The D-allose operon of Escherichia coli K-12

No abstract is available for this paper.

• Publication year

  1997

• Venue

  Journal of Bacteriology

• Publication date

  1997-12-01

• Fields of study

  Biology, Medicine, Chemistry

• Identifiers
  DOI 10.1128/jb.179.24.7631-7637.1997PMID 9401019PMCID PMC179723
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  1984cited by this paper
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  1984cited by this paper
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  1981cited by this paper
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  1976cited by this paper
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