The Indian Genome Variation database (IGVdb): a project overview

No abstract is available for this paper.

• Publication year

  2005

• Venue

  Human Genetics

• Publication date

  2005-11-01

• Fields of study

  Biology, Medicine

• Identifiers
  DOI 10.1007/s00439-005-0009-9PMID 16133172
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

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  1998cited by this paper
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  1996cited by this paper
• Demographic history of India and mtDNA-sequence diversity.

  1995cited by this paper
• The history and geography of human genes

  1995cited by this paper
• The costs of human inbreeding and their implications for variations at the DNA level

  1994influential reference
• People of India: An investigation of biological variability in ecological, ethno-economic, and linguistic groups

  1994cited by this paper
• This fissured land: An ecological history of India

  1993cited by this paper
• Structure of Human Populations in India

  1993influential reference
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  1992cited by this paper
• The People of South Asia

  1984cited by this paper
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  1984influential reference
• The rise of civilization in India and Pakistan

  1984cited by this paper
• Morphological composition of the people of India

  1978cited by this paper
• The prehistory and protohistory of India and Pakistan

  1976cited by this paper
• Molecular Pathology

  1976cited by this paper
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  1935cited by this paper

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