Genomic evidence for ecological divergence against a background of population homogeneity in the marine snail Chlorostoma funebralis

No abstract is available for this paper.

• Publication year

  2016

• Venue

  Molecular Ecology

• Publication date

  2016-08-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1111/mec.13703PMID 27199218
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Handbook of Culture of Abalone and Other Marine Gastropods

  2021cited by this paper
• Shared and nonshared genomic divergence in parallel ecotypes of Littorina saxatilis at a local scale

  2016cited by this paper
• Genetic evidence for ecological divergence in kokanee salmon

  2015cited by this paper
• RNA‐seq reveals regional differences in transcriptome response to heat stress in the marine snail Chlorostoma funebralis

  2015influential reference
• The environmental genomics of metazoan thermal adaptation

  2015influential reference
• Genomic atolls of differentiation in coral reef fishes (Hypoplectrus spp., Serranidae)

  2014influential reference
• RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

  2014cited by this paper
• New PARP targets for cancer therapy

  2014cited by this paper
• Human DExD/H RNA helicases: emerging roles in stress survival regulation.

  2014cited by this paper
• Development and application of genomic tools to the restoration of green abalone in southern California

  2014influential reference
• Amplification Biases and Consistent Recovery of Loci in a Double-Digest RAD-seq Protocol

  2014influential reference
• Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis populations?

  2014cited by this paper
• Phylogenomic analyses reveal latitudinal population structure and polymorphisms in heat stress genes in the North Atlantic snail Nucella lapillus

  2014cited by this paper
• Cryptic diversity hides host and habitat specialization in a gorgonian‐algal symbiosis

  2014cited by this paper
• Phenotypic evidence for local adaptation to heat stress in the marine snail Chlorostoma (formerly Tegula) funebralis

  2013influential reference
• Going where traditional markers have not gone before: utility of and promise for RAD sequencing in marine invertebrate phylogeography and population genomics

  2013cited by this paper
• Transcriptome‐wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation

  2013influential reference
• Population genomics of Pacific lamprey: adaptive variation in a highly dispersive species

  2013cited by this paper
• Stacks: an analysis tool set for population genomics

  2013influential reference
• Novel genomic resources for a climate change sensitive mammal: characterization of the American pika transcriptome

  2013cited by this paper
• Caenorhabditis elegans HSF‐1 is an essential nuclear protein that forms stress granule‐like structures following heat shock

  2013cited by this paper
• SNP Detection from De Novo Transcriptome Sequencing in the Bivalve Macoma balthica: Marker Development for Evolutionary Studies

  2012cited by this paper
• The interplay between habitat availability and population differentiation

  2012cited by this paper
• Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

  2012cited by this paper
• Stress Granules Inhibit Apoptosis by Reducing Reactive Oxygen Species Production

  2012cited by this paper
• STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

  2012influential reference
• CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomics

  2012influential reference
• Genome-wide polymorphisms show unexpected targets of natural selection

  2012cited by this paper
• A simulation study on the performance of differentiation‐based methods to detect selected loci using linked neutral markers

  2012cited by this paper
• Transient sequestration of TORC1 into stress granules during heat stress.

  2012cited by this paper
• Faculty Opinions recommendation of The EDD E3 ubiquitin ligase ubiquitinates and up-regulates beta-catenin.

  2011cited by this paper
• The coupling hypothesis: why genome scans may fail to map local adaptation genes

  2011cited by this paper
• Stacks: Building and Genotyping Loci De Novo From Short-Read Sequences

  2011influential reference
• The Role of Molecular Microtubule Motors and the Microtubule Cytoskeleton in Stress Granule Dynamics

  2011cited by this paper
• Gene Discovery in the Threatened Elkhorn Coral: 454 Sequencing of the Acropora palmata Transcriptome

  2011cited by this paper
• Detection of outlier loci and their utility for fisheries management

  2011cited by this paper
• Genome-wide genetic marker discovery and genotyping using next-generation sequencing

  2011cited by this paper
• Nucleotide divergence vs. gene expression differentiation: comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow

  2010cited by this paper
• Genetic Structure Among 50 Species of the Northeastern Pacific Rocky Intertidal Community

  2010influential reference
• Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

  2010cited by this paper
• Population biology and reproductive ecology of Chlorostoma (Tegula) funebralis, an intertidal gastropod

  2010cited by this paper
• Localization to, and Effects of Pbp1, Pbp4, Lsm12, Dhh1, and Pab1 on Stress Granules in Saccharomyces cerevisiae

  2010cited by this paper
• Phenotype-environment mismatches reduce connectivity in the sea.

  2010cited by this paper
• A method for detecting population genetic structure in diverse, high gene-flow species.

  2010influential reference
• Comparing three different methods to detect selective loci using dominant markers

  2010cited by this paper
• Eukaryotic stress granules: the ins and outs of translation.

  2009cited by this paper
• Robust heat shock induces eIF2α-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae

  2009cited by this paper
• Living without Oxygen: Anoxia-Responsive Gene Expression and Regulation

  2009cited by this paper
• Dynein and kinesin regulate stress-granule and P-body dynamics

  2009cited by this paper
• Metazoan stress granule assembly is mediated by P-eIF2alpha-dependent and -independent mechanisms.

  2009cited by this paper
• Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2α phosphorylation at Thr169

  2008cited by this paper
• Oxygen declines and the shoaling of the hypoxic boundary in the California Current

  2008cited by this paper
• ISA Channel Complexes Include Four Subunits Each of DPP6 and Kv4.2*

  2008cited by this paper
• The adaptive evolution of the mammalian mitochondrial genome

  2008cited by this paper
• genepop’007: a complete re‐implementation of the genepop software for Windows and Linux

  2008influential reference
• A rapid bootstrap algorithm for the RAxML Web servers.

  2008cited by this paper
• Formation of stress granules inhibits apoptosis by suppressing stress-responsive MAPK pathways

  2008cited by this paper
• LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

  2008cited by this paper
• Comparison of developmental trajectories in the starlet sea anemone Nematostella vectensis: embryogenesis, regeneration, and two forms of asexual fission

  2007cited by this paper
• The deacetylase HDAC6 is a novel critical component of stress granules involved in the stress response.

  2007cited by this paper
• CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

  2007cited by this paper
• INCREASED SIZE EXCLUSION LIMIT2 Encodes a Putative DEVH Box RNA Helicase Involved in Plasmodesmata Function during Arabidopsis Embryogenesis[W]

  2007cited by this paper
• Inference of population structure using multilocus genotype data: dominant markers and null alleles

  2007influential reference
• Mammalian stress granules and processing bodies.

  2007cited by this paper
• MOSAIC PATTERNS OF THERMAL STRESS IN THE ROCKY INTERTIDAL ZONE: IMPLICATIONS FOR CLIMATE CHANGE

  2006cited by this paper
• Annotation: the analysis of variance and the analysis of causes.

  2006cited by this paper
• Recent progress in understanding larval dispersal: new directions and digressions.

  2006cited by this paper
• OrfPredictor: predicting protein-coding regions in EST-derived sequences

  2005cited by this paper
• Genomic Islands of Speciation in Anopheles gambiae

  2005cited by this paper
• Detecting the number of clusters of individuals using the software structure: a simulation study

  2005influential reference
• Sequestration of TRAF2 into Stress Granules Interrupts Tumor Necrosis Factor Signaling under Stress Conditions

  2005cited by this paper
• FAST‐TRACK: Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis)

  2004cited by this paper
• A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.

  2003influential reference
• Disruption of microtubules inhibits cytoplasmic ribonucleoprotein stress granule formation.

  2003cited by this paper
• Evolutionary and ecological functional genomics

  2003cited by this paper
• IBD (Isolation by Distance): a program for analyses of isolation by distance.

  2002influential reference
• Gene flow and the limits to natural selection

  2002cited by this paper
• Stressful initiations.

  2002cited by this paper
• Impact of mutations affecting ND mitochondria-encoded subunits on the activity and assembly of complex I in Chlamydomonas. Implication for the structural organization of the enzyme.

  2002cited by this paper
• Geographical abundance distributions of coastal invertebrates: using one‐dimensional ranges to test biogeographic hypotheses

  2002cited by this paper
• Evidence that ternary complex (eIF2-GTP-tRNA(i)(Met))-deficient preinitiation complexes are core constituents of mammalian stress granules.

  2002cited by this paper
• Stress granules: sites of mRNA triage that regulate mRNA stability and translatability.

  2002cited by this paper
• Climate Change and Latitudinal Patterns of Intertidal Thermal Stress

  2002cited by this paper
• ADAPTIVE MAINTENANCE OF GENETIC POLYMORPHISM IN AN INTERTIDAL BARNACLE: HABITAT- AND LIFE-STAGE-SPECIFIC SURVIVORSHIP OF MPI GENOTYPES

  2001cited by this paper
• A likelihood approach to estimating phylogeny from discrete morphological character data.

  2001cited by this paper
• ADAPTIVE MAINTENANCE OF GENETIC POLYMORPHISM IN AN INTERTIDAL BARNACLE: HABITAT‐ AND LIFE‐STAGE‐SPECIFIC SURVIVORSHIP OF MPI GENOTYPES

  2001cited by this paper
• Inference of population structure using multilocus genotype data.

  2000cited by this paper
• Comparative population genetic structure of marine gastropods (Littorina spp.) with and without pelagic larval dispersal

  2000cited by this paper
• RNA-Binding Proteins Tia-1 and Tiar Link the Phosphorylation of Eif-2α to the Assembly of Mammalian Stress Granules

  1999cited by this paper
• INTERTIDAL MICROHABITAT AND SELECTION AT MPI: INTERLOCUS CONTRASTS IN THE NORTHERN ACORN BARNACLE, SEMIBALANUS BALANOIDES

  1999cited by this paper
• Spawning and larval development of the black turban snail Tegula funebralis (Prosobranchia: Trochidae)

  1997influential reference
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997influential reference
• Myocardial Ischemic Tolerance Following Heat Stress Is Abolished by ATP-Sensitive Potassium Channel Blockade

  1997cited by this paper
• AN EXACT TEST FOR POPULATION DIFFERENTIATION

  1995cited by this paper
• Analysis of population genetic structure with RAPD markers

  1994influential reference
• ISOLATION BY DISTANCE IN EQUILIBRIUM AND NON‐EQUILIBRIUM POPULATIONS

  1993cited by this paper
• Performing the exact test of Hardy-Weinberg proportion for multiple alleles.

  1992influential reference
• Activation of potassium channels: relationship to the heat shock response.

  1992cited by this paper
• Balancing selection at allozyme loci in oysters: implications from nuclear RFLPs.

  1992cited by this paper
• Cytoplasmic heat shock granules are formed from precursor particles and are associated with a specific set of mRNAs

  1989cited by this paper

• Rewilding shows differential fitness of sympatric Physella acuta (Draparnaud, 1805) snail lineages

  2025cites this paper
• Investigating Bacterial Contributions to Thermal Tolerance in Three Intertidal Marine Snail Tegula Species

  2025cites this paper
• Selection Over Small and Large Spatial Scales in the Face of High Gene Flow

  2025cites this paper
• A reference genome for the rough limpet Lottia scabra, an intertidal species from the northeastern Pacific.

  2025cites this paper
• Temperature moderates the scaling relationships of energy supply and demand with body size and helps explain the Temperature-Size Rule in a marine snail

  2025cites this paper
• Evolution of parasites in the Anthropocene: new pressures, new adaptive directions

  2024cites this paper
• Evaluation of population genetics of Acanthogobius ommaturus using genotyping by sequencing technology

  2023cites this paper
• Local adaptation with gene flow in a highly dispersive shark

  2023cites this paper
• UvA-DARE Genomic variability and population structure in shelled pteropods

  2022cites this paper
• Genomic investigations provide insights into the mechanisms of resilience to heterogeneous habitats of the Indian Ocean in a pelagic fish

  2021cites this paper
• Population genomics of the Eastern Rock Lobster, Sagmariasus verreauxi, during spawning stock recovery from over-exploitation

  2021cites this paper
• Neutral and adaptive population structure of pink abalone (Haliotis corrugata): fishery management implications

  2021cites this paper
• Identification of putative key genes for thermal adaptation in the Japanese mantis shrimp (Oratosquilla oratoria) through population genomic analysis.

  2021cites this paper
• A non-exhaustive survey revealed possible genetic similarity in mitochondrial adaptive evolution of marine fish species in the northwestern Pacific

  2020cites this paper
• Re-examination of population structure in Arctic ringed seals using DArTseq genotyping

  2020cites this paper
• OP-GBEV200151 1819..1829

  2020cites this paper
• Population Genomics: Marine Organisms

  2020cites this paper
• Growth Performance and Transcriptomic Response of Warm-Acclimated Hybrid Abalone Haliotis rufescens (♀) × H. corrugata (♂)

  2020cites this paper
• Using multiple natural tags provides evidence for extensive larval dispersal across space and through time in summer flounder

  2020cites this paper
• Gene flow in the anemone Anthopleura elegantissima limits signatures of local adaptation across an extensive geographic range

  2020cites this paper
• Population Genomic Analyses of the Sea Urchin Echinometra sp. EZ across an Extreme Environmental Gradient

  2020cites this paper
• Genotyping-by-sequencing to determine the genetic structure of a Tibetan medicinal plant Swertia mussotii Franch.

  2020cites this paper
• Growth Performance and Transcriptomic Response of Warm-Acclimated Hybrid Abalone Haliotis rufescens (♀) × H. corrugata (♂)

  2020cites this paper
• Oceanic dispersal barriers in a holoplanktonic gastropod

  2020cites this paper
• How “simple” methodological decisions affect interpretation of population structure based on reduced representation library DNA sequencing: A case study using the lake whitefish

  2020cites this paper
• Lineage Identification affects estimates of Evolutionary Mode in Marine Snails.

  2020cites this paper
• Thermal selection as a driver of marine ecological speciation

  2019cites this paper
• Population genetic structure and selective pressure on the mitochondrial ATP6 gene of the Japanese sand lance Ammodytes personatus Girard

  2019cites this paper
• Go with the flow

  2019cites this paper
• Population substructure and signals of divergent adaptive selection despite admixture in the sponge Dendrilla antarctica from shallow waters surrounding the Antarctic Peninsula

  2019cites this paper
• Seascape genomics reveals population isolation in the reef-building honeycomb worm, Sabellaria alveolata (L.)

  2019cites this paper
• Seascape Genomics: Contextualizing Adaptive and Neutral Genomic Variation in the Ocean Environment

  2019cites this paper
• Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi

  2018cites this paper
• Complex signatures of genomic variation of two non-model marine species in a homogeneous environment

  2018cites this paper
• Nonclonal coloniality: Genetically chimeric colonies through fusion of sexually produced polyps in the hydrozoan Ectopleura larynx

  2018cites this paper
• Finding stories in noise: Mitochondrial portraits from RAD data

  2018cites this paper
• Genomic signatures of environmental selection despite near‐panmixia in summer flounder

  2018cites this paper
• Contrasting phylogeographic pattern among Eudyptes penguins around the Southern Ocean

  2018cites this paper
• Go with the flow

  2018cites this paper
• Marine Invasion Genomics: Revealing Ecological and Evolutionary Consequences of Biological Invasions

  2018cites this paper
• Thermal selection drives biodiversity origination across the Atlantic/Indian Ocean boundary

  2018cites this paper
• Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi

  2018cites this paper
• Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America

  2018cites this paper
• Population Genomics Reveals Genetic Divergence and Adaptive Differentiation of Chinese Sea Bass (Lateolabrax maculatus)

  2017cites this paper
• Local adaptation shapes pattern of mitochondrial population structure in Sebastiscus marmoratus

  2017cites this paper
• Regional and local environmental conditions do not shape the response to warming of a marine habitat-forming species

  2017cites this paper
• Genomic evidence for local adaptation in the ovoviviparous marine fish Sebastiscus marmoratus with a background of population homogeneity

  2017cites this paper
• Go with the flow: patterns of connectivity in low dispersal coral reef gobies (Coryphopterus spp.) throughout the western Atlantic

  2017cites this paper
• Le défi évolutif du changement climatique, processus adaptatifs chez le corail rouge (Corallium rubrum)

  2016cites this paper
• Genome-Wide Divergence among Populations in Distinct Ocean Habitats of the Mesopelagic Copepod Pleuromamma xiphias

  2016cites this paper
• Regional patterns of thermal stress and constitutive gene expression in the marine snail Chlorostoma funebralis in northern and southern California

  2016influential citation
• Sex matters in Massive Parallel Sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems

  2016cites this paper
• Rewilding shows differential �tness of Physella acuta snail populations with different invasive potential

  year unknowncites this paper