Identification and Distribution of Anaerobic Responsive Elements (AREs) in Genes Functional Categorization of Arabidopsis thaliana

No abstract is available for this paper.

• Publication year

  2015

• Venue

  Journal of Applied Biotechnology Reports

• Publication date

  2015-01-21

• Fields of study

  Biology, Environmental Science

• Identifiers

  No identifiers available.

• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Regulatory TGACG-motif may elicit the secondary metabolite production through inhibition of active Cyclin-dependent kinase/Cyclin complex

  2012cited by this paper
• Making sense of low oxygen sensing.

  2012cited by this paper
• Predominant gain of promoter TATA box after gene duplication associated with stress responses.

  2011cited by this paper
• Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

  2011cited by this paper
• Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

  2011cited by this paper
• TC-motifs at the TATA-box expected position in plant genes: a novel class of motifs involved in the transcription regulation

  2010cited by this paper
• The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation

  2010cited by this paper
• Biochemical and molecular characterization of plant MYB transcription factor family

  2009cited by this paper
• Expression and localization of GhH6L, a putative classical arabinogalactan protein in cotton (Gossypium hirsutum).

  2009cited by this paper
• The primary signaling outputs of brassinosteroids are regulated by abscisic acid signaling

  2009cited by this paper
• Anaerobic metabolism in roots of Kentucky bluegrass in response to short-term waterlogging alone and in combination with high temperatures

  2008cited by this paper
• Role of ethylene in acclimations to promote oxygen transport in roots of plants in waterlogged soils

  2008cited by this paper
• An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance

  2008cited by this paper
• Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice

  2007cited by this paper
• A survey of DNA motif finding algorithms

  2007cited by this paper
• Positional bias of general and tissue-specific regulatory motifs in mouse gene promoters

  2007cited by this paper
• Evolution of motif variants and positional bias of the cyclic-AMP response element

  2007cited by this paper
• Detection and preliminary analysis of motifs in promoters of anaerobically induced genes of different plant species.

  2005influential reference
• Assessing computational tools for the discovery of transcription factor binding sites

  2005cited by this paper
• The MYB Transcription Factor Superfamily of Arabidopsis: Expression Analysis and Phylogenetic Comparison with the Rice MYB Family

  2005cited by this paper
• Evolution at Two Levels: On Genes and Form

  2005cited by this paper
• The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses.

  2005influential reference
• Transcription control reprogramming in genetic backup circuits

  2005cited by this paper
• Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters.

  2005cited by this paper
• Functional definition of ABA-response complexes: the promoter units necessary and sufficient for ABA induction of gene expression in barley (Hordeum vulgare L.)

  2004cited by this paper
• Predicting Gene Expression from Sequence require the simultaneous participation of many gene

  2004cited by this paper
• MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes.

  2004cited by this paper
• Two cis-acting elements necessary and sufficient for gibberellin-upregulated proteinase expression in rice seeds.

  2003cited by this paper
• Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) Function as Transcriptional Activators in Abscisic Acid Signaling Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.006130.

  2003cited by this paper
• Expression Profile Analysis of the Low-Oxygen Response in Arabidopsis Root Cultures Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.004747.

  2002cited by this paper
• Auxin-responsive gene expression: genes, promoters and regulatory factors

  2002cited by this paper
• PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences

  2002influential reference
• Near-neutrality in evolution of genes and gene regulation

  2002cited by this paper
• MYB transcription factors in Arabidopsis.

  2002cited by this paper
• Salt and drought stress signal transduction in plants.

  2002cited by this paper
• Molecular Basis of the Anaerobic Response in Plants

  2001cited by this paper
• Molecular Evidence for the Early Colonization of Land by Fungi and Plants

  2001cited by this paper
• TRANSFAC: an integrated system for gene expression regulation

  2000cited by this paper
• PLACE: a database of plant cis-acting regulatory DNA elements

  1998cited by this paper
• Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen.

  1998cited by this paper
• Differential Interactions of Promoter Elements in Stress Responses of the Arabidopsis Adh Gene

  1994cited by this paper
• The anaerobic responsive element contains two GC-rich sequences essential for binding a nuclear protein and hypoxic activation of the maize Adh1 promoter.

  1991influential reference
• The Story of O2

  1990cited by this paper
• DNA sequences required for anaerobic expression of the maize alcohol dehydrogenase 1 gene.

  1987influential reference
• The anaerobic proteins of maize.

  1980cited by this paper

• Molecular Characterization of HSF Genes in Ricinus Communis L.: A Foundation for Breeding Stress-Resilient Genotypes

  2026cites this paper
• Cloning and function analysis of ZmICE1a, a contributor to the melioration of maize kernel traits

  2025cites this paper
• Memory of Water Stress in Cotton (Gossypium Hirsutum L.): Evaluating Physiological Responses and Yield Stability

  2025cites this paper
• Genome-wide characterization of SINA E3 ubiquitin ligase family members and their expression profiles in response to various abiotic stresses and hormones in kiwifruit.

  2023cites this paper
• Epigenetic modifications and miRNAs determine the transition of somatic cells into somatic embryos

  2023cites this paper
• Consensus genomic regions associated with multiple abiotic stress tolerance in wheat and implications for wheat breeding

  2022cites this paper
• Genome-wide analysis of HSP90 gene family in the Mediterranean olive (Olea europaea subsp. europaea) provides insight into structural patterns, evolution and functional diversity

  2020cites this paper
• Co-regulation analysis of co-expressed modules under cold and pathogen stress conditions in tomato

  2018cites this paper
• Rice Seed Germination Underwater: Morpho-Physiological Responses and the Bases of Differential Expression of Alcoholic Fermentation Enzymes

  2017cites this paper