Auxin-responsive gene expression: genes, promoters and regulatory factors

No abstract is available for this paper.

• Publication year

  2002

• Venue

  Plant Molecular Biology

• Publication date

  2002-06-01

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1023/A:1015207114117PMID 12036261
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length.

  2008cited by this paper
• Auxin cross-talk: integration of signalling pathways to control plant development

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• The role of regulated protein degradation in auxin response

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• Genetics of Aux/IAA and ARF action in plant growth and development

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• Protein phosphorylation in the delivery of and response to auxin signals

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• Auxin Transport Promotes Arabidopsis Lateral Root Initiation

  2001cited by this paper
• Identification of Arabidopsis Histone Deacetylase HDA6 Mutants That Affect Transgene Expression

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• A role for flavin monooxygenase-like enzymes in auxin biosynthesis.

  2001cited by this paper
• IAA17/AXR3: Biochemical Insight into an Auxin Mutant Phenotype

  2001influential reference
• A Gain-of-Function Mutation in IAA28 Suppresses Lateral Root Development

  2001cited by this paper
• Aux/IAA proteins are phosphorylated by phytochrome in vitro.

  2000influential reference
• FIN219, an auxin-regulated gene, defines a link between phytochrome A and the downstream regulator COP1 in light control of Arabidopsis development.

  2000influential reference
• Auxin induces mitogenic activated protein kinase (MAPK) activation in roots of Arabidopsis seedlings.

  2000cited by this paper
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  2000cited by this paper
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  2000cited by this paper
• Functional analysis of oxidative stress-activated mitogen-activated protein kinase cascade in plants.

  2000cited by this paper
• Degradation of Aux/IAA proteins is essential for normal auxin signalling.

  2000influential reference
• Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development.

  2000cited by this paper
• Function of the ubiquitin-proteasome pathway in auxin response.

  2000cited by this paper
• The NPH4 Locus Encodes the Auxin Response Factor ARF7, a Conditional Regulator of Differential Growth in Aerial Arabidopsis Tissue

  2000cited by this paper
• Dimerization and DNA binding of auxin response factors.

  1999influential reference
• Activation and repression of transcription by auxin-response factors.

  1999influential reference
• RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants.

  1999cited by this paper
• Biochemical characterization of recombinant polypeptides corresponding to the predicted ²±± fold in Aux/IAA proteins

  1999influential reference
• Chapter 19 - Auxin-regulated genes and promoters

  1999influential reference
• An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root.

  1999cited by this paper
• Biochemistry and Molecular Biology of Plant Hormones

  1999cited by this paper
• The role of COP1 in repression of Arabidopsis photomorphogenic development.

  1999cited by this paper
• Auxin-induced K+ channel expression represents an essential step in coleoptile growth and gravitropism.

  1999influential reference
• Expression of the Auxin-Inducible GH3 Promoter/GUS Fusion Gene as a Useful Molecular Marker for Auxin Physiology

  1999cited by this paper
• Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene.

  1999cited by this paper
• Biochemical characterization of recombinant polypeptides corresponding to the predicted betaalphaalpha fold in Aux/IAA proteins.

  1999cited by this paper
• How does auxin turn on genes?

  1998influential reference
• Suppression of auxin signal transduction by a MAPK cascade in higher plants

  1998cited by this paper
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• Suppressors of an Arabidopsis thaliana phyB mutation identify genes that control light signaling and hypocotyl elongation.

  1998cited by this paper
• The ARF family of transcription factors and their role in plant hormone-responsive transcription

  1998influential reference
• Isolation and characterization of an auxin-inducible SAUR gene from radish seedlings.

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  1998influential reference
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• The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development

  1998cited by this paper
• Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements.

  1997influential reference
• Protein-protein interactions among the Aux/IAA proteins.

  1997influential reference
• Isolation by differential display and characterization of a tobacco auxin‐responsive cDNA Nt‐gh3, related to GH3

  1997cited by this paper
• Expression of auxin‐regulated genes

  1997cited by this paper
• ETTIN patterns the Arabidopsis floral meristem and reproductive organs.

  1997cited by this paper
• ARF1, a transcription factor that binds to auxin response elements.

  1997influential reference
• Early Genes and Auxin Action

  1996cited by this paper
• A polymorphic bipartite motif signals nuclear targeting of early auxin-inducible proteins related to PS-IAA4 from pea (Pisum sativum).

  1995cited by this paper
• The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana.

  1995influential reference
• ThePS-IAA4/5-like Family of Early Auxin-inducible mRNAs inArabidopsis thaliana

  1995influential reference
• The AXR1 and AUX1 genes of Arabidopsis function in separate auxin-response pathways.

  1995cited by this paper
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  1995cited by this paper
• Soybean GH3 promoter contains multiple auxin-inducible elements.

  1994cited by this paper
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  1994influential reference
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  1994influential reference
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  1994influential reference
• Auxin-Regulated Transcription

  1993cited by this paper
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  1990cited by this paper
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  1990influential reference
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  1989cited by this paper
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  1989influential reference
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  1987influential reference
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  1985influential reference
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  1985influential reference
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  1984influential reference
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  1982influential reference

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