Editing of Mitochondrial Transcripts nad3 and cox2 by Dek10 Is Essential for Mitochondrial Function and Maize Plant Development

No abstract is available for this paper.

• Publication year

  2017

• Venue

  Genetics

• Publication date

  2017-02-17

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1534/genetics.116.199331PMID 28213476PMCID PMC5378108
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Title : Editing of mitochondrial transcripts nad 3 and cox 2 by Dek 10 is 1 essential for mitochondrial function and maize plant development

  2017cited by this paper
• EMPTY PERICARP16 is required for mitochondrial nad2 intron 4 cis-splicing, complex I assembly and seed development in maize.

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  2015cited by this paper
• Empty pericarp7 encodes a mitochondrial E-subgroup pentatricopeptide repeat protein that is required for ccmFN editing, mitochondrial function and seed development in maize.

  2015influential reference
• PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana

  2015cited by this paper
• The impact of the HIRA histone chaperone upon global nucleosome architecture

  2015cited by this paper
• Maize reas1 Mutant Stimulates Ribosome Use Efficiency and Triggers Distinct Transcriptional and Translational Responses1[OPEN]

  2015influential reference
• Disruption of the CYTOCHROME C OXIDASE DEFICIENT1 Gene Leads to Cytochrome c Oxidase Depletion and Reorchestrated Respiratory Metabolism in Arabidopsis1[C][W]

  2014cited by this paper
• Transfer cells

  2014cited by this paper
• Surrogate mutants for studying mitochondrially encoded functions.

  2014cited by this paper
• Small kernel 1 encodes a pentatricopeptide repeat protein required for mitochondrial nad7 transcript editing and seed development in maize (Zea mays) and rice (Oryza sativa).

  2014influential reference
• Identification and Characterization of Maize floury4 as a Novel Semidominant Opaque Mutant That Disrupts Protein Body Assembly1[W][OPEN]

  2014cited by this paper
• RNA metabolism in plant mitochondria.

  2014influential reference
• Pentatricopeptide repeat proteins in plants.

  2014cited by this paper
• Empty Pericarp5 Encodes a Pentatricopeptide Repeat Protein That Is Required for Mitochondrial RNA Editing and Seed Development in Maize[W]

  2013influential reference
• Systematic study of subcellular localization of Arabidopsis PPR proteins confirms a massive targeting to organelles

  2013cited by this paper
• Improved Computational Target Site Prediction for Pentatricopeptide Repeat RNA Editing Factors

  2013cited by this paper
• PPR-SMRs

  2013influential reference
• Plant mitochondrial genome peculiarities evolving in the earliest vascular plant lineages

  2013cited by this paper
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  2012cited by this paper
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  2012cited by this paper
• Functional disruption of the pentatricopeptide protein SLG1 affects mitochondrial RNA editing, plant development, and responses to abiotic stresses in Arabidopsis.

  2012cited by this paper
• solation of Arabidopsis ahg 11 , a weak ABA hypersensitive u ant defective in nad 4 RNA editing

  2012cited by this paper
• PPR2263, a DYW-Subgroup Pentatricopeptide Repeat Protein, Is Required for Mitochondrial nad5 and cob Transcript Editing, Mitochondrion Biogenesis, and Maize Growth[C][W]

  2012influential reference
• SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism.

  2012cited by this paper
• The Pentatricopeptide Repeat Protein OTP87 Is Essential for RNA Editing of nad7 and atp1 Transcripts in Arabidopsis Mitochondria*

  2011cited by this paper
• The evolution of RNA editing and pentatricopeptide repeat genes.

  2011cited by this paper
• Opaque7 Encodes an Acyl-Activating Enzyme-Like Protein That Affects Storage Protein Synthesis in Maize Endosperm

  2011cited by this paper
• Targeted gene disruption identifies three PPR-DYW proteins involved in RNA editing for five editing sites of the moss mitochondrial transcripts.

  2010cited by this paper
• MEF 9 , an E-Subclass Pentatricopeptide Repeat Protein , Is Required for an RNA Editing Event in the nad 7 Transcript in Mitochondria of Arabidopsis 1 [ C ] [ OA ]

  2010cited by this paper
• The involvement of a PPR protein of the P subfamily in partial RNA editing of an Arabidopsis mitochondrial transcript.

  2010cited by this paper
• Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.

  2009cited by this paper
• MEF9, an E-Subclass Pentatricopeptide Repeat Protein, Is Required for an RNA Editing Event in the nad7 Transcript in Mitochondria of Arabidopsis1[C][OA]

  2009cited by this paper
• A DYW Domain–Containing Pentatricopeptide Repeat Protein Is Required for RNA Editing at Multiple Sites in Mitochondria of Arabidopsis thaliana[W]

  2009cited by this paper
• Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

  2009cited by this paper
• Searching for SNPs with cloud computing

  2009cited by this paper
• Remodeled Respiration in ndufs4 with Low Phosphorylation Efficiency Suppresses Arabidopsis Germination and Growth and Alters Control of Metabolism at Night1[W][OA]

  2009cited by this paper
• Pentatricopeptide repeat proteins: a socket set for organelle gene expression.

  2008cited by this paper
• The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana.

  2008cited by this paper
• Arabidopsis PPR40 Connects Abiotic Stress Responses to Mitochondrial Electron Transport1[W][OA]

  2008cited by this paper
• Combined networks regulating seed maturation.

  2007cited by this paper
• The Mitochondrion: An Integration Point of Cellular Metabolism and Signalling

  2007cited by this paper
• A multicolored set of in vivo organelle markers for co-localization studies in Arabidopsis and other plants.

  2007cited by this paper
• The mitochondrial compartment.

  2006cited by this paper
• Respiratory chain supercomplexes in the plant mitochondrial membrane.

  2006cited by this paper
• THE DEVELOPMENT AND IMPORTANCE OF ZEIN PROTEIN BODIES IN MAIZE ENDOSPERM

  2006cited by this paper
• Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis

  2004influential reference
• Transfer cells: cells specialized for a special purpose.

  2003cited by this paper
• Agrobacterium tumefaciens-Mediated Transformation of Maize Embryos Using a Standard Binary Vector System1

  2002cited by this paper
• The maize dek1 gene functions in embryonic pattern formation and cell fate specification.

  2002cited by this paper
• The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily

  2002cited by this paper
• Alternative Oxidase: Integrating Carbon Metabolism and Electron Transport in Plant Respiration

  2002cited by this paper
• Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

  2001cited by this paper
• Development and functions of seed transfer cells.

  2001cited by this paper
• Endosperm development in Zea mays; implication of gametic imprinting and paternal excess in regulation of transfer layer development

  1995cited by this paper
• Mitochondrial Electron Transport Regulation of Nuclear Gene Expression (Studies with the Alternative Oxidase Gene of Tobacco)

  1994cited by this paper
• Effect of thefloury-2 locus on protein body formation during maize endosperm development

  1992influential reference
• Defective kernel mutants of maize. I. Genetic and lethality studies.

  1980cited by this paper
• Effect of the De(17) Allele on Development of the Maize Caryopsis.

  1947cited by this paper
• Rothamsted Repository Download

  year unknowninfluential reference

• Maize EMP14 is required for mitochondrial RNA editing and intron splicing

  2026cites this paper
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  2025cites this paper
• Proteogenomic Gene Structure Validation in the Pineapple Genome

  2024cites this paper
• DEFECTIVE KERNEL 56 functions in mitochondrial RNA editing and maize seed development.

  2023cites this paper
• Molecular mechanisms controlling grain size and weight and their biotechnological breeding applications in maize and other cereal crops

  2023cites this paper
• Beyond parasitic convergence: unraveling the evolution of the organellar genomes in holoparasites.

  2023cites this paper
• Identification of candidate gene for the defective kernel phenotype using bulked segregant RNA and exome capture sequencing methods in wheat

  2023cites this paper
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  2022cites this paper
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  2022cites this paper
• Cytonuclear coevolution in a holoparasitic plant with highly disparate organellar genomes

  2022cites this paper
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  2022cites this paper
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  2022cites this paper
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  2022cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2020cites this paper
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  2020cites this paper
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  2020cites this paper
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  2019cites this paper
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