Genetic Dissection of Nutritional Copper Signaling in Chlamydomonas Distinguishes Regulatory and Target Genes

No abstract is available for this paper.

• Publication year

  2004

• Venue

  Genetics

• Publication date

  2004-10-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1534/GENETICS.104.030460PMID 15514054PMCID PMC1448816
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Distribution of plastocyanin and soluble plastidic cytochrome c in various classes of algae

  2004cited by this paper
• Identification of a copper transporter family in Arabidopsis thaliana

  2003cited by this paper
• Arabidopsis CHL27, located in both envelope and thylakoid membranes, is required for the synthesis of protochlorophyllide

  2003cited by this paper
• Chlamydomonas reinhardtii at the Crossroads of Genomics

  2003cited by this paper
• PAA1, a P-Type ATPase of Arabidopsis, Functions in Copper Transport in Chloroplasts Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.011817.

  2003cited by this paper
• Adaptation to Fe‐deficiency requires remodeling of the photosynthetic apparatus

  2002influential reference
• The Involvement of a Multicopper Oxidase in Iron Uptake by the Green Algae Chlamydomonas reinhardtii 1

  2002influential reference
• Mechanisms of Copper Incorporation into Human Ceruloplasmin*

  2002cited by this paper
• Reciprocal Expression of Two Candidate Di-Iron Enzymes Affecting Photosystem I and Light-Harvesting Complex Accumulation

  2002influential reference
• Rubrivivax gelatinosus acsF (Previously orf358) Codes for a Conserved, Putative Binuclear-Iron-Cluster-Containing Protein Involved in Aerobic Oxidative Cyclization of Mg-Protoporphyrin IX Monomethylester

  2002cited by this paper
• Cadmium- and iron-stress-inducible gene expression in the green alga Chlamydomonas reinhardtii: evidence for H43 protein function in iron assimilation

  2002cited by this paper
• Copper-Dependent Iron Assimilation Pathway in the Model Photosynthetic Eukaryote Chlamydomonas reinhardtii

  2002influential reference
• Oxygen Deficiency Responsive Gene Expression inChlamydomonas reinhardtii through a Copper-Sensing Signal Transduction Pathway1

  2002influential reference
• Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

  2001cited by this paper
• Two Menkes-type ATPases Supply Copper for Photosynthesis inSynechocystis PCC 6803*

  2001cited by this paper
• Delivering copper within plant cells.

  2000cited by this paper
• Coordinate Copper- and Oxygen-responsive Cyc6 andCpx1 Expression in Chlamydomonas Is Mediated by the Same Element*

  2000cited by this paper
• The Crd1 gene encodes a putative di‐iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii

  2000influential reference
• Characterization of the Saccharomyces cerevisiae High Affinity Copper Transporter Ctr3*

  2000cited by this paper
• Pipes and wiring: the regulation of copper uptake and distribution in yeast.

  1999cited by this paper
• RESPONSIVE-TO-ANTAGONIST1, a Menkes/Wilson disease-related copper transporter, is required for ethylene signaling in Arabidopsis.

  1999cited by this paper
• Induction of Coproporphyrinogen Oxidase inChlamydomonas Chloroplasts Occurs via Transcriptional Regulation of Cpx1 Mediated by Copper Response Elements and Increased Translation from a Copper Deficiency-specific Form of the Transcript*

  1999influential reference
• Iron and copper transport in yeast and its relevance to human disease.

  1998cited by this paper
• The molecular biology of metal ion transport in Saccharomyces cerevisiae.

  1998cited by this paper
• Copper-responsive gene expression during adaptation to copper deficiency.

  1998cited by this paper
• Copper‐dependent reciprocal transcriptional regulation of methane monooxygenase genes in Methylococcus capsulatus and Methylosinus trichosporium

  1997cited by this paper
• Homeostatic Regulation of Copper Uptake in Yeast via Direct Binding of MAC1 Protein to Upstream Regulatory Sequences ofFRE1 and CTR1 *

  1997cited by this paper
• Identification and Functional Expression of HAH1, a Novel Human Gene Involved in Copper Homeostasis*

  1997cited by this paper
• hCTR1: a human gene for copper uptake identified by complementation in yeast.

  1997cited by this paper
• A Role for the Saccharomyces cerevisiae ATX1 Gene in Copper Trafficking and Iron Transport*

  1997cited by this paper
• The Copper Chaperone for Superoxide Dismutase*

  1997cited by this paper
• Delivering Copper Inside Yeast and Human Cells

  1997cited by this paper
• Iron‐regulated DNA binding by the AFT1 protein controls the iron regulon in yeast.

  1996cited by this paper
• The bacterial phleomycin resistance geneble as a dominant selectable marker inChlamydomonas

  1996cited by this paper
• Molecular Genetic Analysis of Plastocyanin Biosynthesis in Chlamydomonas reinhardtii*

  1996cited by this paper
• SCO1 and SCO2 Act as High Copy Suppressors of a Mitochondrial Copper Recruitment Defect in Saccharomyces cerevisiae*

  1996cited by this paper
• Regulated Copper Uptake in Chlamydomonas reinhardtii in Response to Copper Availability

  1996cited by this paper
• Characterization of COX17, a Yeast Gene Involved in Copper Metabolism and Assembly of Cytochrome Oxidase*

  1996cited by this paper
• Two copper-responsive elements associated with the Chlamydomonas Cyc6 gene function as targets for transcriptional activators.

  1995cited by this paper
• Cellular copper transport.

  1995cited by this paper
• The Menkes/Wilson disease gene homologue in yeast provides copper to a ceruloplasmin-like oxidase required for iron uptake.

  1995cited by this paper
• Degradation of Plastocyanin in Copper-deficient Chlamydomonas reinhardtii

  1995influential reference
• Coordinate expression of coproporphyrinogen oxidase and cytochrome c6 in the green alga Chlamydomonas reinhardtii in response to changes in copper availability.

  1995cited by this paper
• Molecular characterization of a copper transport protein in S. cerevisiae: an unexpected role for copper in iron transport.

  1994cited by this paper
• The FET3 gene of S. cerevisiae encodes a multicopper oxidase required for ferrous iron uptake.

  1994cited by this paper
• The Wilson disease gene is a putative copper transporting P–type ATPase similar to the Menkes gene

  1993cited by this paper
• The Wilson disease gene is a copper transporting ATPase with homology to the Menkes disease gene

  1993cited by this paper
• Isolation of a candidate gene for Menkes disease and evidence that it encodes a copper–transporting ATPase

  1993cited by this paper
• Isolation of a candidate gene for Menkes disease that encodes a potential heavy metal binding protein

  1993cited by this paper
• Isolation of a partial candidate gene for Menkes disease by positional cloning

  1993cited by this paper
• Isolation and structural characterization of the Chlamydomonas reinhardtii gene for cytochrome c6. Analysis of the kinetics and metal specificity of its copper-responsive expression.

  1991cited by this paper
• Dynamic interplay between two copper‐titrating components in the transcriptional regulation of cyt c6.

  1991cited by this paper
• High-frequency nuclear transformation of Chlamydomonas reinhardtii.

  1990cited by this paper
• The Chlamydomonas Sourcebook: A Comprehensive Guide to Biology and Laboratory Use

  1989cited by this paper
• The Chlamydomonas Sourcebook. A Comprehensive Guide to Biology and Laboratory Use. Elizabeth H. Harris. Academic Press, San Diego, CA, 1989. xiv, 780 pp., illus. $145.

  1989cited by this paper
• Isolation, sequence, and regulation by oxygen of the yeast HEM13 gene coding for coproporphyrinogen oxidase.

  1988cited by this paper
• The Cu(II)-repressible plastidic cytochrome c. Cloning and sequence of a complementary DNA for the pre-apoprotein.

  1987cited by this paper
• Metal ion regulated gene expression: use of a plastocyanin‐less mutant of Chlamydomonas reinhardtii to study the Cu(II)‐dependent expression of cytochrome c‐552.

  1987cited by this paper
• Regulation by copper of the expression of plastocyanin and cytochrome c552 in Chlamydomonas reinhardi

  1986cited by this paper
• Transcriptional interference in avian retroviruses—implications for the promoter insertion model of leukaemogenesis

  1984influential reference
• Interchangeable copper and iron proteins in algal photosynthesis. Studies on plastocyanin and cytochrome c-552 in Chlamydomonas.

  1978cited by this paper
• Effect of iron dificiency on levels of two ferredoxins and flavodoxin in a cyanobacterium

  1977cited by this paper

• The elements of life, photosynthesis and genomics.

  2025cites this paper
• Natural Variation in the Promoter of GmSPL9d Affects Branch Number in Soybean

  2024cites this paper
• Identification of a gene controlling levels of the copper response regulator 1 transcription factor in Chlamydomonas reinhardtii.

  2024cites this paper
• The NtSPL Gene Family in Nicotiana tabacum: Genome-Wide Investigation and Expression Analysis in Response to Cadmium Stress

  2023cites this paper
• Role of iron in gene expression and in the modulation of copper uptake in a freshwater alga: Insights on Cu and Fe assimilation pathways.

  2022cites this paper
• Copper Requirement and Acquisition by Marine Microalgae

  2022cites this paper
• Systematic Identification, Evolution and Expression Analysis of the SPL Gene Family in Sugarcane (Saccharum spontaneum)

  2021cites this paper
• Physiological mechanisms and adaptation strategies of plants under heavy metal micronutrient deficiency/toxicity conditions

  2021cites this paper
• Aerobic Barley Mg-protoporphyrin IX Monomethyl Ester Cyclase is Powered by Electrons from Ferredoxin

  2020cites this paper
• Single-cell RNA sequencing of batch Chlamydomonas cultures reveals heterogeneity in their diurnal cycle phase

  2020cites this paper
• Functional Validation of Glutamine synthetase and Glutamate synthase Genes in Durum Wheat near Isogenic Lines with QTL for High GPC

  2020cites this paper
• Tobacco NtabSPL6-2 can enhance local and systemic resistances of Arabidopsis thaliana to bacterial and fungal pathogens.

  2020cites this paper
• Genome-wide identification, phylogenetic and expression analysis of SBP-box gene family in barley (Hordeum vulgare L.)

  2019cites this paper
• A METE mutant of Chlamydomonas reinhardtii provides new perspectives on the evolution of vitamin B12 auxotrophy

  2019cites this paper
• Do Arabidopsis Squamosa promoter binding Protein‐Like genes act together in plant acclimation to copper or zinc deficiency?

  2019cites this paper
• Construction and analysis of a library of miRNA in gold-coloured mutant leaves of Ginkgo biloba L.

  2019cites this paper
• Sabeeha Merchant[OPEN]

  2019cites this paper
• Constitutive expression of NtabSPL6-1 in tobacco and Arabidopsis could change the structure of leaves and promote the development of trichomes.

  2019cites this paper
• Absolute quantification of selected photosynthetic electron transfer proteins in Chlamydomonas reinhardtii in the presence and absence of oxygen

  2018cites this paper
• A giant type I polyketide synthase participates in zygospore maturation in Chlamydomonas reinhardtii

  2018cites this paper
• Genome-wide analysis of the SPL/miR156 module and its interaction with the AP2/miR172 unit in barley

  2018cites this paper
• The soluble guanylate cyclase CYG12 is required for the acclimation to hypoxia and trophic regimes in Chlamydomonas reinhardtii

  2018cites this paper
• Interactions Between Copper Homeostasis and Metabolism in Plants

  2017cites this paper
• Genomic organization, phylogenetic comparison, and expression profiles of the SPL family genes and their regulation in soybean

  2017cites this paper
• Genome-wide identification and characterization of the SPL gene family in Ziziphus jujuba.

  2017cites this paper
• Chlamydomonas: Anoxic Acclimation and Signaling

  2017cites this paper
• Chlamydomonas: Regulation Toward Metal Deficiencies

  2017cites this paper
• Chlamydomonas: Molecular Genetics and Physiology

  2017cites this paper
• Use of microalgae Chlamydomonas reinhardtii for production of double-stranded RNA against shrimp virus

  2016cites this paper
• Ni induces the CRR1-dependent regulon revealing overlap and distinction between hypoxia and Cu deficiency responses in Chlamydomonas reinhardtii.

  2016cites this paper
• Genomic organization, differential expression, and functional analysis of the SPL gene family in Gossypium hirsutum

  2015cites this paper
• Activation of Autophagy by Metals in Chlamydomonas reinhardtii

  2015cites this paper
• Chlamydomonas Genome Resource for Laboratory Strains Reveals a Mosaic of Sequence Variation, Identifies True Strain Histories, and Enables Strain-Specific Studies

  2015cites this paper
• The Role of Copper in the Oxidative Stress Response of Chlamydomonas reinhardtii to heat shock

  2015influential citation
• Profile of Sabeeha Merchant

  2015cites this paper
• Transcriptional response to copper excess and identification of genes involved in heavy metal tolerance in the extremophilic microalga Chlamydomonas acidophila

  2015cites this paper
• Mitochondria and copper homeostasis in plants.

  2014cites this paper
• Ion homeostasis in the Chloroplast

  2014cites this paper
• FUNCTIONAL VALIDATION OF SQUAMOSA PROMOTER BINDING LIKE SPL TRANSCRIPTION FACTOR IN COTTON FIBER DEVELOPMENT

  2014cites this paper
• Cloning and characterization of the Oryza sativa wall-associated kinase gene OsWAK11 and its transcriptional response to abiotic stresses

  2014cites this paper
• Use of extracts from oyster shell and soil for cultivation of Spirulina maxima

  2014cites this paper
• Copper Homeostasis: Regulation in Plants

  2013cites this paper
• Hypoxic survival requires a 2-on-2 hemoglobin in a process involving nitric oxide

  2013cites this paper
• Xanthophyll cycle induction by anaerobic conditions under low light in Chlamydomonas reinhardtii

  2013cites this paper
• Low Oxygen Response Mechanisms in Green Organisms

  2013cites this paper
• The copper metallome in eukaryotic cells.

  2013cites this paper
• Photo-bleaching of Chlamydomonas reinhardtii after dark-anoxic incubation

  2013cites this paper
• COPPER RESPONSE REGULATOR1–Dependent and –Independent Responses of the Chlamydomonas reinhardtii Transcriptome to Dark Anoxia[W]

  2013influential citation
• Using an RSP3 reporter gene system to investigate molecular regulation of hydrogenase expression in Chlamydomonas reinhardtii

  2013cites this paper
• Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation.

  2012cites this paper
• The Proteome of Copper, Iron, Zinc, and Manganese Micronutrient Deficiency in Chlamydomonas reinhardtii*

  2012cites this paper
• Differential Expression of the Chlamydomonas [FeFe]-Hydrogenase-Encoding HYDA1 Gene Is Regulated by the COPPER RESPONSE REGULATOR11[C][W]

  2012influential citation
• Transcription Factor–Dependent Chromatin Remodeling at Heat Shock and Copper-Responsive Promoters in Chlamydomonas reinhardtii[W][OA]

  2011cites this paper
• Systems Biology Approach in Chlamydomonas Reveals Connections between Copper Nutrition and Multiple Metabolic Steps[C][W][OA]

  2011cites this paper
• Global Analysis of Copper Responsiveness in Chlamydomonas

  2011cites this paper
• Alternative photosynthetic electron transport pathways during anaerobiosis in the green alga Chlamydomonas reinhardtii.

  2011cites this paper
• Cloning and Expression Analysis of BplSPL2, a Novel SBP-Box Gene from Betula Platyphylla

  2010cites this paper
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  2010cites this paper
• SQUAMOSA promoter-binding protein-like transcription factors: star players for plant growth and development.

  2010cites this paper
• The CRR1 Nutritional Copper Sensor in Chlamydomonas Contains Two Distinct Metal-Responsive Domains[C][W][OA]

  2010cites this paper
• Anaerobic Expression of the Ferredoxin-Encoding FDX5 Gene of Chlamydomonas reinhardtii Is Regulated by the Crr1 Transcription Factor

  2010cites this paper
• Analysis of the High-Affinity Iron Uptake System at the Chlamydomonas reinhardtii Plasma Membrane

  2010cites this paper
• Chapter 4 Low Oxygen Signaling and Tolerance in Plants

  2009cites this paper
• SQUAMOSA Promoter Binding Protein–Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis[W]

  2009cites this paper
• Function Annotation of an SBP-box Gene in Arabidopsis Based on Analysis of Co-expression Networks and Promoters

  2009cites this paper
• Transition Metal Nutrition: A Balance Between Deficiency and Toxicity

  2009cites this paper
• Copper in plants: acquisition, transport and interactions.

  2009cites this paper
• Two Chlamydomonas CTR Copper Transporters with a Novel Cys-Met Motif Are Localized to the Plasma Membrane and Function in Copper Assimilation[W]

  2009influential citation
• RESULTS The cis Elements of the miR 398 Promoter Are Essential for Response to Copper Deficiency In Arabidopsis

  2009cites this paper
• Facing the challenges of Cu, Fe and Zn homeostasis in plants.

  2009cites this paper
• Nucleotide sequence and phylogeny of a plastocyanin gene in the marine diatom

  2009cites this paper
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  2008cites this paper
• Nucleotide sequence and phylogeny of a plastocyanin gene in the marine diatom, Thalassiosira oceanica.

  2008cites this paper
• Recent overview of the Mg branch of the tetrapyrrole biosynthesis leading to chlorophylls

  2008cites this paper
• Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family.

  2008cites this paper
• A Ferroxidase Encoded by FOX1 Contributes to Iron Assimilation under Conditions of Poor Iron Nutrition in Chlamydomonas

  2008cites this paper
• Running title: Iron assimilation in Chlamydomonas

  2007cites this paper
• Copper and iron homeostasis in Arabidopsis: responses to metal deficiencies, interactions and biotechnological applications.

  2007cites this paper
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  2007cites this paper
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  2007cites this paper
• Trace Metal Utilization in Chloroplasts

  2007cites this paper
• Update on Metal Homeostasis in Cyanobacteria and Chloroplasts Metal Homeostasis in Cyanobacteria and Chloroplasts. Balancing Benefits and Risks to the Photosynthetic Apparatus

  2006cites this paper
• Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter

  2006cites this paper
• Chapter 10 Trace Metal Utilization in Chloroplasts

  2006influential citation
• Copper cofactor delivery in plant cells.

  2006cites this paper
• Parallel analysis of transcript levels and physiological key parameters allows the identification of stress phase gene markers in Chlamydomonas reinhardtii under copper excess.

  2006cites this paper
• Metal Homeostasis in Cyanobacteria and Chloroplasts. Balancing Benefits and Risks to the Photosynthetic Apparatus1

  2006cites this paper
• Effect of copper exposure on gene expression profiles in Chlamydomonas reinhardtii based on microarray analysis.

  2006cites this paper
• Between a rock and a hard place: trace element nutrition in Chlamydomonas.

  2006cites this paper
• Family matters: gene regulation by metal-dependent transcription factors

  2005cites this paper
• Xantha-l encodes a membrane subunit of the aerobic Mg-protoporphyrin IX monomethyl ester cyclase involved in chlorophyll biosynthesis.

  2005cites this paper
• A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element.

  2005cites this paper