The actinomycete Thermobispora bispora contains two distinct types of transcriptionally active 16S rRNA genes

No abstract is available for this paper.

• Publication year

  1997

• Venue

  Journal of Bacteriology

• Publication date

  1997-05-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1128/jb.179.10.3270-3276.1997PMID 9150223PMCID PMC179106
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Molecular Cloning: A Laboratory Manual

  2001influential reference
• A proposal to transfer Microbispora bispora (Lechevalier 1965) to a new genus, Thermobispora gen. nov., as Thermobispora bispora comb. nov.

  1996cited by this paper
• Evidence that two types of 18S rDNA coexist in the genome of Dugesia (Schmidtea) mediterranea (Platyhelminthes, Turbellaria, Tricladida).

  1996cited by this paper
• Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis

  1996cited by this paper
• A quantitative map of nucleotide substitution rates in bacterial rRNA.

  1996influential reference
• Optimization of Dnase I removal of contaminating DNA from RNA for use in quantitative RNA-PCR.

  1996cited by this paper
• Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

  1995cited by this paper
• Intraspecific variation in small-subunit rRNA sequences in GenBank: why single sequences may not adequately represent prokaryotic taxa.

  1995cited by this paper
• Computer assisted identification and classification of streptomycete promoters.

  1995cited by this paper
• Horizontal gene transfer: evidence and possible consequences.

  1994cited by this paper
• Molecular, functional, and evolutionary analysis of sequences specific to Salmonella.

  1993cited by this paper
• Horizontal transfer of a phosphatase gene as evidence for mosaic structure of the Salmonella genome.

  1992cited by this paper
• Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli.

  1992cited by this paper
• Sequence heterogeneity between the two genes encoding 16S rRNA from the halophilic archaebacterium Haloarcula marismortui.

  1992cited by this paper
• Ribosomal RNA and rDNA sequence analyses.

  1992cited by this paper
• Analysis of operons encoding 23S rRNA of Clostridium botulinum type A

  1992cited by this paper
• 16S/23S rRNA sequencing

  1991cited by this paper
• A comparative study of the ribosomal RNA operons of Streptomyces coelicolor A3(2) and sequence analysis of rrnA.

  1991cited by this paper
• Evidence for biased gene conversion in concerted evolution of ribosomal DNA.

  1991cited by this paper
• Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.

  1990cited by this paper
• Sequence heterogeneity in the duplicate large subunit ribosomal RNA genes of Tetrahymena pyriformis mitochondrial DNA.

  1990cited by this paper
• Developmental regulation of stage-specific ribosome populations in Plasmodium

  1989cited by this paper
• Isolation and characterization of the rRNA gene clusters of Halobacterium marismortui

  1989cited by this paper
• Structurally distinct, stage-specific ribosomes occur in Plasmodium.

  1987influential reference
• Bacterial evolution

  1987cited by this paper
• Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones.

  1987cited by this paper
• Nucleolytic processing of ribonucleic acid transcripts in procaryotes

  1986cited by this paper
• Nucleolytic processing of ribonucleic acid transcripts in procaryotes.

  1986influential reference
• The ribosomal genes of Plasmodium.

  1986cited by this paper
• Mechanism and control of transcription initiation in prokaryotes.

  1985cited by this paper
• Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.

  1985cited by this paper
• The primary structure of oocyte and somatic 5S rRNAs from the loach Misgurnus fossilis.

  1981cited by this paper
• Molecular evidence for genetic exchanges among ribosomal genes on nonhomologous chromosomes in man and apes.

  1980cited by this paper
• Repeated genes in eukaryotes.

  1980cited by this paper
• The nucleotide sequence of the initiation and termination sites for ribosomal RNA transcription in X. laevis.

  1979cited by this paper
• Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

  1978cited by this paper
• The molecular basis for length heterogeneity in ribosomal DNA from Xenopus laevis.

  1976cited by this paper
• Amplified ribosomal DNA from Xenopus laevis has heterogeneous spacer lengths.

  1974cited by this paper
• Sequence heterogeneity of 5 S RNA in Xenopus laevis

  1972cited by this paper

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  2023cites this paper
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  2023cites this paper
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  2023cites this paper
• A Short Review of Forensic Microbiology

  2022cites this paper
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• Forensic human identification using skin microbiome genetic signatures

  2020cites this paper
• Molecular Identification and Antimicrobial Potential of Streptomyces Species from Nepalese Soil

  2020cites this paper
• Divergent rRNAs as regulators of gene expression at the ribosome level

  2019cites this paper
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  2017cites this paper
• Statistical analysis of co-occurrence patterns in microbial presence-absence datasets

  2017cites this paper
• Nomenclature errors in public 16s rDNA gene databases : strategies to improve the accuracy of sequence annotations

  2017cites this paper
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  2017cites this paper
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  2017cites this paper
• Expansion of Microbial Forensics

  2016cites this paper
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  2016cites this paper
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  2016cites this paper
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  2016cites this paper
• The human gut microbiome, a taxonomic conundrum.

  2015cites this paper
• Isolation of a diphenylamine-degrading bacterium and characterization of its metabolic capacities, bioremediation and bioaugmentation potential

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  2015cites this paper
• Phylogeny and Functionality: Taxonomy as a Roadmap to Genes

  2014cites this paper
• Human identification through analysis of the salivary microbiome: proof of principle

  2014cites this paper
• Type material in the NCBI Taxonomy Database

  2014cites this paper
• The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses

  2013cites this paper
• Intragenomic Heterogeneity of 16S rRNA Genes Causes Overestimation of Prokaryotic Diversity

  2013cites this paper
• New strategies for the accurate identification and detection of plant pathogens

  2012cites this paper
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  2012cites this paper
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  2012cites this paper
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  2012cites this paper
• Improving the Usage of ribosomal RNA Gene in Microbiology and Microbial Ecology Importance of Standardization and Biocuration

  2012cites this paper
• Phylum XXVI. Actinobacteria phyl. nov.

  2012cites this paper
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  2011cites this paper
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  2011cites this paper
• Multilevel populations and the evolution of antibiotic resistance through horizontal gene transfer.

  2011cites this paper
• The Use of rRNA Gene Sequence Data in the Classification and Identification of Prokaryotes

  2011cites this paper
• Microbial phylogeny and diversity: small subunit ribosomal RNA sequence analysis and beyond.

  2011cites this paper
• Complete genome sequence of Thermobispora bispora type strain (R51 T )

  2010influential citation
• Diversity of 16S rRNA Genes within Individual Prokaryotic Genomes

  2010cites this paper
• Complete genome sequence of Thermobispora bispora type strain (R51T)

  2010influential citation
• Intragenomic heterogeneity of the 16S rRNA gene in strain UFO1 caused by a 100-bp insertion in helix 6.

  2010cites this paper
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  2010cites this paper
• Natural taxonomy in light of horizontal gene transfer

  2010cites this paper
• Horizontal Gene Transfer

  2009cites this paper
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  2008cites this paper
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  2008cites this paper
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  2008cites this paper
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  2008cites this paper
• Use of cultivation-dependent and -independent techniques to assess contamination of central venous catheters: a pilot study

  2008cites this paper
• Simultaneous presence of two different copies of the 16S rRNA gene in Bartonella henselae.

  2008cites this paper
• rrn DB : documenting the number of rRNA and tRNA genes in bacteria and archaea

  2008cites this paper
• ribosomal RNA genes fromPrevotella bryantii: Organization and heterogeneity

  2008cites this paper
• Microbial Reductive Dechlorination of Aroclor 1260 in Baltimore Harbor Sediment Microcosms Is Catalyzed by Three Phylotypes within the Phylum Chloroflexi

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• Polyphasic approach of bacterial classification — An overview of recent advances

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• Phytoplankton and bacterial assemblages in ballast water of U.S. military ships as a function of port of origin, voyage time, and ocean exchange practices

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• Diversity of the human gastrointestinal microbiota : novel perspectives from high throughput analyses

  2007cites this paper
• A real-time PCR assay for the rapid determination of 16S rRNA genotype in Vibrio vulnificus.

  2007cites this paper
• The role of dehalorespiring bacteria in the reductive dechlorination of polychlorinated biphenyls in Baltimore harbor sediment microcosms

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• Diversity of the human gastrointestinal tract microbiota revisited.

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• Diverse rhizobia that nodulate two species of Kummerowia in China

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• Direct evidence for redundant segmental replacement between multiple 18S rRNA genes in a single Prototheca strain.

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• Analysis of Multiple Differing Copies of the 16S rRNA Gene in Five Clinical Isolates and Three Type Strains of Nocardia Species and Implications for Species Assignment

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  2006cites this paper
• Profiling and monitoring of microbial populations by denaturing high-performance liquid chromatography.

  2005cites this paper
• Multiple Copies of the 16S rRNA Gene in Nocardia nova Isolates and Implications for Sequence-Based Identification Procedures

  2005cites this paper
• High-density DNA probe arrays for identification of staphylococci to the species level.

  2005cites this paper
• Rhizobial 16S rRNA and dnaK Genes: Mosaicism and the Uncertain Phylogenetic Placement of Rhizobium galegae

  2005cites this paper
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• Microorganism diversity: Strategy and action plan †

  2005cites this paper
• Divergence and Redundancy of 16S rRNA Sequences in Genomes with Multiple rrn Operons

  2004cites this paper
• Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in Apicomplexans.

  2004cites this paper
• Prokaryote diversity and taxonomy: current status and future challenges.

  2004influential citation
• Copy Number of Ribosomal Operons in Prokaryotes and Its Effect on Phylogenetic Analyses

  2004influential citation
• Microbial Phylogeny and Evolution: concepts and controversies.

  2004cites this paper
• The phylogenetic relationships of cyanobacteria inferred from 16S rRNA, gyrB, rpoC1 and rpoD1 gene sequences.

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  2003cites this paper
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