviridae) isolates from endemic and outlying localities in Venezuela: sequence comparisons among and within strains isolated from Venezuelan hemorrhagic fever patients and rodents.

  2000cited by this paper
• The Role of Rodents in Emerging Human Disease : Examples from the Hantaviruses and Arenaviruses

  1999influential reference
• MODELTEST: testing the model of DNA substitution

  1998cited by this paper
• Identification of alpha-dystroglycan as a receptor for lymphocytic choriomeningitis virus and Lassa fever virus.

  1998cited by this paper
• Molecular systematics and paleobiogeography of the South American sigmodontine rodents.

  1998cited by this paper
• Phylogenetic analysis of the Arenaviridae: patterns of virus evolution and evidence for cospeciation between arenaviruses and their rodent hosts.

  1997influential reference
• RNA virus mutations and fitness for survival.

  1997cited by this paper
• African Arenaviruses - Coevolution between virus and murid host?

  1997influential reference
• Lymphocytic choriomeningitis virus in southern France: Four case reports and a review of the literature

  1997influential reference
• The phylogeny of New World (Tacaribe complex) arenaviruses.

  1996cited by this paper
• Genetic characterization and phylogeny of Sabiá virus, an emergent pathogen in Brazil.

  1996cited by this paper
• RODENT-BORNE HEMORRHAGIC FEVER VIRUSES: A SPECIAL RISK FOR MAMMALOGISTS?

  1995cited by this paper
• Prospects for the control of Bolivian hemorrhagic fever.

  1995cited by this paper
• Controlling the false discovery rate: a practical and powerful approach to multiple testing

  1995cited by this paper
• Prevalence of infection with Junin virus in rodent populations in the epidemic area of Argentine hemorrhagic fever.

  1994cited by this paper
• Ecology and Epidemiology of Arenaviruses and Their Hosts

  1993influential reference
• The Phylogenetic Perspective. (Book Reviews: Phylogeny, Ecology, and Behavior. A Research Program in Comparative Biology.)

  1991cited by this paper
• Phylogeny, ecology, and behavior: A research program in comparative biology

  1991cited by this paper
• A prospective study of the epidemiology and ecology of Lassa fever.

  1987cited by this paper
• Two epizootics of lymphocytic choriomeningitis virus occurring in laboratory mice despite intensive monitoring programs.

  1984cited by this paper
• Parasite communities: the roles of phylogeny and ecology.

  1980cited by this paper
• The potential role of Syrian hamsters and other small animals as reservoirs of lymphocytic choriomeningitis virus.

  1979cited by this paper
• Murine lymphocytic choriomeningitis: the history of a natural cross-infection from wild to laboratory mice

  1977cited by this paper
• The structure of rodent faunas associated with arenaviral infections.

  1975cited by this paper
• Laboratory studies of a lymphocytic choriomeningitis virus outbreak in man and laboratory animals.

  1975cited by this paper
• Lassa fever. Epidemiological aspects of the 1970 epidemic, Jos, Nigeria.

  1972cited by this paper
• Tacaribe virus, a new agent isolated from Artibeus bats and mosquitoes in Trinidad, West Indies.

  1963cited by this paper

• Ecologic Traits Analysis for Identifying Rodent Hosts for Arenavirus and Hepacivirus in the Americas

  2025cites this paper
• A review of emerging health threats from zoonotic New World mammarenaviruses

  2024cites this paper
• Subspecific rodent taxa as the relevant host taxonomic level for mammarenavirus host specificity.

  2023cites this paper
• Mammarenavirus Genetic Diversity and Its Biological Implications.

  2023cites this paper
• RNA virus diversity in rodents

  2023cites this paper
• A Review of Mammarenaviruses and Rodent Reservoirs in the Americas

  2022influential citation
• Human genes with codon usage bias similar to that of the nonstructural protein 1 gene of influenza A viruses are conjointly involved in the infectious pathogenesis of influenza A viruses

  2022cites this paper
• Phylodynamics and Codon Usage Pattern Analysis of Broad Bean Wilt Virus 2

  2021cites this paper
• COVID-19 Pandemic Simulation Studies on the Transmissibility

  2020cites this paper
• Comprehensive codon usage analysis of rice black-streaked dwarf virus based on P8 and P10 protein coding sequences.

  2020cites this paper
• Simulation Algorithms for The Transmissibility to Evaluate Novel Coronavirus Pandemic

  2020cites this paper
• Genetic changes and host adaptability in sugarcane mosaic virus based on complete genome sequences.

  2020cites this paper
• Hemorrhagic Fever-Causing Arenaviruses: Lethal Pathogens and Potent Immune Suppressors

  2019cites this paper
• Lassa virus diversity and feasibility for universal prophylactic vaccine

  2019cites this paper
• Analysis of Synonymous Codon Usage Bias in Potato Virus M and Its Adaption to Hosts

  2019cites this paper
• Arenavirus genomics: novel insights into viral diversity, origin, and evolution.

  2019cites this paper
• Virome profiling of rodents in Xinjiang Uygur Autonomous Region, China: Isolation and characterization of a new strain of Wenzhou virus.

  2019cites this paper
• Temporal analysis and adaptive evolution of the global population of potato virus M.

  2019cites this paper
• Detection of Latino virus (Arenaviridae: Mammarenavirus) naturally infecting Calomys callidus.

  2018cites this paper
• Ancient Evolution of Mammarenaviruses: Adaptation via Changes in the L Protein and No Evidence for Host–Virus Codivergence

  2018cites this paper
• Xapuri virus, a novel mammarenavirus: natural reassortment and increased diversity between New World viruses

  2018cites this paper
• Global patterns in coronavirus diversity

  2017cites this paper
• Strong spatial‐genetic congruence between a wood‐feeding cockroach and its bacterial endosymbiont, across a topographically complex landscape

  2017influential citation
• Virus hébergés par les rongeurs en Guyane française.

  2017cites this paper
• Arenaviruses: mechanisms of antibody-mediated neutralization and an alternative route of entry

  2017influential citation
• New World Arenavirus Biology.

  2017cites this paper
• Differences in Glycoprotein Complex Receptor Binding Site Accessibility Prompt Poor Cross-Reactivity of Neutralizing Antibodies between Closely Related Arenaviruses

  2017cites this paper
• Quasispecies: From Theory to Experimental Systems

  2016cites this paper
• New Hosts of The Lassa Virus

  2016cites this paper
• Evidence of human infection by a new mammarenavirus endemic to Southeastern Asia

  2016cites this paper
• The Importance of Mammalogy, Infectious Disease Research, and Biosafety in the Field

  2016cites this paper
• Diet Evolution and Clade Richness in Hexapoda: A Phylogenetic Study of Higher Taxa

  2015cites this paper
• Diversification in the Hexapoda : a molecular phylogenetic perspective

  2015cites this paper
• Arenavirus Quasispecies and Their Biological Implications

  2015cites this paper
• Lassa Serology in Natural Populations of Rodents and Horizontal Transmission

  2014cites this paper
• Replication of Boid Inclusion Body Disease-Associated Arenaviruses Is Temperature Sensitive in both Boid and Mammalian Cells

  2014cites this paper
• White-Nose Syndrome Fungus: A Generalist Pathogen of Hibernating Bats

  2014cites this paper
• Lassa Fever: A rodent-human interaction

  2014cites this paper
• HOST SWITCHING PROMOTES DIVERSITY IN HOST‐SPECIALIZED MYCOPARASITIC FUNGI: UNCOUPLED EVOLUTION IN THE BIATOROPSIS‐USNEA SYSTEM

  2014cites this paper
• Arenavirus Variations Due to Host-Specific Adaptation

  2013cites this paper
• Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution.

  2013cites this paper
• Serological Assays Based on Recombinant Viral Proteins for the Diagnosis of Arenavirus Hemorrhagic Fevers

  2012cites this paper