Epidemic Spread of Symbiotic and Non-Symbiotic Bradyrhizobium Genotypes Across California

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Microbial Ecology

• Publication date

  2015-10-14

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1007/s00248-015-0685-5PMID 26467244
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils

  2015cited by this paper
• Native California soils are selective reservoirs for multidrug-resistant bacteria.

  2015cited by this paper
• The Spread of Bradyrhizobium Lineages Across Host Legume Clades: from Abarema to Zygia

  2015cited by this paper
• A database for the taxonomic and phylogenetic identification of the genus Bradyrhizobium using multilocus sequence analysis

  2015cited by this paper
• Specialization-generalization trade-off in a Bradyrhizobium symbiosis with wild legume hosts

  2014cited by this paper
• The Jepson Manual: Vascular Plants of California

  2014cited by this paper
• Microbial taxonomy in the post-genomic era: Rebuilding from scratch?

  2014cited by this paper
• Efficiency of partner choice and sanctions in Lotus is not altered by nitrogen fertilization

  2014cited by this paper
• Evolutionary origins and diversification of proteobacterial mutualists

  2014cited by this paper
• Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies

  2013cited by this paper
• Microbiome Assembly across Multiple Body Sites in Low-Birthweight Infants

  2013cited by this paper
• Sequence-based discovery of Bradyrhizobium enterica in cord colitis syndrome.

  2013cited by this paper
• Complete Genome Sequence of Bradyrhizobium sp. S23321: Insights into Symbiosis Evolution in Soil Oligotrophs

  2012cited by this paper
• CircadiOmics: integrating circadian genomics, transcriptomics, proteomics and metabolomics

  2012cited by this paper
• Characterization of the Diversity and Temporal Stability of Bacterial Communities in Human Milk

  2011cited by this paper
• PASSaGE: Pattern Analysis, Spatial Statistics and Geographic Exegesis. Version 2

  2011cited by this paper
• Evolutionary Instability of Symbiotic Function in Bradyrhizobium japonicum

  2011cited by this paper
• New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.

  2010cited by this paper
• Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

  2010cited by this paper
• Origins of cheating and loss of symbiosis in wild Bradyrhizobium

  2010influential reference
• A complex journey: transmission of microbial symbionts

  2010cited by this paper
• In Situ Phylogenetic Structure and Diversity of Wild Bradyrhizobium Communities

  2009influential reference
• Fast UniFrac: Facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

  2009influential reference
• DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

  2009cited by this paper
• Multilocus sequence analysis of the genus Bradyrhizobium.

  2009cited by this paper
• Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere.

  2009cited by this paper
• The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571

  2008cited by this paper
• Multilocus Sequence Analysis for Assessment of the Biogeography and Evolutionary Genetics of Four Bradyrhizobium Species That Nodulate Soybeans on the Asiatic Continent

  2008cited by this paper
• GEIGER: investigating evolutionary radiations

  2008cited by this paper
• Legumes Symbioses: Absence of Nod Genes in Photosynthetic Bradyrhizobia

  2007cited by this paper
• Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules.

  2007cited by this paper
• The genome of Rhizobium leguminosarum has recognizable core and accessory components

  2006cited by this paper
• Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus.

  2006cited by this paper
• Pathogenicity islands: a molecular toolbox for bacterial virulence

  2006cited by this paper
• Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative.

  2006cited by this paper
• Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa

  2006cited by this paper
• Population genetics and phylogenetic inference in bacterial molecular systematics: the roles of migration and recombination in Bradyrhizobium species cohesion and delineation.

  2005cited by this paper
• Expression Islands Clustered on the Symbiosis Island of the Mesorhizobium loti Genome

  2004cited by this paper
• Structure and diversity among rhizobial strains, populations and communities : a review

  2004cited by this paper
• Genomic islands in pathogenic and environmental microorganisms

  2004cited by this paper
• Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus.

  2004cited by this paper
• MacClade 4: analysis of phy-logeny and character evolution

  2003cited by this paper
• Horizontal gene transfer accelerates genome innovation and evolution.

  2003cited by this paper
• Legumes: Importance and Constraints to Greater Use

  2003cited by this paper
• Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.

  2002cited by this paper
• Genetic structure of indigenous non-nodulating and nodulating populations of Bradyrhizobium in soils from Thailand

  2002cited by this paper
• Potential Symbiosis-Specific Genes Uncovered by Sequencing a 410-Kilobase DNA Region of the Bradyrhizobium japonicum Chromosome

  2001cited by this paper
• The Composite Genome of the Legume Symbiont Sinorhizobium meliloti

  2001cited by this paper
• Divergent Bradyrhizobium symbionts on Tachigali versicolor from Barro Colorado Island, Panama.

  2000cited by this paper
• Molecular Basis of Symbiotic Promiscuity

  2000cited by this paper
• The Yersinia high-pathogenicity island is present in different members of the family Enterobacteriaceae.

  2000cited by this paper
• Photosynthetic Bradyrhizobia Are Natural Endophytes of the African Wild Rice Oryza breviligulata

  2000cited by this paper
• Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.

  2000cited by this paper
• Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

  1999cited by this paper
• Reticulated and epidemic population genetic structure of Rhizobium etli biovar phaseoli in a traditionally managed locality in Mexico

  1999cited by this paper
• Global patterns of terrestrial biological nitrogen (N2) fixation in natural ecosystems

  1999cited by this paper
• Slow-growing and oligotrophic soil bacteria phylogenetically close to Bradyrhizobium japonicum

  1998cited by this paper
• Pathogenicity islands: bacterial evolution in quantum leaps.

  1996cited by this paper
• Signal Transduction in Rhizobium-Induced Nodule Formation

  1996cited by this paper
• Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus

  1996cited by this paper
• Diversity and phylogeny of rhizobia

  1996cited by this paper
• Pathogenicity Islands: Minireview Bacterial Evolution in Quantum Leaps

  1996cited by this paper
• Phenotypic and genotypic characterization of bradyrhizobia nodulating the leguminous tree Acacia albida.

  1994cited by this paper
• Genetic structure of a soil population of nonsymbiotic Rhizobium leguminosarum

  1991cited by this paper
• Molecular Evolutionary Genetics

  1987cited by this paper
• Estimating the recombination parameter of a finite population model without selection.

  1987cited by this paper
• Statistical properties of the number of recombination events in the history of a sample of DNA sequences.

  1985cited by this paper
• Evolutionary relationship of DNA sequences in finite populations.

  1983cited by this paper
• The Interaction of Selection and Linkage. I. General Considerations; Heterotic Models.

  1964cited by this paper
• Fertilization

  1911cited by this paper
• The Jepson Manual. Vascular Plants of California

  year unknowncited by this paper

• Maximizing Photosynthesis and Plant Growth in African Legumes Through Rhizobial Partnerships: The Road Behind and Ahead

  2025cites this paper
• High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona

  2025cites this paper
• Comparative genomics analysis reveals genetic characteristics and nitrogen fixation profile of Bradyrhizobium

  2024cites this paper
• Host control by Acmispon strigosus constrains fitness gains of ineffective Bradyrhizobium symbionts in mixed infections.

  2024cites this paper
• Investigating drivers of free-living diazotroph activity in paddy soils across China

  2024cites this paper
• Guidelines for the description of rhizobial symbiovars

  2024cites this paper
• Population genomics of Australian indigenous Mesorhizobium reveals diverse nonsymbiotic genospecies capable of nitrogen-fixing symbioses following horizontal gene transfer

  2023cites this paper
• Competitive interference among rhizobia reduces benefits to hosts.

  2023cites this paper
• Land utilization types impacted the species diversity and population distribution of nodulating and non-nodulating rhizobia in the Philippines

  2023cites this paper
• Phylogenetic Relationship, Symbiotic Effectiveness, and Biochemical Traits of Native Rhizobial Symbionts of Cowpea (Vigna unguiculata L. Walp) in South African Soil

  2022cites this paper
• Horizontal gene transfer of a unique nif island drives convergent evolution of free-living N2-fixing Bradyrhizobium

  2021cites this paper
• Partners in space: Discordant population structure between legume hosts and rhizobium symbionts in their native range

  2021cites this paper
• Evolutionary origin and ecological implication of a unique nif island in free-living Bradyrhizobium lineages

  2021cites this paper
• Evolution of specialization in a plant‐microbial mutualism is explained by the oscillation theory of speciation

  2021influential citation
• Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

  2021cites this paper
• Molecular, Physiological, and Symbiotic Characterization of Cowpea Rhizobia from Soils Under Different Agricultural Systems in the Semiarid Region of Brazil

  2020cites this paper
• Recurrent mutualism breakdown events in a legume rhizobia metapopulation

  2020influential citation
• Polycyclic aromatic hydrocarbon and n-alkane pollution characteristics and structural and functional perturbations to the microbial community: a case-study of historically petroleum-contaminated soil

  2020cites this paper
• Exploring Genetic Diversity and Signatures of Horizontal Gene Transfer in Nodule Bacteria Associated with Lotus japonicus in Natural Environments.

  2019cites this paper
• Fast and efficient symbiotic gene-based duplex PCR approach for the preliminary selection of legume root nodule bacteria

  2019cites this paper
• Interspecific conflict and the evolution of ineffective rhizobia.

  2019cites this paper
• Symbiotic nitrogen fixation by rhizobia-the roots of a success story.

  2018cites this paper
• Symbiotic N2-Fixer Community Composition, but Not Diversity, Shifts in Nodules of a Single Host Legume Across a 2-Million-Year Dune Chronosequence

  2018cites this paper
• Host investment into symbiosis varies among genotypes of the legume Acmispon strigosus, but host sanctions are uniform.

  2018cites this paper
• Legumes versus rhizobia: a model for ongoing conflict in symbiosis.

  2018cites this paper
• Dynamic genomic architecture of mutualistic cooperation in a wild population of Mesorhizobium

  2018cites this paper
• Phylogeny and Phylogeography of Rhizobial Symbionts Nodulating Legumes of the Tribe Genisteae

  2018influential citation
• Fitness variation among host species and the paradox of ineffective rhizobia

  2018cites this paper
• Invasive legumes can associate with many mutualists of native legumes, but usually do not

  2017influential citation
• The microbiology of lean and obese soil

  2017influential citation
• Soybeans inoculated with root zone soils of Canadian native legumes harbour diverse and novel Bradyrhizobium spp. that possess agricultural potential.

  2017cites this paper
• Assessment of bacterial communities of black soybean grown in fields

  2017cites this paper
• Metapopulation dominance and genomic-island acquisition of Bradyrhizobium with superior catabolic capabilities

  2016influential citation
• Nonnodulating Bradyrhizobium spp. Modulate the Benefits of Legume-Rhizobium Mutualism

  2016influential citation