Prokaryotic translation: the interactive pathway leading to initiation.

No abstract is available for this paper.

• Publication year

  1994

• Venue

  Trends in Genetics

• Publication date

  1994-11-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1016/0168-9525(94)90057-4PMID 7809946
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Tracing the path of messenger RNA on the Escherichia coli small ribosomal subunit. Immune electron microscopy using defined oligodeoxynucleotide analogs of mRNA.

  1994cited by this paper
• Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between '+1' and '+16' on the mRNA, downstream from the decoding site.

  1993cited by this paper
• Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site‐directed cross‐linking study with mRNA analogues.

  1992cited by this paper
• Recognition of correct reading frame by the ribosome

  1992cited by this paper
• The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA

  1992cited by this paper
• Translation initiation in Escherichia coli: sequences within the ribosome‐binding site

  1992cited by this paper
• Translation of the prophage λ cl transcript

  1992cited by this paper
• Translation of the prophage lambda cl transcript.

  1992cited by this paper
• Structure-function correlations (and discrepancies) in the 16S ribosomal RNA from Escherichia coli.

  1992cited by this paper
• RNA-protein interactions in the Escherichia coli ribosome.

  1991cited by this paper
• Ribosome-messenger recognition: mRNA target sites for ribosomal protein S1

  1991cited by this paper
• Codon choice and potential complementarity between mRNA downstream of the initiation codon and bases 1471-1480 in 16S ribosomal RNA affects expression of glnS.

  1991cited by this paper
• Interplay of two cis-acting mRNA regions in translational control of sigma 32 synthesis during the heat shock response of Escherichia coli.

  1991cited by this paper
• Translational control of prokaryotic gene expression.

  1990cited by this paper
• Control of prokaryotic translational initiation by mRNA secondary structure

  1990cited by this paper
• Control of prokaryotic translational initiation by mRNA secondary structure.

  1990cited by this paper
• The initiation of translation in E. coli: apparent base pairing between the 16srRNA and downstream sequences of the mRNA.

  1990cited by this paper
• Three-dimensional localization of the NH2- and carboxyl-terminal domain of ribosomal protein S1 on the surface of the 30 S subunit from Escherichia coli.

  1990cited by this paper
• Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

  1990cited by this paper
• Alternative occupancy of a dual ribosomal binding site by mRNA affected by translation initiation factors.

  1989cited by this paper
• A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli.

  1989cited by this paper
• Substitution of an invariant nucleotide at the base of the highly conserved '530-loop' of 15S rRNA causes suppression of yeast mitochondrial ochre mutations.

  1989cited by this paper
• An additional ribosome-binding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: important determinants of the efficiency of translation-initiation.

  1989cited by this paper
• Ribosomal affinity and translational initiation in Escherichia coli. In vitro investigations using translational initiation regions of differing efficiencies from the atp operon.

  1989cited by this paper
• A translational enhancer derived from tobacco mosaic virus is functionally equivalent to a Shine-Dalgarno sequence.

  1989cited by this paper
• The role of bases upstream of the Shine-Dalgarno region and in the coding sequence in the control of gene expression in Escherichia coli: translation and stability of mRNAs in vivo.

  1989cited by this paper
• What constitutes the signal for the initiation of protein synthesis on Escherichia coli mRNAs?

  1988cited by this paper
• Expression of theunc genes inEscherichia coli

  1988cited by this paper
• A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit.

  1988cited by this paper
• Expression of the unc genes in Escherichia coli.

  1988cited by this paper
• Model for the three-dimensional folding of 16 S ribosomal RNA.

  1988cited by this paper
• Mutant 16S ribosomal RNA: a codon-specific translational suppressor.

  1988cited by this paper
• Posttranscriptional regulatory mechanisms in Escherichia coli.

  1988cited by this paper
• Messenger RNA recognition in Escherichia coli: a possible second site of interaction with 16S ribosomal RNA.

  1988cited by this paper
• Positions of S2, S13, S16, S17, S19 and S21 in the 30 S ribosomal subunit of Escherichia coli.

  1988cited by this paper
• Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli.

  1987cited by this paper
• A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins.

  1987cited by this paper
• Translational initiation frequency of atp genes from Escherichia coli: identification of an intercistronic sequence that enhances translation.

  1985cited by this paper
• Initiator tRNA may recognize more than the initiation codon in mRNA: a model for translational initiation.

  1985cited by this paper
• Escherichia coli translational initiation factor IF3: a unique case of translational regulation.

  1984cited by this paper
• Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.

  1983cited by this paper
• Structure and functions of ribosomal protein S1.

  1983cited by this paper
• Translational initiation in prokaryotes.

  1981cited by this paper
• The ribosome binding sites recognized by E. coli ribosomes have regions with signal character in both the leader and protein coding segments.

  1980cited by this paper

• Chloroplast proteostasis: A story of birth, life, and death

  2022cites this paper
• CRISPR-RNAa: targeted activation of translation using dCas13 fusions to translation initiation factors

  2022cites this paper
• Adhesive Functions or Pseudogenization of Type Va Autotransporters in Brucella Species

  2021cites this paper
• Calcium-Regulated Protein CarP Responds to Multiple Host Signals and Mediates Regulation of Pseudomonas aeruginosa Virulence by Calcium

  2021cites this paper
• Identification of polycistronic transcriptional units and non-canonical introns in green algal chloroplasts based on long-read RNA sequencing data

  2021cites this paper
• Critical Role for the Extended N Terminus of Chlamydial MreB in Directing Its Membrane Association and Potential Interaction with Divisome Proteins

  2020cites this paper
• Identi cation of Polycistronic Transcriptional Units and Non-canonical Introns in Green Algal Chloroplasts Based on Long-read RNA Sequencing Data

  2020cites this paper
• A proteogenomics workflow to uncover the world of small proteins in Staphylococcus aureus

  2020cites this paper
• Critical Role for the Unique N-Terminus of Chlamydial MreB in Directing Its Membrane Association and Interaction with Elements of the Divisome

  2019cites this paper
• RECOMBINATIONAL CLONING USING ENGINEERED RECOMBINATION SITES

  2017cites this paper
• NUCLECACDS HAVING RECOMBINATION SITES

  2017cites this paper
• Novel Translation Initiation Regulation Mechanism in Escherichia coli ptrB Mediated by a 5′-Terminal AUG

  2017cites this paper
• Characterization of the Selection of Multiple Start Codons Based on Variations in Riboome Binding Site Translation Initiation Strength

  2014cites this paper
• Entwicklung der Transkriptomsequenzierung und Anwendung zur Analyse des Transkriptoms von Corynebacterium glutamicum

  2014cites this paper
• ppGpp-based stringent response inhibitors: characterization in vivo and in vitro

  2013cites this paper
• Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique

  2013cites this paper
• Kinetic Dissection of Translation Initiation in Prokaryotes.

  2013cites this paper
• Comparative evaluation of rumen metagenome community using qPCR and MG-RAST

  2013cites this paper
• Statistics of N-terminal alignment as a guide for refining prokaryotic gene annotation.

  2012cites this paper
• Improving N-terminal protein annotation of Plasmodium species based on signal peptide prediction of orthologous proteins

  2012cites this paper
• Studies on Translation Initiation and Termination in Escherichia coli

  2012cites this paper
• The 5′ untranslated region of the soybean cytosolic glutamine synthetase β1 gene contains prokaryotic translation initiation signals and acts as a translational enhancer in plants

  2012cites this paper
• The Cryo-EM Structure of a Complete 30S Translation Initiation Complex from Escherichia coli

  2011cites this paper
• Local Absence of Secondary Structure Permits Translation of mRNAs that Lack Ribosome-Binding Sites

  2011cites this paper
• Study on the Function of Translation Initiation Factor IF1

  2011influential citation
• Tandem Translation Generates a Chaperone for the Salmonella Type III Secretion System Protein SsaQ*

  2011cites this paper
• Role of the Initiation Factors in mRNA Start Site Selection and fMet-tRNA Recruitment by Bacterial Ribosomes

  2010cites this paper
• RNA-mediated virulence gene regulation in the human pathogen Listeria monocytogenes

  2010cites this paper
• RIBOSOME - mRNA INTERACTIONS THAT CONTRIBUTE TO RECOGNITION AND BINDING OF A 5’-TERMINAL AUG START CODON

  2010influential citation
• The expression of recombinant genes in Escherichia coli can be strongly stimulated at the transcript production level by mutating the DNA‐region corresponding to the 5′‐untranslated part of mRNA

  2009cites this paper
• Designing and using synthetic RNA thermometers for temperature-controlled gene expression in bacteria

  2009cites this paper
• Efficient translation in chloroplasts requires element(s) upstream of the putative ribosome binding site from atpI.

  2009cites this paper
• Protein Synthesis in the Chloroplast

  2009cites this paper
• Questionable 16S ribosomal RNA gene annotations are frequent in completed microbial genomes.

  2008cites this paper
• Design of simple synthetic RNA thermometers for temperature-controlled gene expression in Escherichia coli

  2008cites this paper
• Essential elements in the coding region of mRNA for translation of ColE2 Rep protein.

  2008cites this paper
• Biochemical and genetic studies of mitochondrial protein synthesis in Saccharomyces cerevisiae : characterization of the AEP3 and TRM5 gene products

  2008cites this paper
• Structure and functions of hepatitis C virus proteins: 15 years after

  2008cites this paper
• A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction.

  2007influential citation
• Efficient expression of gene variants that harbour AGA codons next to the initiation codon

  2007cites this paper
• Investigating the in vivo activity of the DeaD protein using protein–protein interactions and the translational activity of structured chloramphenicol acetyltransferase mRNAs

  2007cites this paper
• Importance of the leader region of mRNA for translation initiation of ColE2 Rep protein.

  2007cites this paper
• Integrative Analysis of Transcriptomic and Proteomic Data: Challenges, Solutions and Applications

  2007cites this paper
• Translation Initiation of Cyanobacterial rbcS mRNAs Requires the 38-kDa Ribosomal Protein S1 but Not the Shine-Dalgarno Sequence

  2006cites this paper
• Correlation of mRNA Expression and Protein Abundance Affected by Multiple Sequence Features Related to Translational Efficiency in Desulfovibrio vulgaris: A Quantitative Analysis

  2006cites this paper
• Complete nucleotide sequence of a P2 family lysogenic bacteriophage, varphiMhaA1-PHL101, from Mannheimia haemolytica serotype A1.

  2006cites this paper
• Interactions between mRNA and Escherichia coli ribosomes that contribute to the formation of translation initiation complexes

  2006cites this paper
• Studies on translation initiation and gene expression in Escherichia coli

  2006cites this paper
• Efficient translation destabilizes transcripts in chloroplasts of Chlamydomonas reinhardtii.

  2006cites this paper
• Transcriptional and Translational Regulation of Photosystem II Gene Expression

  2005cites this paper
• Optimisation of a transcription-translation coupled in vitro system

  2005cites this paper
• Role of the N- and C-terminal extensions on the activity of mammalian mitochondrial translational initiation factor 3

  2005cites this paper
• Optimisation of a transcription-translation coupled in vitro system

  2005cites this paper
• Initiation of Protein Synthesis in Bacteria

  2005cites this paper
• IS200: an old and still bacterial transposon.

  2004cites this paper
• Escherichia coli mRNAs with strong Shine/Dalgarno sequences also contain 5' end sequences complementary to domain # 17 on the 16S ribosomal RNA.

  2004cites this paper
• Possible involvement of the 5'-flanking region and the 5'UTR of plastid accD gene in NEP-dependent transcription.

  2004cites this paper
• Regulation of Translation in Chloroplasts

  2004cites this paper
• Molecular Biology and Biotechnology of Plant Organelles

  2004cites this paper
• Initiation and elongation factors in mammalian mitochondrial protein biosynthesis.

  2004cites this paper
• RNA stem-loop enhanced expression of previously non-expressible genes.

  2004cites this paper
• Identification and characterization of a novel RNA binding protein that associates with the 5'-untranslated region of the chloroplast psbA mRNA.

  2004cites this paper
• The Shine-Dalgarno-like sequence is a negative regulatory element for translation of tobacco chloroplast rps2 mRNA: an additional mechanism for translational control in chloroplasts.

  2003cites this paper
• Non-Shine-Dalgarno Initiators of Translation Selected from Combinatorial DNA Libraries

  2003cites this paper
• Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 30S ribosomal subunit.

  2003cites this paper
• In vivo evidence for the prokaryotic model of extended codon–anticodon interaction in translation initiation

  2003cites this paper
• Protein S1 counteracts the inhibitory effect of the extended Shine-Dalgarno sequence on translation.

  2002cites this paper
• The lnitiation Codon Determines the Efficiency but Not the Site of Translation lnitiation in Chlamydomonas Chloroplasts

  2002cites this paper
• Analysis of cis-acting expression determinants of the tobacco psbA 5’UTR in vivo

  2002cites this paper
• Ribosomes

  2002cites this paper
• Inability Of Agrobacterium Tumefaciens Ribosomes To Translate In Vivo Mrnas Containing Non-Shine-Dalgarno Translational Initiators

  2002cites this paper
• The C-terminal part of the surface-associated protein MopE of the methanotroph Methylococcus capsulatus (Bath) is secreted into the growth medium

  2001cites this paper
• Analysis of cis-acting expression determinants of the tobacco psbA 5'UTR in vivo

  2001cites this paper
• A Role for Initiation Codon Context in Chloroplast Translation

  2001cites this paper
• Effects of 3′ Terminus Modifications on mRNA Functional Decay during in Vitro Protein Synthesis*

  2001cites this paper
• Sequences downstream of the translation initiation codon are important determinants of translation efficiency in chloroplasts.

  2001cites this paper
• An adenosyl–cobalamin (coenzyme‐B12)‐repressed translational enhancer in the cob mRNA of Salmonella typhimurium

  2001cites this paper
• Codon bias at the 3'-side of the initiation codon is correlated with translation initiation efficiency in Escherichia coli.

  2001cites this paper
• Initiation factors in the early events of mRNA translation in bacteria.

  2001cites this paper
• Sequence requirements for translation initiation of Rhopalosiphum padi virus ORF2.

  2000cites this paper
• Reinitiation of protein synthesis in Escherichia coli can be induced by mRNA cis‐elements unrelated to canonical translation initiation signals

  2000cites this paper
• A novel nucleic acid-binding protein in the cyanobacterium Synechococcus sp. PCC6301: a soluble 33-kDa polypeptide with high sequence similarity to ribosomal protein S1

  2000cites this paper
• Translational Regulation of Genes in Salmonella typhimurium by Vitamin B 12 BY SOLVEIG RAVNUM

  2000cites this paper
• Translation Initiation in Bacteria

  2000cites this paper
• Enhancing Activity of ε in Escherichia coli and Agrobacterium tumefaciens Cells

  2000cites this paper
• Translational Regulation of Genes in Salmonella typhimurium by Vitamin B12

  2000cites this paper
• Aspects of the regulation of expression of pcnB, which encodes poly (A) polymerase I of Escherichia coli

  2000cites this paper
• Translational Enhancement by an Element Downstream of the Initiation Codon in Escherichia coli*

  1999cites this paper
• Initiation of Translation

  1999cites this paper
• Efficiency of a novel non-Shine-Dalgarno and a Shine-Dalgarno consensus sequence to initiate translation in Escherichia coli of genes with different downstream box composition.

  1999cites this paper
• Discrimination by Escherichia coli initiation factor IF3 against initiation on non-canonical codons relies on complementarity rules.

  1999cites this paper
• Protein Drug Manufacturing

  1999cites this paper
• The chloroplast infA gene with a functional UUG initiation codon

  1999cites this paper
• Light-activated translation of chloroplast mRNAs.

  1999cites this paper
• The translation initiation signal in E. coli and its control.

  1999cites this paper
• Use of a short A/T-rich cassette for enhanced expression of cloned genes inEscherichia coli

  1999cites this paper
• Influence of growth conditions on RNA levels in relation to activity of core metabolic enzymes in the parasitic protists Trypanosoma brucei and Trichomonas vaginalis.

  1999cites this paper
• Mutations Altering the Predicted Secondary Structure of a Chloroplast 5′ Untranslated Region Affect Its Physical and Biochemical Properties as Well as Its Ability To Promote Translation of Reporter mRNAs Both in the Chlamydomonas reinhardtii Chloroplast and in Escherichia coli

  1999cites this paper
• Mutant analysis of Prevotella sp. plaA-lacZ fusion protein expression in Escherichia coli: support for an essential role of the stem-loop.

  1999cites this paper
• Translational Control in Prokaryotes

  1999cites this paper