Polymorphisms in Cinnamoyl CoA Reductase (CCR) Are Associated With Variation in Microfibril Angle in Eucalyptus spp.

No abstract is available for this paper.

• Publication year

  2005

• Venue

  Genetics

• Publication date

  2005-11-01

• Fields of study

  Biology, Medicine, Materials Science, Environmental Science

• Identifiers
  DOI 10.1534/genetics.105.042028PMID 16085705PMCID PMC1456829
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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• Stiffness of wood in fast-grown plantation softwoods: the influence of microfibril angle.

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