CLAE: A High‐Fidelity Nanopore Sequencing Strategy for Read‐Level Viral Variant Detection and Environmental RNA Virus Discovery

H. Yu,Sarah Golconda,Ga-Eun Lee,Dantong Xue,Guillermo Domínguez-Huerta,James M. Wainaina,Ben Bolduc,S. Murthy,Shi-Yeon Kim,Seth Faith,Shan-Lu Liu,Jiyoung Lee,Michael Oglesbee,Matthew B. Sullivan,Sanggu Kim

Published 2025 in Advancement of science

ABSTRACT

High‐fidelity (HF) long‐read sequencing enables accurate profiling of microorganisms and pathogens at single‐molecule resolution. However, current Oxford Nanopore Technologies (ONT)—a revolutionary platform offering real‐time, portable sequencing at relatively low instrumental cost—suffer from severe read‐length bias, limited accuracy (often

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