The footprints of gut microbial-mammalian co-metabolism.

No abstract is available for this paper.

• Publication year

  2011

• Venue

  Journal of Proteome Research

• Publication date

  2011-10-24

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1021/pr2007945PMID 21970572
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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• References

  2021cites this paper
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  2021cites this paper
• Characteristics of faecal bacterial flora and volatile fatty acids in Min pig, Landrace pig, and Yorkshire pig

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• TMAO promotes apoptosis and oxidative stress of pancreatic acinar cells by mediating IRE1α-XBP-1 pathway

  2021cites this paper
• Metabolomic-based clinical studies and murine models for acute pancreatitis disease: A review.

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• Association of Cesarean Delivery and Formula Supplementation with the Stool Metabolome of 6-Week-Old Infants

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• Fecal Metabolomics Reveals Products of Dysregulated Proteolysis and Altered Microbial Metabolism in Obesity-Related Osteoarthritis.

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  2021cites this paper
• Gut microbiota-related metabolome analysis based on chromatography-mass spectrometry

  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
• Rapid and simultaneous determination of histidine metabolism intermediates in human and mouse microbiota and biomatrices

  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
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  2021cites this paper
• Unravelling the potential of gut microbiota in sustaining brain health and their current prospective towards development of neurotherapeutics

  2021cites this paper
• NMN Maintains Intestinal Homeostasis by Regulating the Gut Microbiota

  2021cites this paper
• References

  2021cites this paper
• Role of the Intestinal Microbiome, Intestinal Barrier and Psychobiotics in Depression

  2021cites this paper
• Gut Microbiome and Metabolic response in Non-Alcoholic Fatty Liver Disease.

  2021cites this paper
• Microbial metabolites in nutrition and healthcare

  2021cites this paper
• The role of microbiota in the regulation of homeostasis in the human body during infection

  2020cites this paper
• Citrus polymethoxyflavones attenuate metabolic syndrome by regulating gut microbiome and amino acid metabolism

  2020cites this paper
• Gut Microbiota Is the Key to the Antidepressant Effect of Chaihu-Shu-Gan-San

  2020cites this paper
• Cytochrome P450 Metabolism Leads to Novel Biological Sterols and Other Steroids

  2020cites this paper
• Inbreeding Alters the Gut Microbiota of the Banna Minipig

  2020cites this paper
• Gut-Brain Axis and its Neuro-Psychiatric Effects: A Narrative Review

  2020cites this paper
• Tongue Coating Bacteria as a Potential Stable Biomarker for Gastric Cancer Independent of Lifestyle

  2020cites this paper
• Metabolomics analysis of plasma and adipose tissue samples from mice orally administered with polydextrose and correlations with cecal microbiota

  2020cites this paper
• Prebiotic Xylo-oligosaccharides Targeting Faecalibacterium prausnitzii Prevent High Fat Diet-induced Hepatic Steatosis in Rats

  2020cites this paper
• Postbiotic-Enabled Targeting of the Host-Microbiota-Pathogen Interface: Hints of Antibiotic Decline?

  2020cites this paper
• Gut-Brain Axis in the Early Postnatal Years of Life: A Developmental Perspective

  2020cites this paper
• Exposure to chemicals formed from natural processes is ubiquitous

  2020cites this paper
• How the AHR Became Important in Intestinal Homeostasis—A Diurnal FICZ/AHR/CYP1A1 Feedback Controls Both Immunity and Immunopathology

  2020cites this paper
• Antibiotic-Induced Changes in Microbiome-Related Metabolites and Bile Acids in Rat Plasma

  2020cites this paper
• Caloric Restriction Remodels Energy Metabolic Pathways of Gut Microbiota and Promotes Host Autophagy

  2020cites this paper
• Manipulation of the Gut Microbiome Alters Acetaminophen Biodisposition in Mice

  2020cites this paper