Diazotrophic diversity, nifH gene expression and nitrogenase activity in a rice paddy field in Fujian, China

No abstract is available for this paper.

• Publication year

  2009

• Venue

  Plant and Soil

• Publication date

  2009-04-29

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.1007/s11104-009-9970-8
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Evidence for the functional significance of diazotroph community structure in soil

  2009cited by this paper
• Diversity of nifH gene pools in the rhizosphere of two cultivars of sorghum (Sorghum bicolor) treated with contrasting levels of nitrogen fertilizer.

  2008cited by this paper
• Variation in the active diazotrophic community in rice paddy - nifH PCR-DGGE analysis of rhizosphere and bulk soil

  2008influential reference
• Prevalence of Betaproteobacterial Sequences in nifH Gene Pools Associated with Roots of Modern Rice Cultivars

  2008cited by this paper
• Primer and probe sets for group‐specific quantification of the genera Nitrosomonas and Nitrosospira using real‐time PCR

  2008cited by this paper
• Evaluation of PCR primers for universal nifH gene targeting and for assessment of transcribed nifH pools in roots of Oryza longistaminata with and without low nitrogen input.

  2008cited by this paper
• Quantification of Salmonella spp. in composted biosolids using a TaqMan qPCR assay.

  2007cited by this paper
• Low genomic diversity in tropical oceanic N2-fixing cyanobacteria

  2007cited by this paper
• Quantification of mRNA in Salmonella sp. seeded soil and chicken manure using magnetic capture hybridization RT-PCR.

  2007cited by this paper
• Epilithic Cyanobacterial Communities of a Marine Tropical Beach Rock (Heron Island, Great Barrier Reef): Diversity and Diazotrophy

  2007cited by this paper
• Optimization of methods for detecting Mycobacterium avium subsp. paratuberculosis in environmental samples using quantitative, real-time PCR.

  2007cited by this paper
• Effect of temperature on composition of the methanotrophic community in rice field and forest soil.

  2007cited by this paper
• Structure and activity of bacterial community inhabiting rice roots and the rhizosphere.

  2006cited by this paper
• Vertical distributions of nitrogen-fixing phylotypes at Stn ALOHA in the oligotrophic North Pacific Ocean

  2005cited by this paper
• Influence of different Oryza cultivars on expression of nifH gene pools in roots of rice.

  2005cited by this paper
• Pleomorphomonas oryzae gen. nov., sp. nov., a nitrogen-fixing bacterium isolated from paddy soil of Oryza sativa.

  2005cited by this paper
• Contamination of diverse nifH and nifH-like DNA into commercial PCR primers.

  2005cited by this paper
• Biodiversity and seasonal variation of the cyanobacterial assemblage in a rice paddy field in Fujian, China.

  2005cited by this paper
• Isolation and characterization of diazotrophic growth promoting bacteria from rhizosphere of agricultural crops of Korea.

  2005cited by this paper
• Epiphytic Cyanobacteria on Chara vulgaris Are the Main Contributors to N2 Fixation in Rice Fields

  2004cited by this paper
• Prospects and potentials for systems of biological nitrogen fixation in sustainable rice production

  2004cited by this paper
• Non-symbiotic bacterial diazotrophs in crop-farming systems : can their potential for plant growth promotion be better exploited?

  2004cited by this paper
• Diurnal expression of hetR and diazocyte development in the filamentous non-heterocystous cyanobacterium Trichodesmium erythraeum.

  2003cited by this paper
• Nitrogenase gene diversity and microbial community structure: a cross-system comparison.

  2003cited by this paper
• mRNA Extraction and Reverse Transcription-PCR Protocol for Detection of nifH Gene Expression by Azotobacter vinelandii in Soil

  2003cited by this paper
• Cultivable heterotrophic N2-fixing bacterial diversity in rice fields in the Yangtze River Plain

  2002cited by this paper
• Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state.

  2002cited by this paper
• Phylogenetic and Morphological Diversity of Cyanobacteria in Soil Desert Crusts from the Colorado Plateau

  2001cited by this paper
• Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil.

  2001influential reference
• Cyanobacterial biofertilizers in rice agriculture

  2001cited by this paper
• Bulk and Rhizosphere Soil Bacterial Communities Studied by Denaturing Gradient Gel Electrophoresis: Plant-Dependent Enrichment and Seasonal Shifts Revealed

  2001cited by this paper
• Simultaneous Recovery of RNA and DNA from Soils and Sediments

  2001cited by this paper
• Diversity and Seasonal Fluctuations of the Dominant Members of the Bacterial Soil Community in a Wheat Field as Determined by Cultivation and Molecular Methods

  2001cited by this paper
• Soil Community Analysis Using DGGE of 16S rDNA Polymerase Chain Reaction Products

  2000cited by this paper
• Preferential occurrence of diazotrophic endophytes, Azoarcus spp., in wild rice species and land races of Oryza sativa in comparison with modern races.

  2000cited by this paper
• Organization and expression of nitrogen-fixation genes in the aerobic nitrogen-fixing unicellular cyanobacterium Synechococcus sp. strain RF-1.

  1999cited by this paper
• Molecular Analyses of the Methane-Oxidizing Microbial Community in Rice Field Soil by Targeting the Genes of the 16S rRNA, Particulate Methane Monooxygenase, and Methanol Dehydrogenase

  1999cited by this paper
• Acclimation of Cyanobacterial Communities in Rice Fields and Response of Nitrogenase Activity to Light Regime

  1998cited by this paper
• N2-Fixing Microbial Consortia Associated with the Ice Cover of Lake Bonney, Antarctica

  1998influential reference
• PCR primers to amplify 16S rRNA genes from cyanobacteria

  1997cited by this paper
• Phylogeny of cyanobacterial nifH genes: evolutionary implications and potential applications to natural assemblages.

  1997cited by this paper
• Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

  1997cited by this paper
• Cyanobacteria in rice soils

  1994cited by this paper
• Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii

  1989cited by this paper
• Nitrogen-fixing nonlegumes in Egypt. I. Nodulation and N2(C2H2) fixation by Casuarina equisetifolia.

  1980cited by this paper
• Diurnal variations of nitrogenase activity in the field.

  1974cited by this paper
• The acetylene-ethylene assay for n(2) fixation: laboratory and field evaluation.

  1968cited by this paper

• Enhancing biological nitrogen fixation in rice paddy ecosystems: challenges, opportunities, and sustainable strategies.

  2026cites this paper
• Dissimilatory nitrate reduction to ammonium (DNRA): A unique biogeochemical cycle to improve nitrogen (N) use efficiency and reduce N-loss in rice paddy

  2024cites this paper
• Molecular Analysis of the Microbial Guild Fixing Nitrogen in Ricefield Soils in Missouri

  2024cites this paper
• Nitrogen metabolism pathways and functional microorganisms in typical karst wetlands

  2024cites this paper
• Mechanism of microbial action of the inoculated nitrogen-fixing bacterium for growth promotion and yield enhancement in rice (Oryza sativa L.)

  2024cites this paper
• Comparing the benthic nitrogenase activity and diazotrophic community assembly of three large river-connected freshwater lakes in eastern China.

  2024cites this paper
• Biochar and Flooding Increase and Change the Diazotroph Communities in Tropical Paddy Fields

  2024cites this paper
• Abundance and diversity of endophytic and rhizospheric diazotrophs associated with rice roots from different rice rotation systems under field conditions

  2023cites this paper
• Prevalence of Deltaproteobacterial sequences in nifH gene pools associated with the rhizosphere of native switchgrass from Tall Grass Prairie (Oklahoma, USA)

  2023cites this paper
• Effects of straw addition on biological nitrogen fixation under continuous and intermittent flooding irrigation in a rice cropping system

  2023cites this paper
• Biological nitrogen fixation in the long-term nitrogen-fertilized and unfertilized paddy fields, with special reference to diazotrophic iron-reducing bacteria

  2023cites this paper
• Effects of biochar and chemical fertilizer amendment on diazotrophic abundance and community structure in rhizosphere and bulk soils

  2022cites this paper
• Alpine meadow degradation depresses soil nitrogen fixation by regulating plant functional groups and diazotrophic community composition

  2021cites this paper
• Carbon substrates exert a stronger role than mineral nitrogen application in structuring soil diazotroph communities during Chinese milk vetch growth

  2021cites this paper
• Effects of deep placement of fertilizer on periphytic biofilm development and nitrogen cycling in paddy systems

  2021cites this paper
• Community Composition and Co-Occurrence Patterns of Diazotrophs along a Soil Profile in Paddy Fields of Three Soil Types in China

  2021cites this paper
• How do different nitrogen application levels and irrigation practices impact biological nitrogen fixation and its distribution in paddy system?

  2021cites this paper
• Enhancement of the nitrogen-fixing activity of paddy soils owing to iron application

  2021cites this paper
• Straw Mulching and Nitrogen Fertilization Affect Diazotroph Communities in Wheat Rhizosphere

  2021cites this paper
• Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities

  2021cites this paper
• Rhizosphere Biology: Interactions Between Microbes and Plants

  2021cites this paper
• Co-occurrence of rhizobacteria with nitrogen fixation and/or 1-aminocyclopropane-1-carboxylate deamination abilities in the maize rhizosphere.

  2020cites this paper
• Diazotrophic Community Variation Underlies Differences in Nitrogen Fixation Potential in Paddy Soils Across a Climatic Gradient in China

  2020cites this paper
• Microbial structure of carbon source utilization in rice rhizosphere and non‐rhizosphere soils with different short‐term tillage management

  2020cites this paper
• Diazotrophic Nitrogen Fixation in the Rhizosphere and Endosphere

  2020cites this paper
• Diazotrophic Community Variation Underlies Differences in Nitrogen Fixation Potential in Paddy Soils Across a Climatic Gradient in China

  2020cites this paper
• Unveiling of active diazotrophs in a flooded rice soil by combination of NanoSIMS and 15N2-DNA-stable isotope probing

  2020cites this paper
• The impact of stabilizing amendments on the microbial community and metabolism in cadmium-contaminated paddy soils

  2020cites this paper
• Utilization of carbon sources in the rice rhizosphere and nonrhizosphere soils with different long‐term fertilization management

  2019cites this paper
• Diazotroph abundance and community structure are reshaped by straw return and mineral fertilizer in rice-rice-green manure rotation

  2019cites this paper
• Soil aluminum oxides determine biological nitrogen fixation and diazotrophic communities across major types of paddy soils in China

  2019cites this paper
• Long-term application of nitrogen, not phosphate or potassium, significantly alters the diazotrophic community compositions and structures in a Mollisol in northeast China.

  2019cites this paper
• Molecular Analyses of the Distribution and Function of Diazotrophic Rhizobia and Methanotrophs in the Tissues and Rhizosphere of Non-Leguminous Plants

  2019cites this paper
• Long-term manure addition reduces diversity and changes community structure of diazotrophs in a neutral black soil of northeast China

  2018cites this paper
• Fertilization with inorganic and organic nutrients changes diazotroph community composition and N-fixation rates

  2018cites this paper
• Nitrogen Fixation in Cereals

  2018cites this paper
• Impact of Pesticides on PGPR Activity of Azotobacter sp. Isolated from Pesticide Flooded Paddy Soils

  2018cites this paper
• Putative Nitrogen-Fixing Bacteria Associated With the Rhizosphere and Root Endosphere of Wheat Plants Grown in an Andisol From Southern Chile

  2018cites this paper
• Effects of uranium concentration on microbial community structure and functional potential

  2017cites this paper
• Tools to evaluate Herbaspirillum seropedicae abundance and nifH and rpoC expression in inoculated maize seedlings grown in vitro and in soil

  2017cites this paper
• Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics

  2017cites this paper
• Impact of fertilization regimes on diazotroph community compositions and N2-fixation activity in paddy soil

  2017cites this paper
• Long-term aromatic rice cultivation effect on frequency and diversity of diazotrophs in its rhizosphere

  2017cites this paper
• Response of the Coral Associated Nitrogen Fixing Bacteria Toward Elevated Water Temperature

  2017cites this paper
• DIAZOTROPH ISOLATION AND nifH GENE EXPRESSION FROM RHIZOSPHERE OF RICE (Oryza sativa L.)

  2016cites this paper
• Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?

  2016cites this paper
• Phytostimulation du maïs par la bactérie Azospirillum lipoferum CRT1 : impact sur des communautés fonctionnelles du microbiote racinaire

  2016cites this paper
• Defining the nitrogen fixation community size , structure and relevancy in Nile tilapia aquaculture pond waters

  2016cites this paper
• Agronomic and environmental aspects of diazotrophic bacteria in rice fields

  2016cites this paper
• Effects of temperature on carbon and nitrogen metabolisms of porcelana microbial mat community : rates, strategies and gene expression.

  2016cites this paper
• Coral Holobiont Omics: Microbes and Dinoflagellates

  2016cites this paper
• Variation in diazotrophic community structure in forest soils reflects land use history

  2015cites this paper
• Effects of long-term application of chemical and organic fertilizers on the abundance of microbial communities involved in the nitrogen cycle

  2015cites this paper
• Effect of pesticides application on peanut (Arachis hypogaea L.) associated phosphate solubilizing soil bacteria

  2015cites this paper
• Effect of Plant Growth Promoting Rhizobacteria on Productivity and Nutrient Use Efficiency of Wheat (Triticum aestivum L.

  2015cites this paper
• The cyanobacterium Mastigocladus fulfills the nitrogen demand of a terrestrial hot spring microbial mat

  2015cites this paper
• Tallgrass Prairie of Northern Oklahoma Associated with Switchgrass in the Native Diversity of Nitrogen-Fixing Bacteria

  2014cites this paper
• Ecological and enzymatic responses to petroleum contamination.

  2014cites this paper
• Impact of pesticides on PGPR activity of azotobacter sp. isolated from pesticide flooded paddy soils

  2014cites this paper
• Community structures of N2 -fixing bacteria associated with the phyllosphere of a Holm oak forest and their response to drought.

  2014cites this paper
• A comprehensive aligned nifH gene database: a multipurpose tool for studies of nitrogen-fixing bacteria

  2014cites this paper
• Cyanobacteria in New Zealand indigenous grasslands

  2014cites this paper
• Environmental factors associated with heterotrophic nitrogen-fixing bacteria in water, sediment, and riparian soil of Suquía River

  2014cites this paper
• Plantations of native shrub species restore soil microbial diversity in the Horqin Sandy Land, northeastern China

  2014cites this paper
• Diversity of Nitrogen-Fixing Bacteria Associated with Switchgrass in the Native Tallgrass Prairie of Northern Oklahoma

  2014cites this paper
• Identification of nif D and nif H Genes of Methanotrophic Bacteria from Rice Field

  2014cites this paper
• , Kelly Tallgrass Prairie of Northern Oklahoma Associated with Switchgrass in the Native Diversity of Nitrogen-Fixing Bacteria

  2014cites this paper
• Culture-independent molecular approaches reveal a mostly unknown high diversity of active nitrogen-fixing bacteria associated with Pennisetum purpureum—a bioenergy crop

  2013cites this paper
• Plant growth-promoting rhizobacteria and root system functioning

  2013cites this paper
• The effects of pesticides on bacterial nitrogen fixers in peanut-growing area

  2013cites this paper
• Symbioses between cyanobacterial communities and feather mosses in boreal forests and consequences for dinitrogen fixation

  2013influential citation
• Near-surface sand-dust horizontal flux in Tazhong—the hinterland of the Taklimakan Desert

  2013cites this paper
• Structural and functional characterization of the microbial communities associated with the upland and irrigated rice rhizospheres in a neotropical Colombian savannah

  2013cites this paper
• The microbial mobilisation of sulphur and phosphorus in biochar amended soils

  2013cites this paper
• Biological Nitrogen Fixation: Importance, Associated Diversity, and Estimates

  2013cites this paper
• Towards a sustainable rice culture: the role of microbiota

  2013influential citation
• Phylogeny and characterisation of nifH gene pool from ex-tin mining soil of Eastlake, Kampar, Perak.

  2013cites this paper
• Plant growth-promoting rhizobacteria and root system

  2013cites this paper
• Quantitative Real-time Polymerase Chain Reaction for Tracking Microbial Gene Expression in Complex Environmental Matrices.

  2013cites this paper
• Microbial communities in paddy fields in the Mekong delta of Vietnam

  2012cites this paper
• Evidence for high-temperature in situ nifH transcription in an alkaline hot spring of Lower Geyser Basin, Yellowstone National Park.

  2012cites this paper
• Merging Genomics, Transcriptomics and Geochemistry to Assess Nitrogen Cycling in Terrestrial Hot Springs

  2012cites this paper
• Microbial diversity and multidimensional interactions in the rice ecosystem

  2012cites this paper
• Microbial Communities in Paddy Fields in the Mekong Delta of Vietnam Functional and Molecular Diversity

  2012cites this paper
• Abundance and diversity of nitrogen-fixing bacteria in rhizosphere and bulk paddy soil under different duration of organic management

  2012cites this paper
• Abundance and diversity of nitrogen-fixing bacteria in rhizosphere and bulk paddy soil under different duration of organic management

  2011cites this paper
• Histoire évolutive des Poaceae et relations avec la communauté bactérienne rhizosphérique

  2011cites this paper
• Evidence For The Functional Significance Of Microbial Diversity Among Free-Living Diazotrophs In Soils Of A Long Term Agricultural Site

  2011cites this paper
• Abundance and diversity of ammonia-oxidizing bacteria in rhizosphere and bulk paddy soil under different duration of organic management

  2011cites this paper
• Seasonal analyses of arbuscular mycorrhizae, nitrogen-fixing bacteria and growth performance of the salt marsh grass Spartina patens

  2010cites this paper
• Regional and local factors affecting diversity, abundance and activity of free-living, N2-fixing bacteria in Australian agricultural soils

  2010cites this paper