Transcriptome-based distance measures for grouping of germplasm and prediction of hybrid performance in maize

No abstract is available for this paper.

• Publication year

  2009

• Venue

  Theoretical and Applied Genetics

• Publication date

  Unknown publication date

• Fields of study

  Agricultural and Food Sciences, Medicine, Biology

• Identifiers
  DOI 10.1007/s00122-009-1204-1PMID 19911157
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Prediction of maize single-cross hybrid performance: support vector machine regression versus best linear prediction

  2009cited by this paper
• Prediction of hybrid biomass in Arabidopsis thaliana by selected parental SNP and metabolic markers

  2009cited by this paper
• Correlation between parental transcriptome and field data for the characterization of heterosis in Zea mays L.

  2009cited by this paper
• Molecular marker-based prediction of hybrid performance in maize using unbalanced data from multiple experiments with factorial crosses

  2009cited by this paper
• Enriched partial correlations in genome-wide gene expression profiles of hybrids (A. thaliana): a systems biological approach towards the molecular basis of heterosis

  2009cited by this paper
• Prediction of hybrid performance in maize using molecular markers and joint analyses of hybrids and parental inbreds

  2009cited by this paper
• Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis

  2008cited by this paper
• Prediction of single-cross hybrid performance in maize using haplotype blocks associated with QTL for grain yield

  2007influential reference
• Allelic variation and heterosis in maize: how do two halves make more than a whole?

  2007cited by this paper
• Prediction of single-cross hybrid performance for grain yield and grain dry matter content in maize using AFLP markers associated with QTL

  2006influential reference
• Genome-wide transcript analysis of maize hybrids: allelic additive gene expression and yield heterosis

  2006cited by this paper
• Genetical and Mathematical Properties of Similarity and Dissimilarity Coefficients Applied in Plant Breeding and Seed Bank Management

  2005cited by this paper
• On the utility of pooling biological samples in microarray experiments.

  2005cited by this paper
• Genetic distance based on simple sequence Repeats and Heterosis in Tropical Maize Populations

  2003cited by this paper
• In Search of the Molecular Basis of Heterosis

  2003cited by this paper
• Statistical design and the analysis of gene expression microarray data.

  2001cited by this paper
• Chromosomal regions involved in hybrid performance and heterosis: their AFLP®-based identification and practical use in prediction models

  2000cited by this paper
• Genetics and Exploitation of Heterosis in Crops

  1999cited by this paper
• The Genetics and Exploitation of Heterosis in Crops

  1997cited by this paper
• Gentleman R: R: A language for data analysis and graphics

  1996cited by this paper
• The effect of population structure on the relationship between heterosis and heterozygosity at marker loci

  1994cited by this paper
• Genetic Diversity for RFLPs in European Maize Inbreds: I. Relation to Performance of Flint ✕ Dent Crosses for Forage Traits

  1992cited by this paper
• Genetic diversity for RFLPs in European maize inbreds

  1992cited by this paper

• Quantitative Insights into the Genetic Mechanisms of Crop Heterosis

  2025cites this paper
• Integrating Genetic Diversity and Agronomic Innovations for Climate-Resilient Maize Systems

  2025cites this paper
• Using phenomic selection to predict hybrid values with NIR spectra measured on the parental lines: proof of concept on maize

  2025cites this paper
• Leveraging artificial intelligence for bamboo breeding in the context of "Bamboo as a Substitute for Plastic" initiative

  2025cites this paper
• Effect of Chromosomal Localization of NGS-Based Markers on Their Applicability for Analyzing Genetic Variation and Population Structure of Hexaploid Triticale

  2024cites this paper
• Incorporating gene expression and environment for genomic prediction in wheat

  2024cites this paper
• One Hundred Years of Progress and Pitfalls: Maximising Heterosis through Increasing Multi-Locus Nuclear Heterozygosity

  2024cites this paper
• Transcriptome-based prediction for polygenic traits in rice using different gene subsets

  2024cites this paper
• Transgressive and parental dominant gene expression and cytosine methylation during seed development in Brassica napus hybrids

  2023cites this paper
• Correlation between Parental Transcriptome and Field Data for the Characterization of Heterosis in Chinese Cabbage

  2023cites this paper
• Population structure and genetic diversity of a germplasm for hybrid breeding in rye (Secale cereale L.) using high-density DArTseq-based silicoDArT and SNP markers

  2023cites this paper
• Transcriptomic prediction of breeding values in loblolly pine

  2023cites this paper
• Predicting hybrid rice performance using AIHIB model based on artificial intelligence

  2022cites this paper
• Assembly of yield heterosis of an elite rice hybrid is promising by manipulating dominant QTLs.

  2022cites this paper
• Dissecting the inheritance pattern of the anemone flower type and tubular floral traits of chrysanthemum in segregating F1 populations

  2022cites this paper
• Phenomic selection in wheat breeding: identification and optimisation of factors influencing prediction accuracy and comparison to genomic selection

  2022cites this paper
• Phenomic selection in wheat breeding: prediction of the genotype-by-environment interaction in multi-environment breeding trials

  2022cites this paper
• Leveraging a graft collection to develop metabolome-based trait prediction for the selection of tomato rootstocks with enhanced salt tolerance

  2022cites this paper
• Merging Genomics and Transcriptomics for Predicting Fusarium Head Blight Resistance in Wheat

  2021cites this paper
• Comparative transcriptome analyses of different Salvia miltiorrhiza varieties during the accumulation of tanshinones

  2021cites this paper
• Multi-omics-based prediction of hybrid performance in canola

  2021cites this paper
• Tomato fruit quality traits and metabolite content are affected by reciprocal crosses and heterosis.

  2021cites this paper
• Genomic selection: A breakthrough technology in rice breeding

  2021cites this paper
• Combining Ability and Heterosis in Diallel Analysis of Maize (Zea mays L.) Lines

  2020cites this paper
• Heterosis Breeding in Eggplant (Solanum melongena L.): Gains and Provocations

  2020cites this paper
• Assessment of heterosis based on parental genetic distance estimated with SSR and SNP markers in upland cotton (Gossypium hirsutum L.)

  2020cites this paper
• Genetic structure of a germplasm for hybrid breeding in rye (Secale cereale L.)

  2020cites this paper
• Dependence of the Heterosis Effect on Genetic Distance, Determined using Various Molecular Markers

  2020cites this paper
• Incorporation of parental phenotypic data into multi‐omic models improves prediction of yield‐related traits in hybrid rice

  2020cites this paper
• Application of Conventional, Biotechnological and Genomics Approaches for Eggplant (Solanum melongena.L). Breeding with a Focus on Bioactive Phenolics.

  2019cites this paper
• Identification of optimal prediction models using multi-omic data for selecting hybrid rice

  2019cites this paper
• Dissecting Heterosis During the Ear Inflorescence Development Stage in Maize via a Metabolomics-based Analysis

  2019cites this paper
• Transcriptome-Based Prediction of Complex Traits in Maize[OPEN]

  2019cites this paper
• AppleMDO: A Multi-Dimensional Omics Database for Apple Co-Expression Networks and Chromatin States

  2019cites this paper
• Transcriptome and Metabolite Profiling Reveal Novel Insights into Volatile Heterosis in the Tea Plant (Camellia Sinensis)

  2019cites this paper
• A directed learning strategy integrating multiple omic data improves genomic prediction

  2019cites this paper
• Optimizing Trait Predictability in Hybrid Rice Using Superior Prediction Models and Selective Omic Datasets

  2018cites this paper
• Toward Redesigning Hybrid Maize Breeding Through Genomics-Assisted Breeding

  2018cites this paper
• Small RNA-based prediction of hybrid performance in maize

  2018influential citation
• Signatures of divergent selection for cold tolerance in maize

  2018cites this paper
• Classification-driven framework to predict maize hybrid field performance from metabolic profiles of young parental roots

  2018cites this paper
• Omics Technologies in Unraveling Plant Stress Responses; Using Sorghum as a Model Crop, How Far Have We Gone?

  2018cites this paper
• Parental Expression Variation of Small RNAs Is Negatively Correlated with Grain Yield Heterosis in a Maize Breeding Population

  2018influential citation
• Hybridity has a greater effect than paternal genome dosage on heterosis in sugar beet (Beta vulgaris)

  2018cites this paper
• Diallel genetic analysis for multiple traits in eggplant and assessment of genetic distances for predicting hybrids performance

  2018cites this paper
• Prediction of hybrid performance in maize with transcriptome data

  2017cites this paper
• Omics-based hybrid prediction in maize

  2017influential citation
• Genotype-by-environment interactions affecting heterosis in maize

  2017cites this paper
• Transcriptome‐based prediction of hybrid performance with unbalanced data from a maize breeding programme

  2017cites this paper
• HETEROSIS PREDICTION THROUGH MOLECULAR MARKERS

  2017cites this paper
• Dissecting combining ability effect in a rice NCII-III population provides insights into heterosis in indica-japonica cross

  2017cites this paper
• Hybridization and emergence of virulence in opportunistic human yeast pathogens

  2017cites this paper
• Metabolomic prediction of yield in hybrid rice.

  2016cites this paper
• Genomics-assisted characterization of a breeding collection of Apios americana, an edible tuberous legume

  2016cites this paper
• Evaluation of the utility of gene expression and metabolic information for genomic prediction in maize

  2016cites this paper
• Prediction of hybrid performance in maize with a ridge regression model employed to DNA markers and mRNA transcription profiles

  2016cites this paper
• Relationships between genetic distance, combining ability and heterosis in rapeseed (Brassica napus L.)

  2016cites this paper
• Metabolic prediction of important agronomic traits in hybrid rice (Oryza sativa L.)

  2016cites this paper
• The possibilities of the prediction of the genetic potential of the tomato (Solanum lycopersicum L.) F1 based on the assessment of a simple sequence research polymorphism

  2015cites this paper
• Genome-based establishment of a high-yielding heterotic pattern for hybrid wheat breeding

  2015cites this paper
• Genetic diversity in Zea mays primary root growth rate, global gene transcript profile and proline content in response to osmotic stress and osmotic stress recovery

  2015cites this paper
• Heterosis and Interspecific Hybridization

  2015cites this paper
• Prediction of heterosis in crop plants - status and prospects.

  2015cites this paper
• Heterosis Prediction Using DNA Markers

  2015cites this paper
• Sorghum Molecular Breeding

  2015cites this paper
• Predicting Heterosis and F 1 Performance based on Combing Ability and Molecular Genetic Distance of Parental Lines in Ethiopian Mustard

  2015cites this paper
• Analysis of small RNA expression in the context of heterosis formation in Zea mays L.

  2014influential citation
• Deducing Hybrid Performance from Parental Metabolic Profiles of Young Primary Roots of Maize by Using a Multivariate Diallel Approach

  2014cites this paper
• A next generation of studies: Heterosis and inbreeding depression

  2014cites this paper
• Genome-wide meta-analysis of maize heterosis reveals the potential role of additive gene expression at pericentromeric loci

  2014cites this paper
• Heterosis in Plants

  2014cites this paper
• Gene Expression and Heterosis in Maize Hybrids

  2013cites this paper
• Integrating “Omics” Data and Expression QTL to Understand Maize Heterosis

  2013cites this paper
• Genomic prediction of sunflower hybrid performance

  2013cites this paper
• The contribution of repeat associated small RNAs to genetic variation, hybrid vigor and inbreeding depression in maize

  2013cites this paper
• Parent Selection – Usefulness and Prediction of Hybrid Performance

  2013cites this paper
• Genetic Rules of Heterosis in Plants

  2013cites this paper
• Non-DNA Biomarkers

  2013cites this paper
• Transcriptome-Based Prediction of Heterosis and Hybrid Performance

  2013cites this paper
• Diagnostics in Plant Breeding

  2013influential citation
• [Mechanism on differential gene expression and heterosis formation].

  2013cites this paper
• Hybrid breeding in wheat: technologies to improve hybrid wheat seed production.

  2013cites this paper
• The strategy and potential utilization of temperate germplasm for tropical germplasm improvement: a case study of maize (Zea mays L.)

  2012cites this paper
• Models and methods for computer simulations as a resource in plant breeding

  2012cites this paper
• Performance prediction of F1 hybrids between recombinant inbred lines derived from two elite maize inbred lines

  2012cites this paper
• Conversion of the Statistical Combining Ability into a Genetic Concept

  2012cites this paper
• Identifying Loci Influencing 1,000-Kernel Weight in Wheat by Microsatellite Screening for Evidence of Selection during Breeding

  2012cites this paper
• Genetic Basis of Heterosis and Prediction of Hybrid Performance

  2012cites this paper
• Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents

  2012cites this paper
• Molecular Markers for Harnessing Heterosis

  2012cites this paper
• MicroRNA Transcriptomic Analysis of Heterosis during Maize Seed Germination

  2012cites this paper
• Comparison of hybrid vigor based on parental distance in SSR markers and agronomic traits in mungbean (Vigna radiata (L.) Wilczek)

  2012cites this paper
• Heterosis: emerging ideas about hybrid vigour.

  2012cites this paper
• Identifying loci influencing grain number by microsatellite screening in bread wheat (Triticum aestivum L.)

  2012cites this paper
• The Magic of Heterosis: New Tools and Complexities

  2011cites this paper
• Parental epigenetic difference in DNA methylation-level may play contrasting roles for different agronomic traits related to yield heterosis in maize

  2011cites this paper
• A unifying theory for general multigenic heterosis: energy efficiency, protein metabolism, and implications for molecular breeding.

  2011cites this paper
• Association Mapping for Enhancing Maize (Zea mays L.) Genetic Improvement

  2011cites this paper
• The role and basics of computer simulation in support of critical decisions in plant breeding

  2011cites this paper
• REML-Based Diallel Analysis

  2011cites this paper