Alu RNA transcripts in human embryonal carcinoma cells. Model of post-transcriptional selection of master sequences.

No abstract is available for this paper.

• Publication year

  1992

• Venue

  Journal of Molecular Biology

• Publication date

  1992-08-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/0022-2836(92)90626-UPMID 1507221
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• The Alu family developed through successive waves of fixation closely connected with primate lineage history

  2005cited by this paper
• Existence of at least three distinct Alu subfamilies

  2005cited by this paper
• Evolution of the master Alu gene(s)

  1991cited by this paper
• Shaping and reshaping of salmonid genomes by amplification of tRNA-derived retroposons during evolution.

  1991cited by this paper
• A de novo Alu insertion results in neurofibromatosis type 1

  1991cited by this paper
• Alu RNA secondary structure consists of two independent 7 SL RNA-like folding units.

  1991cited by this paper
• Germ cell-specific expression of a gene encoding eukaryotic translation elongation factor 1 alpha (eEF-1 alpha) and generation of eEF-1 alpha retropseudogenes in Xenopus laevis.

  1991cited by this paper
• Inactivation of the cholinesterase gene by Alu insertion: possible mechanism for human gene transposition.

  1991cited by this paper
• DNA methylation inhibits transcription indirectly via a methyl-CpG binding protein.

  1991cited by this paper
• Evolution of mouse B1 repeats: 7SL RNA folding pattern conserved

  1991cited by this paper
• Demethylation of CpG islands in embryonic cells

  1991cited by this paper
• Reverse transcriptase encoded by a human transposable element.

  1991cited by this paper
• Reconstruction and analysis of human alu genes

  1991cited by this paper
• Human Alu subfamilies and their methylation revealed by blot hybridization.

  1991cited by this paper
• Retroposons--seeds of evolution.

  1991cited by this paper
• DNA methylation inhibits transcription by RNA polymerase III of a tRNA gene, but not of a 5S rRNA gene

  1990cited by this paper
• Base mispair extension kinetics. Comparison of DNA polymerase alpha and reverse transcriptase.

  1990cited by this paper
• Structure and variability of recently inserted Alu family members.

  1990cited by this paper
• Absence of methylation at HpaII sites in three human genomic tRNA sequences.

  1990cited by this paper
• Origin and evolution of retroelements based upon their reverse transcriptase sequences.

  1990cited by this paper
• Reverse transcriptase activity from human embryonal carcinoma cells NTera2D1.

  1990cited by this paper
• Shedding light on PCR contamination

  1990cited by this paper
• The most abundant nascent poly(A) + RNAs are transcribed by RNA polymerase III in murine tumor cells.

  1990cited by this paper
• Synthesis and processing of small B2 transcripts in mouse embryonal carcinoma cells

  1990cited by this paper
• Recently transposed Alu repeats result from multiple source genes.

  1990cited by this paper
• Clusters of intragenic Alu repeats predispose the human C1 inhibitor locus to deleterious rearrangements.

  1990cited by this paper
• A transpositionally and transcriptionally competent Alu subfamily

  1990cited by this paper
• In vivo transcription of a cloned prosimian primate SINE sequence.

  1989cited by this paper
• SINEs: Short interspersed repeated DNA elements in higher eucaryotes.

  1989cited by this paper
• Newly arisen DNA repeats in primate phylogeny.

  1989cited by this paper
• A retroposon-like short repetitive DNA element in the genome of the human blood fluke, Schistosoma mansoni

  1989cited by this paper
• Regulation of RNA polymerase III transcription in response to F9 embryonal carcinoma stem cell differentiation.

  1989cited by this paper
• Sequence conservation in Alu evolution.

  1989cited by this paper
• Successive waves of fixation of B1 variants in rodent lineage history

  1989cited by this paper
• A fundamental division in the Alu family of repeated sequences.

  1988cited by this paper
• Identification of a repeated sequence in the genome of the sea urchin which is transcribed by RNA polymerase III and contains the features of a retroposon.

  1988cited by this paper
• Recently amplified Alu family members share a common parental Alu sequence

  1988cited by this paper
• Sources and evolution of human Alu repeated sequences.

  1988cited by this paper
• CpG islands as gene markers in the vertebrate nucleus

  1987cited by this paper
• First-strand cDNA synthesis primed with oligo(dT).

  1987cited by this paper
• Recent insertion of an alu sequence in the beta-globin gene cluster of the gorilla

  1987cited by this paper
• Competitive and cooperative functioning of the anterior and posterior promoter elements of an Alu family repeat

  1986cited by this paper
• Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information.

  1986cited by this paper
• L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein

  1986cited by this paper
• Transcriptional inactivity of Alu repeats in HeLa cells.

  1986cited by this paper
• 4.5S RNA is encoded by hundreds of tandemly linked genes, has a short half-life, and is hydrogen bonded in vivo to poly(A)-terminated RNAs in the cytoplasm of cultured mouse cells

  1986cited by this paper
• A highly reiterated family of transcribed oligo(A)-terminated, interspersed DNA elements in the genome of Bombyx mori.

  1986cited by this paper
• Upstream sequences modulate the internal promoter of the human 7SL RNA gene

  1985cited by this paper
• Insertion of an Alu SINE in the human homologue of the Mlvi-2 locus.

  1985cited by this paper
• An Ubiquitous Interspersed DNA Sequence Family in an Insect

  1985cited by this paper
• The Evolution of Interspersed Repetitive DNA Sequences in Mammals and Other Vertebrates

  1985cited by this paper
• The origin and evolution of retroposons.

  1985cited by this paper
• Expression of a cytoplasmic LINE-1 transcript is regulated in a human teratocarcinoma cell line.

  1985cited by this paper
• Pluripotent embryonal carcinoma clones derived from the human teratocarcinoma cell line Tera-2. Differentiation in vivo and in vitro.

  1984cited by this paper
• Retinoic acid induces neuronal differentiation of a cloned human embryonal carcinoma cell line in vitro.

  1984cited by this paper
• Alu sequences are processed 7SL RNA genes

  1984cited by this paper
• Transcription in vivo of an Alu family member upstream from the human ε-globin gene

  1984cited by this paper
• Transcription in vivo of an Alu family member upstream from the human epsilon-globin gene.

  1984cited by this paper
• Human genes and pseudogenes for the 7SL RNA component of signal recognition particle.

  1984cited by this paper
• A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

  1983cited by this paper
• A simple and very efficient method for generating cDNA libraries.

  1983cited by this paper
• Transcripts regulated during normal embryonic development and oncogenic transformation share a repetitive element.

  1983cited by this paper
• Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts?

  1981cited by this paper
• Analysis of transcription of the human Alu family ubiquitous repeating element by eukaryotic RNA polymerase III.

  1981cited by this paper
• Transcriptional analysis of interspersed repetitive polymerase III transcription units in human DNA.

  1981cited by this paper
• Direct repeats flank three small nuclear RNA pseudogenes in the human genome.

  1981cited by this paper
• Structural analysis of templates and RNA polymerase III transcripts of Alu family sequences interspersed among the human beta-like globin genes.

  1981cited by this paper
• Selfish DNA: the ultimate parasite

  1980cited by this paper
• Selfish genes, the phenotype paradigm and genome evolution

  1980cited by this paper
• Partial nucleotide sequence of the 300-nucleotide interspersed repeated human DNA sequences

  1980cited by this paper
• Ubiquitous, interspersed repeated sequences in mammalian genomes.

  1980cited by this paper
• DNA sequencing with chain-terminating inhibitors.

  1977cited by this paper

• A Mechanism Leading to Changes in Copy Number Variations Affected by Transcriptional Level Might Be Involved in Evolution, Embryonic Development, Senescence, and Oncogenesis Mediated by Retrotransposons

  2021cites this paper
• 2 Alu Elements

  2019cites this paper
• Molecular and functional characterization of tumor‐induced factor (TIF): Hamster homolog of CXCL3 (GRO&ggr;) displays tumor suppressive activity

  2018cites this paper
• Methods of Inhibiting Alu RNA and Therapeutic Uses Thereof

  2017cites this paper
• U6 snRNA Pseudogenes: Markers of Retrotransposition Dynamics in Mammals

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• Identification of RNA polymerase III-transcribed Alu loci by computational screening of RNA-Seq data

  2014cites this paper
• On the Immortality of Television Sets: “Function” in the Human Genome According to the Evolution-Free Gospel of ENCODE

  2013cites this paper
• Caractérisation de l'expression des éléments Alu et du phénomène d'édition de l'ARN chez l'humain et la souris

  2012influential citation
• Regulation of RNA polymerase III transcription by DNA methylation and chromatin

  2012cites this paper
• Multiple Roles of Alu-Related Noncoding RNAs.

  2011influential citation
• DICER1 deficit induces Alu RNA toxicity in age-related macular degeneration

  2011cites this paper
• Laboratory methods for the analysis of primate mobile elements.

  2010cites this paper
• Diverse cis factors controlling Alu retrotransposition: what causes Alu elements to die?

  2009cites this paper
• Ancient repeat sequence derived from U6 snRNA in primate genomes.

  2009cites this paper
• Mammalian non-LTR retrotransposons: for better or worse, in sickness and in health.

  2008cites this paper
• Gene regulation by SINES and inosines: biological consequences of A-to-I editing of Alu element inverted repeats

  2008cites this paper
• SVA elements: hominid specific retrotransposons

  2006cites this paper
• An unusual primate locus that attracted two independent Alu insertions and facilitates their transcription.

  2005cites this paper
• Human retroelements may introduce intragenic polyadenylation signals

  2005cites this paper
• Alu retrotransposition-mediated genomic variation within the primate order

  2005cites this paper
• An analysis of human Alu element lineages

  2005cites this paper
• A comprehensive analysis of human Pre-Ta LINE-1 and Ya-lineage Alu mobile elements

  2005cites this paper
• Amplification dynamics of primate retrotransposons

  2005cites this paper
• Alu retrotransposition-mediated deletion.

  2005cites this paper
• The mammalian genome shaping activity of reverse transcriptase

  2005cites this paper
• Emergence of master sequences in families of retroposons derived from 7sl RNA

  2005cites this paper
• Evolution of B2 repeats: the muroid explosion

  2005cites this paper
• ALU-ring elements in the primate genomes

  2005cites this paper
• Evolution of B2 repeats: the muroid explosion

  2004cites this paper
• Flanking sequences of an Alu source stimulate transcription in vitro by interacting with sequence-specific transcription factors

  2004cites this paper
• Plant S1 SINEs as a model to study retroposition

  2004cites this paper
• Alu Elements and the Human Genome

  2004cites this paper
• Predicting mammalian SINE subfamily activity from A-tail length.

  2004cites this paper
• Evidence for a regulatory protein complex on RNA polymerase III promoter of human retroposons of Alu family

  2004cites this paper
• Identity by descent and DNA sequence variation of human SINE and LINE elements

  2004cites this paper
• Analysis of the human Alu Ya-lineage.

  2004cites this paper
• Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana.

  2004cites this paper
• Epigenetic studies of genomic retroelements in major psychosis.

  2004cites this paper
• Comprehensive analysis of Alu-associated diversity on the human sex chromosomes.

  2003cites this paper
• Potential for Retroposition by Old Alu Subfamilies

  2003cites this paper
• The unusual phylogenetic distribution of retrotransposons: a hypothesis.

  2003cites this paper
• Recently integrated Alu elements and human genomic diversity.

  2003cites this paper
• Mammalian retroelements.

  2002cites this paper
• Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity.

  2001cites this paper
• Differential stress induction of individual Alu loci: implications for transcription and retrotransposition.

  2001cites this paper
• A novel human DNA-binding protein with sequence similarity to a subfamily of redox proteins which is able to repress RNA-polymerase-III-driven transcription of the Alu-family retroposons in vitro.

  2001cites this paper
• Evolution of the MIR Elements Located in Coding Regions of Human Genome

  2001cites this paper
• Evolution of MIR Elements Located in the Coding Regions of Human Genome

  2001cites this paper
• Analysis of the SINE S1 Pol III promoter from Brassica; impact of methylation and influence of external sequences.

  2001cites this paper
• Cis-acting influences on Alu RNA levels.

  2000cites this paper
• K562 cells implicate increased chromatin accessibility in Alu transcriptional activation.

  2000cites this paper
• Beyond danger: unmethylated CpG dinucleotides and the immunopathogenesis of disease.

  2000cites this paper
• Evolutionary inventions and continuity of CORE-SINEs in mammals.

  2000cites this paper
• Potential gene conversion and source genes for recently integrated Alu elements.

  2000cites this paper
• An RNA polymerase III transcription unit located in the upstream control regions of the human proliferating-cell nucleolar protein p120 gene is transcribed in vitro and in vivo.

  1999cites this paper
• Physiological stresses increase mouse short interspersed element (SINE) RNA expression in vivo.

  1999cites this paper
• Alu repeats and human disease.

  1999cites this paper
• Control of genes by mammalian retroposons.

  1999cites this paper
• CORE-SINEs: eukaryotic short interspersed retroposing elements with common sequence motifs.

  1999cites this paper
• Phylogenetic affinities of tarsier in the context of primate Alu repeats.

  1999cites this paper
• Does SINE evolution preclude Alu function?

  1998cites this paper
• Fetal origins of the TEL-AML1 fusion gene in identical twins with leukemia.

  1998cites this paper
• Monophyletic Origin of Alu Elements in Primates

  1998cites this paper
• Regulation of RNA Polymerase III Transcription

  1998cites this paper
• Gene expression in human preimplantation embryos.

  1998cites this paper
• Potential Alu Function: Regulation of the Activity of Double-Stranded RNA-Activated Kinase PKR

  1998cites this paper
• Kinase PKR Activity of Double-Stranded RNA-Activated Potential Alu Function : Regulation of the

  1997cites this paper
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  1997cites this paper
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  1997cites this paper
• The decline in human Alu retroposition was accompanied by an asymmetric decrease in SRP9/14 binding to dimeric Alu RNA and increased expression of small cytoplasmic Alu RNA

  1997cites this paper
• Evolution and Impact of Transposable Elements

  1997cites this paper
• SINEs and LINEs share common 3' sequences: a review.

  1997cites this paper
• A newly isolated family of short interspersed repetitive elements (SINEs) in coregonid fishes (whitefish) with sequences that are almost identical to those of the SmaI family of repeats: possible evidence for the horizontal transfer of SINEs.

  1997cites this paper
• Alu sequences

  1997cites this paper
• cDNAs derived from primary and small cytoplasmic Alu (scAlu) transcripts.

  1997influential citation
• cDNA libraries from single human preimplantation embryos.

  1997cites this paper
• Isolation from a multigene family of the active human gene of the metastasis-associated multifunctional protein 37LRP/p40 at chromosome 3p21.3.

  1996cites this paper
• Characterization of species-specifically amplified SINEs in three salmonid species—Chum salmon, pink salmon, and kokanee: The local environment of the genome may be important for the generation of a dominant source gene at a newly retroposed locus

  1996cites this paper
• A Naturally Occurring TA Tract Blocks Nucleosome Formation Over the Human Neurofibromatosis Type 1 (NF1)-Alu Element (*)

  1996cites this paper
• Alu: structure, origin, evolution, significance and function of one-tenth of human DNA.

  1996cites this paper
• Monomeric scAlu and nascent dimeric Alu RNAs induced by adenovirus are assembled into SRP9/14-containing RNPs in HeLa cells.

  1996cites this paper
• A transcriptional analysis of the S1Bn (Brassica napus) family of SINE retroposons

  1996cites this paper
• The SRP9/14 subunit of the signal recognition particle (SRP) is present in more than 20-fold excess over SRP in primate cells and exists primarily free but also in complex with small cytoplasmic Alu RNAs.

  1995cites this paper
• A trinucleotide repeat-associated increase in the level of Alu RNA-binding protein occurred during the same period as the major Alu amplification that accompanied anthropoid evolution

  1995cites this paper
• Activation of expression of multiple subfamilies of human Alu elements by adenovirus type 5 and herpes simplex virus type 1.

  1995cites this paper
• Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts.

  1995cites this paper
• Two gene duplication events in the human and primate dopamine D5 receptor gene family.

  1995cites this paper
• RNA polymerase III promoter and terminator elements affect Alu RNA expression.

  1995cites this paper
• Transcription and processing of the rodent ID repeat family in germline and somatic cells.

  1995cites this paper
• An analysis of retroposition in plants based on a family of SINEs from Brassica napus

  1994cites this paper
• Amplification of distinct subfamilies of short interspersed elements during evolution of the Salmonidae.

  1994cites this paper
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  1994cites this paper
• A HumanAluRNA-Binding Protein WhoseExpression Is Associated withAccumulation ofSmallCytoplasmic AluRNA

  1994cites this paper
• Alu transcripts: cytoplasmic localisation and regulation by DNA methylation.

  1994cites this paper
• Evolution of secondary structure in the family of 7SL-like RNAs

  1994cites this paper
• A human Alu RNA-binding protein whose expression is associated with accumulation of small cytoplasmic Alu RNA

  1994cites this paper
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  1994cites this paper
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  1993cites this paper
• Proposed roles for DNA methylation in Alu transcriptional repression and mutational inactivation.

  1993cites this paper
• Evolution of Retroposons

  1993cites this paper