Transcriptional, Metabolic, Physiological and Developmental Responses to Nitrogen Limitation in Switchgrass (Panicum virgatum)

No abstract is available for this paper.

• Publication year

  2024

• Venue

  Environmental and Experimental Botany

• Publication date

  2024-04-01

• Fields of study

  Not labeled

• Identifiers
  DOI 10.1016/j.envexpbot.2024.105770
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• An Integrated Analysis of Metabolome, Transcriptome, and Physiology Revealed the Molecular and Physiological Response of Citrus sinensis Roots to Prolonged Nitrogen Deficiency

  2023cited by this paper
• Integration of physiology, metabolome and transcriptome for understanding of the adaptive strategies to long-term nitrogen deficiency in Citrus sinensis leaves

  2023cited by this paper
• Reimport of carbon from cytosolic and vacuolar sugar pools into the Calvin–Benson cycle explains photosynthesis labeling anomalies

  2022cited by this paper
• Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses

  2022cited by this paper
• A generalist–specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range

  2022cited by this paper
• Adaptive responses of carbon and nitrogen metabolisms to nitrogen-deficiency in Citrus sinensis seedlings

  2022cited by this paper
• Global gene expression profiling under nitrogen stress identifies key genes involved in nitrogen stress adaptation in maize (Zea mays L.)

  2022cited by this paper
• The Genetic Architecture of Nitrogen Use Efficiency in Switchgrass (Panicum virgatum L.)

  2022cited by this paper
• Transcriptome Analysis of Two Near-Isogenic Lines with Different NUE under Normal Nitrogen Conditions in Wheat

  2021cited by this paper
• RNA-Seq, physiological, and biochemical analysis of burley tobacco response to nitrogen deficiency

  2021cited by this paper
• Pentose Phosphate Pathway Reactions in Photosynthesizing Cells

  2021cited by this paper
• The entry reaction of the plant shikimate pathway is subjected to highly complex metabolite-mediated regulation.

  2021cited by this paper
• Cyanogenic glycosides can function as nitrogen reservoir for flax plants cultured under N-deficient conditions

  2021cited by this paper
• Nitrogen availability and allocation in sorghum and its wild relatives: Divergent roles for cyanogenic glucosides.

  2021cited by this paper
• Interactions among rooting traits for deep water and nitrogen uptake in upland and lowland ecotypes of switchgrass (Panicum virgatum L.)

  2021cited by this paper
• Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

  2021cited by this paper
• The versatile GABA in plants

  2021cited by this paper
• Nitrogen assimilation in plants: current status and future prospects.

  2021cited by this paper
• The pentose phosphate pathway and organization of metabolic networks enabling growth programs

  2021cited by this paper
• Growth, Mineral Nutrients, Photosynthesis and Related Physiological Parameters of Citrus in Response to Nitrogen Deficiency

  2021cited by this paper
• Exogenous GABA promotes adaptation and growth by altering the carbon and nitrogen metabolic flux in poplar seedlings under low nitrogen conditions.

  2020cited by this paper
• Transcriptome analysis of potato shoots, roots and stolons under nitrogen stress

  2020cited by this paper
• Variation in Root and Shoot Growth in Response to Reduced Nitrogen

  2020cited by this paper
• Plant nitrogen uptake and assimilation: regulation of cellular pH homeostasis

  2020cited by this paper
• Evaluation of seed nitrate assimilation and stimulation of phenolic-linked antioxidant on pentose phosphate pathway and nitrate reduction in three feed-plant species

  2020cited by this paper
• De novo transcriptome in roots of switchgrass (Panicum virgatum L.) reveals gene expression dynamic and act network under alkaline salt stress

  2020cited by this paper
• Comparative transcriptome study of switchgrass (Panicum virgatum L.) homologous autopolyploid and its parental amphidiploid responding to consistent drought stress

  2020cited by this paper
• Transcription strategies related to photosynthesis and nitrogen metabolism of wheat in response to nitrogen deficiency

  2020cited by this paper
• Transcriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitation

  2020cited by this paper
• Ammonium nutrition inhibits plant growth and nitrogen uptake in citrus seedlings

  2020cited by this paper
• Shikimic Acid Pathway in Biosynthesis of Phenolic Compounds

  2019cited by this paper
• Impacts of nitrogen fertilization rate and landscape position on select soil properties in switchgrass field at four sites in the USA

  2019cited by this paper
• An Integrated Analysis of the Rice Transcriptome and Metabolome Reveals Differential Regulation of Carbon and Nitrogen Metabolism in Response to Nitrogen Availability

  2019cited by this paper
• Influences of nitrogen fertilization and climate regime on the above-ground biomass yields of miscanthus and switchgrass: A meta-analysis

  2019cited by this paper
• Morphological and Transcriptome Analysis of Wheat Seedlings Response to Low Nitrogen Stress

  2019cited by this paper
• Analysis of main metabolisms during nitrogen deficiency and compensation in rice

  2019cited by this paper
• An Overview of Sucrose Synthases in Plants

  2019cited by this paper
• Switchgrass Rhizosphere Metabolite Chemistry Driven by Nitrogen Availability

  2019cited by this paper
• The effects of GABA in plants

  2019cited by this paper
• Transcriptome divergence during leaf development in two contrasting switchgrass (Panicum virgatum L.) cultivars

  2019cited by this paper
• Comparative transcriptome analysis provides key insights into seedling development in switchgrass (Panicum virgatum L.)

  2019cited by this paper
• Evolutionary Diversification of Primary Metabolism and Its Contribution to Plant Chemical Diversity

  2019cited by this paper
• Comparative metabolite profiling of two switchgrass ecotypes reveals differences in drought stress responses and rhizosheath weight

  2019cited by this paper
• Impacts of Nitrogen Rate and Landscape Position on Soils and Switchgrass Root Growth Parameters

  2019cited by this paper
• Analysis of Gene Regulatory Networks of Maize in Response to Nitrogen

  2018cited by this paper
• Do Galactolipid Synthases Play a Key Role in the Biogenesis of Chloroplast Membranes of Higher Plants?

  2018cited by this paper
• Nitrogen supply influences photosynthesis establishment along the sugarcane leaf

  2018cited by this paper
• Transcriptomic analyses of rice (Oryza sativa) genes and non-coding RNAs under nitrogen starvation using multiple omics technologies

  2018cited by this paper
• Early molecular events associated with nitrogen deficiency in rice seedling roots

  2018cited by this paper
• Transcriptome and Co-Expression Network Analyses Identify Key Genes Regulating Nitrogen Use Efficiency in Brassica juncea L.

  2018cited by this paper
• Biochemical and genetic analyses of N metabolism in maize testcross seedlings: 1. Leaves

  2017cited by this paper
• Transcriptome and metabolite analysis identifies nitrogen utilization genes in tea plant (Camellia sinensis)

  2017cited by this paper
• Transcriptomic response of durum wheat to nitrogen starvation

  2017cited by this paper
• A RNA-Seq Analysis of the Response of Photosynthetic System to Low Nitrogen Supply in Maize Leaf

  2017cited by this paper
• Effects of nitrogen-deficiency on efficiency of light-harvesting apparatus in radish.

  2017cited by this paper
• Soil Carbon and Nitrogen Responses to Nitrogen Fertilizer and Harvesting Rates in Switchgrass Cropping Systems

  2017cited by this paper
• Root biomass, root/shoot ratio, and soil water content under perennial grasses with different nitrogen rates

  2017cited by this paper
• Estimating root: shoot ratio and soil carbon inputs in temperate grasslands with the RothC model

  2016cited by this paper
• Nitrogen-Deficiency Stress Induces Protein Expression Differentially in Low-N Tolerant and Low-N Sensitive Maize Genotypes

  2016cited by this paper
• Transcriptome profiling analysis for two Tibetan wild barley genotypes in responses to low nitrogen

  2016cited by this paper
• Nitrogen remobilization and conservation, and underlying senescence‐associated gene expression in the perennial switchgrass Panicum virgatum

  2016cited by this paper
• PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

  2016cited by this paper
• Uncertainty budgeting in fold change determination and implications for non-targeted metabolomics studies in model systems.

  2016cited by this paper
• Comparative transcriptome profiling of upland (VS16) and lowland (AP13) ecotypes of switchgrass

  2016cited by this paper
• Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture

  2016cited by this paper
• Genome-wide identification and characterization of novel lncRNAs in Populus under nitrogen deficiency

  2016cited by this paper
• Comparative cell-specific transcriptomics reveals differentiation of C4 photosynthesis pathways in switchgrass and other C4 lineages

  2016cited by this paper
• The Differences between NAD-ME and NADP-ME Subtypes of C4 Photosynthesis: More than Decarboxylating Enzymes

  2016cited by this paper
• StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

  2015cited by this paper
• Transcriptome Profiling of Rust Resistance in Switchgrass Using RNA‐Seq Analysis

  2015cited by this paper
• Nitrate Starvation Induced Changes in Root System Architecture, Carbon:Nitrogen Metabolism, and miRNA Expression in Nitrogen-Responsive Wheat Genotypes

  2015cited by this paper
• Overcoming ammonium toxicity.

  2015cited by this paper
• HISAT: a fast spliced aligner with low memory requirements

  2015cited by this paper
• MS-DIAL: Data Independent MS/MS Deconvolution for Comprehensive Metabolome Analysis

  2015cited by this paper
• RNA-Seq-based transcriptome profiling of early nitrogen deficiency response in cucumber seedlings provides new insight into the putative nitrogen regulatory network.

  2015cited by this paper
• Transcriptome analysis of nitrogen-starvation-responsive genes in rice

  2015cited by this paper
• A recycling pathway for cyanogenic glycosides evidenced by the comparative metabolic profiling in three cyanogenic plant species.

  2015cited by this paper
• Seasonal Changes in Shoot and Root Nitrogen Distribution in Switchgrass (Panicum virgatum)

  2014cited by this paper
• Effect of different levels of nitrogen deficiency on switchgrass seedling growth

  2014cited by this paper
• Integrating transcriptional, metabolomic, and physiological responses to drought stress and recovery in switchgrass (Panicum virgatum L.)

  2014cited by this paper
• Lipid changes after leaf wounding in Arabidopsis thaliana: expanded lipidomic data form the basis for lipid co-occurrence analysis.

  2014cited by this paper
• Cyanogenic glycosides: synthesis, physiology, and phenotypic plasticity.

  2014cited by this paper
• Sucrose metabolism: gateway to diverse carbon use and sugar signaling.

  2014cited by this paper
• Switchgrass (Panicum virgatum L) flag leaf transcriptomes reveal molecular signatures of leaf development, senescence, and mineral dynamics

  2014cited by this paper
• Switchgrass Response to Nitrogen Fertilizer Across Diverse Environments in the USA: a Regional Feedstock Partnership Report

  2014cited by this paper
• MRMPROBS suite for metabolomics using large-scale MRM assays

  2014cited by this paper
• Grain Yield, Forage Yield, and Nutritive Value of Dual-Purpose Small Grains in the Central High Plains of the USA

  2013cited by this paper
• Transcriptome analysis of heat stress response in switchgrass (Panicum virgatum L.)

  2013cited by this paper
• Expression analysis of stress responsive pathway genes linked to drought hardiness in an adapted crop, finger millet (Eleusine coracana)

  2013cited by this paper
• Effects of the inhibitor of the γ-aminobutyrate-transaminase, vinyl-γ-aminobutyrate, on development and nitrogen metabolism in Brassica napus seedlings.

  2013cited by this paper
• Differential changes in galactolipid and phospholipid species in soybean leaves and roots under nitrogen deficiency and after nodulation.

  2013cited by this paper
• Short-term response in leaf metabolism of perennial ryegrass (Lolium perenne) to alterations in nitrogen supply

  2013cited by this paper
• Characterization of a NADH-Dependent Glutamate Dehydrogenase Mutant of Arabidopsis Demonstrates the Key Role of this Enzyme in Root Carbon and Nitrogen Metabolism[W]

  2012cited by this paper
• Switchgrass Yield Response Functions and Profit‐Maximizing Nitrogen Rates on Four Landscapes in Tennessee

  2012cited by this paper
• The shikimate pathway and aromatic amino Acid biosynthesis in plants.

  2012cited by this paper
• Evolution and functional properties of photosystem II light harvesting complexes in eukaryotes.

  2012cited by this paper
• A simplified protocol for genetic transformation of switchgrass (Panicum virgatum L.)

  2012cited by this paper
• Differential analysis of gene regulation at transcript resolution with RNA-seq

  2012cited by this paper
• The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize.

  2012cited by this paper
• Exploring the Switchgrass Transcriptome Using Second-Generation Sequencing Technology

  2012cited by this paper

• Enhanced Nitrogen Use Efficiency and Reshaped Phyllosphere Microbiome through Biochar Application and Nitrogen Fertilizer Reduction.

  2026cites this paper
• Response of dauciform roots to low phosphorus stress: Insights based on ecophysiology, transcriptomics, and metabolomics analysis

  2025cites this paper
• Molecular evolutionary analysis and expression patterns of nitrogen assimilation-related gene families in Lycium ruthenicum under salt stress

  2025cites this paper
• Upland switchgrass enhances phytoremediation and promotes carbon sequestration in cadmium-contaminated soils

  2025cites this paper