Looking Inside Non-coding Chloroplast Regions of Calophyllum brasiliense (Calophyllaceae) to Understand Its Southernmost Population Distribution

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Journal of Plant Sciences

• Publication date

  2015-11-20

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.11648/J.JPS.20150306.14
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

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• Calophyllum brasiliense (Clusiaceae): Nuevo registro para la flora de la Argentina

  2009influential reference
• New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

  2009cited by this paper
• Plant phylogeography based on organelle genes: an introduction

  2007cited by this paper
• Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III.

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• Enhancements and modifications of primer design program Primer3

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  2005influential reference
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  2004cited by this paper
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  2004influential reference
• Chemical constituents of Calophyllum brasiliense. 2. Structure of three new coumarins and cancer chemopreventive activity of 4-substituted coumarins.

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• Inhibition of HIV-1 Reverse Transcriptase and HIV-1 Replication by Calophyllum Coumarins and Xanthones

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  2002cited by this paper
• Chemical constituents of Calophyllum brasiliensis: structure elucidation of seven new xanthones and their cancer chemopreventive activity.

  2002cited by this paper
• Biogeografía de América Latina y el Caribe

  2001influential reference
• Chloroplast microsatellites: new tools for studies in plant ecology and evolution.

  2001cited by this paper
• Genome walking with consensus primers: application to the large single copy region of chloroplast DNA

  2001cited by this paper
• A Greedy Algorithm for Aligning DNA Sequences

  2000cited by this paper
• Median-joining networks for inferring intraspecific phylogenies.

  1999cited by this paper
• BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT

  1999cited by this paper
• Isolation of Pinus radiata Genomic DNA Suitable for RAPD Analysis

  1998cited by this paper
• Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection.

  1997cited by this paper
• Optimal sequencing strategies for surveying molecular genetic diversity.

  1996cited by this paper
• Hairpins create minute inversions in non-coding regions of chloroplast DNA

  1996cited by this paper
• Estimation, variance and optimal sampling of gene diversity

  1995cited by this paper
• DnaSP, DNA sequence polymorphism: an interactive program for estimating population genetics parameters from DNA sequence data

  1995cited by this paper
• Estudos auto-ecologicos do guanandi (Calophyllum brasiliense Camb. Clusiacease) em uma mata ciliar do municipio de Brotas, SP

  1994cited by this paper
• Chloroplast DNA systematics: a review of methods and data analysis

  1994cited by this paper
• Defining 'Evolutionarily Significant Units' for conservation.

  1994cited by this paper
• Phylogenetics of seed plants : An analysis of nucleotide sequences from the plastid gene rbcL

  1993cited by this paper
• Universal primers for amplification of three non-coding regions of chloroplast DNA

  1991cited by this paper
• Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes.

  1991cited by this paper
• A comparison of methods for assessing genetic variation in plant conservation biology.

  1991cited by this paper
• Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

  1989cited by this paper
• Evolutionary Analysis of Plant DNA Sequences

  1987cited by this paper
• Molecular Evolutionary Genetics

  1987cited by this paper
• The dispersal centres of terrestrial vertebrates in the Neotropical realm. A study in the evolution of the Neotropical biota and its native landscapes.

  1973cited by this paper
• Patterns of evolutionary and geographical distribution in neotropical orchids

  1969cited by this paper

• Screening chloroplast regions in Calophyllum brasiliense (Calophyllaceae) for suitability for population genetic analyses

  2017cites this paper