Dead or alive? Viability assessment of micro- and mesoplankton

No abstract is available for this paper.

• Publication year

  2012

• Venue

  Journal of Plankton Research

• Publication date

  2012-06-01

• Fields of study

  Biology, Environmental Science

• Identifiers
  DOI 10.1093/PLANKT/FBS018
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar

• No claims are published for this paper.

• No concepts are published for this paper.

• Re-growth of potential invasive phytoplankton following UV-based ballast water treatment

  2012cited by this paper
• Determining the viability of marine protists using a combination of vital, fluorescent stains

  2011cited by this paper
• Effects of ultraviolet radiation on growth, cell death and the standing stock of Antarctic phytoplankton.

  2010cited by this paper
• Handbook of hydrocarbon and lipid microbiology

  2010cited by this paper
• Lethal Effects of Pulsed High-Voltage Discharge on Marine Plankton and Escherichia coli

  2010cited by this paper
• Assessing Ballast Water Treatments: Evaluation of Viability Methods for Ambient Freshwater Microplankton Assemblages

  2010influential reference
• Time to automate identification

  2010influential reference
• Phytoplankton Viability Assay for Oil Compounds in Water

  2010cited by this paper
• Development of a Method to Determine the Number of Viable Organisms or- 50 micrometers (Nominally Zooplankton) in Ships' Ballast Water: A Combination of Two Vital, Fluorescent Stains

  2010cited by this paper
• Phyto- and bacterioplankton abundance and viability and their relationship with phosphorus across the Mediterranean Sea

  2010cited by this paper
• Shipboard trials of an ozone-based ballast water treatment system.

  2010cited by this paper
• Zooplanktophagy in the natural diet and selectivity of the invasive mollusk Limnoperna fortunei

  2010cited by this paper
• Effect of dead phytoplankton cells on the apparent efficiency of photosystem II

  2009cited by this paper
• Simple staining method for differentiating live and dead marine zooplankton in field samples

  2009influential reference
• Use of aniline blue to distinguish live and dead crustacean zooplankton composition in freshwaters

  2009cited by this paper
• Differences in cell viabilities of phytoplankton between spring and late summer in the northwest Pacific Ocean

  2008cited by this paper
• Applications of digital holographic microscopes with partially spatial coherence sources

  2008cited by this paper
• Wanted: alive and not dead: functioning diatom status is a quality cue for the suspension-feeder Crassostrea gigas

  2008cited by this paper
• Extending the cell digestion assay to quantify dead phytoplankton cells in cold and polar waters

  2008cited by this paper
• Efficacy of three commercially available ballast water biocides against vegetative microalgae, dinoflagellate cysts and bacteria

  2007cited by this paper
• Cell death in three marine diatom species in response to different irradiance levels, silicate, or iron concentrations

  2007cited by this paper
• Confocal laser scanning microscopy: using cuticular autofluorescence for high resolution morphological imaging in small crustaceans

  2007cited by this paper
• Green Autofluorescence in Dinoflagellates, Diatoms, and Other Microalgae and Its Implications for Vital Staining and Morphological Studies

  2007cited by this paper
• Applicability of the FDA assay to determine the viability of marine phytoplankton under different environmental conditions

  2007cited by this paper
• Increased mortality and photoinhibition in the symbiotic dinoflagellates of the Indo–Pacific coral Stylophora pistillata (Esper) after summer bleaching

  2006cited by this paper
• Picophytoplankton cell death induced by UV radiation: Evidence for oceanic Atlantic communities

  2006cited by this paper
• Occurrence of copepod carcasses in the lower Chesapeake Bay and their decomposition by ambient microbes

  2006cited by this paper
• Rapid flow cytometric method for the assessment of toxic dinoflagellate cyst viability.

  2006cited by this paper
• Contrasting patterns of phytoplankton viability in the subtropical NE Atlantic Ocean

  2006cited by this paper
• Treatment of Ballast Water; How to Test a System with a Modular Concept?

  2006cited by this paper
• Cell death in lake phytoplankton communities

  2006cited by this paper
• Use of the FlowCAM for semi-automated recognition and enumeration of red tide cells (Karenia brevis) in natural plankton samples

  2006cited by this paper
• Seasonality of pico-phytoplankton abundance and cell death in a Mediterranean Bay (Bay of Palma, Majorca Island)

  2005influential reference
• Untersuchungen über vitale Färbung an Süßwassertieren, insbesondere bei Cladoceren

  2005cited by this paper
• GROWTH INHIBITION AND TOXICITY OF THE DIATOM ALDEHYDE 2‐TRANS, 4‐TRANS‐DECADIENAL ON THALASSIOSIRA WEISSFLOGII (BACILLARIOPHYCEAE) 1

  2005cited by this paper
• Update on the environmental and economic costs associated with alien-invasive species in the United States

  2005cited by this paper
• The Use of Aniline Blue for the Determination of Dead Phytoplankton, Zooplankton and Meroplankton in LC50 Testings After 96 Hours[[ellipsis]] A Re-Evaluation of the US Environmental Protection Agency Methodology

  2004cited by this paper
• Mortality in cultures of the dinoflagellate Amphidinium carterae during culture senescence and darkness

  2004cited by this paper
• Challenges in global ballast water management.

  2004cited by this paper
• Viability and niche segregation of Prochlorococcus and Synechococcus cells across the Central Atlantic Ocean

  2004influential reference
• Rapid assessment of copepod (Calanus helgolandicus) embryo viability using fluorescent probes

  2004cited by this paper
• Do experts make mistakes? A comparison of human and machine identification of dinoflagellates

  2003influential reference
• Study of non-consumptive mortality of Crustacean zooplankton in a Siberian reservoir using staining for live/dead sorting and sediment traps

  2003cited by this paper
• Marine invasive alien species: a threat to global biodiversity

  2003cited by this paper
• An automated high-throughput assay for survival of the nematode Caenorhabditis elegans.

  2003cited by this paper
• Cell viability in natural phytoplankton communities quantified by a membrane permeability probe

  2002influential reference
• The Use of Aniline Blue for the Determination of Dead Phytoplankton, Zooplankton and Meroplankton in LC50 Testings After 96 Hours: A Re-Evaluation of the US Environmental Protection Agency Methodology

  2002cited by this paper
• Flow cytometric analysis of phytoplankton viability following viral infection

  2001cited by this paper
• Cell death in phytoplankton: correlation between changes in membrane permeability, photosynthetic activity, pigmentation and growth

  2001influential reference
• Application of flow cytometry in marine phytoplankton research: current applications and future perspectives

  2000cited by this paper
• Mortality of zebra mussel, Dreissena polymorpha, veligers during downstream transport

  1999cited by this paper
• Improved three-dimensional imaging with a digital holography microscope with a source of partial spatial coherence.

  1999cited by this paper
• A new method for measuring soluble cellular organic content and a membrane property, Tm, of planktonic algae

  1998cited by this paper
• CELLULAR DNA CONTENT OF MARINE PHYTOPLANKTON USING TWO NEW FLUOROCHROMES: TAXONOMIC AND ECOLOGICAL IMPLICATIONS 1

  1997influential reference
• Bacterial viability and antibiotic susceptibility testing with SYTOX green nucleic acid stain

  1997cited by this paper
• Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (ghosts)

  1995cited by this paper
• Assays of cell viability: discrimination of cells dying by apoptosis.

  1994influential reference
• Ultrastructure and Neuronal Control of Luminous Cells in the Copepod Gaussia princeps.

  1991cited by this paper
• In vitro toxicity of various classes of test agents using the neutral red assay on a human three-dimensional physiologic skin model

  1991cited by this paper
• The role of heavy skeletons in vertical movements of non‐motile zooplankton

  1982cited by this paper
• Vital and mortal staining of algae in the presence of chlorine-produced oxidants

  1978influential reference
• An in situ study of the productivity and population dynamics of five freshwater planktonic diatom species

  1978cited by this paper
• The use of neutral red and Evans blue for live-dead determinations of marine plankton (with comments on the use of rotenone for inhibition of grazing).

  1974influential reference
• Vital staining to sort dead and live copepods1, 2, 3

  1972cited by this paper

• Aerosolisation of microalgae: unveiling dimethyl-sulfide emissions during bubbling

  2026cites this paper
• Rotifers as environmental indicators: perspectives based on sampling strategies

  2026cites this paper
• Effects of UV-LED irradiation on decapod crustacean larval mortality, motility, and respiration: Implications for ballast water treatments and invasive species management.

  2026cites this paper
• Monitoring C. vulgaris Cultivations Grown on Winery Wastewater Using Flow Cytometry

  2025cites this paper
• The modified artificial cohort method for three dominant pelagic copepods in the northern North Pacific revealed species-specific differences in the optimum temperature

  2024cites this paper
• Biological testing of ships’ ballast water indicates challenges for the implementation of the Ballast Water Management Convention

  2024cites this paper
• Mortality of mesozooplankton in an acidified ocean: Investigating the impact of shallow hydrothermal vents across multiple monsoonal periods.

  2024cites this paper
• Function of maxillipeds and first oostegites in bopyrid isopods inferred from behavioural observations of Bopyrus crangorum infesting Palaemon serrifer

  2024cites this paper
• Staining to machine learning: An emerging technology for determination of microalgal cell viability

  2024influential citation
• The Effect of Different Surfactants and Polyelectrolytes on Nano-Vesiculation of Artificial and Cellular Membranes

  2024influential citation
• Aerosolization flux, bio-products, and dispersal capacities in the freshwater microalga Limnomonas gaiensis (Chlorophyceae)

  2023cites this paper
• Quantitative Viability Assessment of Microalgae for Advanced Wastewater Treatment by Flow Cytometry

  2023cites this paper
• Physiological and molecular insights into adaptive evolution of the marine model diatom Phaeodactylum tricornutum under low-pH stress

  2023cites this paper
• Microplate-Based Cell Viability Assay as a Cost-Effective Alternative to Flow Cytometry for Microalgae Analysis.

  2023cites this paper
• Transcriptome Analysis Revealed the Advantages of Room Temperature Preservation of Concentrated Oocystis borgei Cultures for Use in Aquaculture

  2023cites this paper
• Biomarkers of pollution by glyphosate in the lichens, Parmotrema tinctorium and Usnea barbata.

  2023cites this paper
• Inherent lack of CMFDA/FDA staining in certain algae and its implication for ballast water testing.

  2023cites this paper
• Metabarcoding reveals the differential sensitivity of planktonic microbiome to environmental filtering and biointeraction in Sansha Yongle blue hole

  2022cites this paper
• Survival and recovery of planktonic organisms in prolonged darkness and their implications on ballast water management

  2022cites this paper
• Optimal Nitrate Supplementation in Phaeodactylum tricornutum Culture Medium Increases Biomass and Fucoxanthin Production

  2022cites this paper
• Vertical occurrence of copepod carcasses in the Cosmonaut Sea during austral summer

  2022cites this paper
• Crude oil exposure reduces ice algal growth in a sea-ice 1 mesocosm experiment

  2022cites this paper
• Characterizing the Status of Energetic Metabolism of Dinoflagellate Resting Cysts under Mock Conditions of Marine Sediments via Physiological and Transcriptional Measurements

  2022cites this paper
• Impacts of Cd Pollution on the Vitality, Anatomy and Physiology of Two Morphologically Different Lichen Species of the Genera Parmotrema and Usnea, Evaluated under Experimental Conditions

  2022cites this paper
• Probing the Energetic Metabolism of Resting Cysts under Different Conditions from Molecular and Physiological Perspectives in the Harmful Algal Blooms-Forming Dinoflagellate Scrippsiella trochoidea

  2021cites this paper
• Principles of collection and plankton sample handling from ballast tanks to assess the efficiency of ship ballast water treatment systems

  2021cites this paper
• Concurrent assessment of water parameters and vital-based zooplankton community in an industrial harbor

  2021cites this paper
• Using zooplankton metabarcoding to assess the efficacy of different techniques to clean-up an oil-spill in a boreal lake.

  2021cites this paper
• Crude oil exposure reduces ice algal growth in a sea-ice mesocosm experiment

  2021cites this paper
• Examining bivalve fecundity: oocyte viability revealed by Neutral Red vital staining

  2021cites this paper
• Applying model approaches in non-model systems: A review and case study on coral cell culture

  2021cites this paper
• Synthetic Biomimetic Polymethacrylates: Promising Platform for the Design of Anti-Cyanobacterial and Anti-Algal Agents

  2021cites this paper
• A lipophilic cation protects crops against fungal pathogens by multiple modes of action

  2020cites this paper
• UV-C as a Pre-treatment Option against Microalgae in Drinking Water Facilities

  2020cites this paper
• Classification of dead and living microalgae Chlorella vulgaris by bioimage informatics and machine learning

  2020cites this paper
• Analysis of Microbial Cell Viability in a Liquid Using an Acoustic Sensor.

  2020cites this paper
• A phosphorescent iridium complex as a probe for diatom cells’ viability

  2020cites this paper
• Cell death in individual freshwater phytoplankton species: relationships with population dynamics and environmental factors

  2019cites this paper
• Dead heat: Copepod carcass occurrence along the Japanese coasts and implications for 240 a warming ocean 241

  2019cites this paper
• Differential cell viability in Nitzschia palea on exposure to different organic and inorganic environmental effluents

  2019cites this paper
• Copepod carcasses in the subtropical convergence zone of the Sargasso Sea: implications for microbial community composition, system respiration and carbon flux

  2019cites this paper
• Flow Cytometry as a Method to Study Marine Unicellular Algae: Development, Problems, and Prospects

  2019cites this paper
• Dead heat: copepod carcass occurrence along the Japanese coasts and implications for a warming ocean

  2019cites this paper
• Automatic Identification of Algae using Low-cost Multispectral Fluorescence Digital Microscopy, Hierarchical Classification & Deep Learning

  2019cites this paper
• Sargasso Sea 1 2 Copepod carcasses in the Subtropical Convergence Zone of the Sargasso Sea : Implications for 3 microbial community composition , system respiration and carbon flux 4 5

  2019cites this paper
• Use of luminometry and flow cytometry for evaluating the effects of cryoprotectants in the gorgonian coral endosymbiont Symbiodinium

  2019cites this paper
• Applicability of propidium monoazide (PMA) for discrimination between living and dead phytoplankton cells

  2019cites this paper
• Comparing flow cytometry and microscopy in the quantification of vital aquatic organisms in ballast water

  2018cites this paper
• Effects of turbulence exposure on zebra mussel (Dreissena polymorpha) larval survival

  2018cites this paper
• Zooplankton sensitivity and phytoplankton regrowth for ballast water treatment with advanced oxidation processes

  2018cites this paper
• Simulation experiments to elucidate variable fluorescence as a potential proxy for bulk microalgal viability from natural water, sediments and biofilms: Implication in ships ballast water management.

  2018cites this paper
• The Biological Basis for Ballast Water Performance Standards: "Viable/Non-Viable" or "Live/Dead"?

  2018cites this paper
• Branched Poly(ethylene imine)s as Anti-algal and Anti-cyanobacterial Agents with Selective Flocculation Behavior to Cyanobacteria over Algae.

  2018cites this paper
• Photocatalytic inactivation of microalgae: efficacy and cell damage evaluation by growth curves modeling

  2018cites this paper
• Comparison of mesozooplankton mortality impacted by the cooling systems of two nuclear power plants at the northern Taiwan coast, southern East China Sea.

  2018cites this paper
• Quantitative framework for validating two methodologies that are used to enumerate viable organisms for type approval of ballast water management systems.

  2018cites this paper
• Application of Aggregation-Induced Emission Fluorogens for Detection and Quantification of Toxic Chemicals in Small Aquatic Organisms

  2018cites this paper
• Evaluation of three methods for biomass estimation in small invertebrates, using three large disparate parasite species as model organisms

  2018cites this paper
• UV

  2018influential citation
• Chlorination induced damage and recovery in marine diatoms: Assay by SYTOX® Green staining.

  2017cites this paper
• Which Ballast Water Management System Will You Put Aboard? Remnant Anxieties: A Mini-Review

  2017cites this paper
• Wanted dead or alive? Using metabarcoding of environmental DNA and RNA to distinguish living assemblages for biosecurity applications

  2017cites this paper
• The role of egg cannibalism for the Calanus succession in the Disko Bay, Western Greenland

  2017cites this paper
• Enumerating viable phytoplankton using a culture-based Most Probable Number assay following ultraviolet-C treatment

  2017cites this paper
• Cryopreservation studies of an artificial co-culture between the cobalamin-requiring green alga Lobomonas rostrata and the bacterium Mesorhizobium loti

  2017cites this paper
• Mechanisms and Characterization of Trichoderma longibrachiatum T6 in Suppressing Nematodes (Heterodera avenae) in Wheat

  2017cites this paper
• Transcriptional Regulation of Cellulose Biosynthesis during the Early Phase of Nitrogen Deprivation in Nannochloropsis salina

  2017cites this paper
• Development of an ATP assay for rapid onboard testing to detect living microorganisms in ballast water

  2017cites this paper
• The challenges and promises of genetic approaches for ballast water management

  2017cites this paper
• Non-predatory mortality in Mediterranean coastal copepods

  2017cites this paper
• Examination of a high resolution laser optical plankton counter and FlowCAM for measuring plankton concentration and size

  2017cites this paper
• Avoiding quantification bias in metabarcoding: Application of a cell biovolume correction factor in diatom molecular biomonitoring

  2017cites this paper
• Non-predatory mortality in Mediterranean coastal copepods

  2017cites this paper
• Assessment of imaging-in-flow system (FlowCAM) for systematic ballast water management.

  2017cites this paper
• An estimate of the percentage of non-predatory dead variability in coastal zooplankton of the southern Humboldt Current System.

  2017cites this paper
• Characteristics of environmental condition and planktonic organisms in ship`s ballast water originating from international ports of Japan

  2016cites this paper
• Classification of phytoplankton cells as live or dead using the vital stains fluorescein diacetate and 5‐chloromethylfluorescein diacetate

  2016cites this paper
• Cell viability, pigments and photosynthetic performance of Arctic phytoplankton in contrasting ice-covered and open-water conditions during the spring-summer transition

  2016cites this paper
• Evaporation-induced stimulation of bacterial osmoregulation for electrical assessment of cell viability

  2016cites this paper
• Efficiency of Neutral Red, Evans Blue and MTT to assess viability of the freshwater microalgae Desmodesmus communis and Pediastrum boryanum

  2016cites this paper
• Surface metabolites of the brown alga Taonia atomaria have the ability to regulate epibiosis

  2016cites this paper
• Numerical comparison of scalar and vector methods of digital hologram compression

  2016cites this paper
• On the use of the serial dilution culture method to enumerate viable phytoplankton in natural communities of plankton subjected to ballast water treatment

  2015influential citation
• A staining method to determine marine microplanktonic organism viability and investigate the efficacy of a ship's ballast water treatment system

  2015cites this paper
• Putative involvement of adrenergic receptors in regulation of mussel (Perna canaliculus) larval settlement

  2015cites this paper
• Establishing benchmarks in compliance assessment for the ballast water management convention by port state control

  2015cites this paper
• Photosymbiosis in Marine Planktonic Protists

  2015cites this paper
• Flow cytometric applicability to evaluate UV inactivation of phytoplankton in marine water samples.

  2015cites this paper
• Evaluation of the utility of six measures for algal (Microcystis aeruginosa, Planktothrix agardhii and Pseudokirchneriella subcapitata) viability.

  2015cites this paper
• Quantifying indicatively living phytoplankton cells in ballast water samples--recommendations for Port State Control.

  2015cites this paper
• Aggregation-induced emission fluorogens as biomarkers to assess the viability of microalgae in aquatic ecosystems.

  2015cites this paper
• ROLE OF ALKALIS IN FLOCCULATION AND VIABILITY OF MICROALGAE TETRASELMIS SUECICA

  2015cites this paper
• Physiological changes of the lichen Parmotrema tinctorum as result of carbon nanotubes exposition.

  2015cites this paper
• Responses of Target and Non-target Species to Algaecide Exposures

  2014cites this paper
• Avaliação de corantes para a detecção da viabilidade do fitoplâncton marinho

  2014influential citation
• Responses of Planktothrix agardhii and Pseudokirchneriella subcapitata to Copper Sulfate (CuSO4 · 5H2O) and a Chelated Copper Compound (Cutrine®-Ultra)

  2014cites this paper
• Application of modern fluorescence techniques in studying growth, viability and phosphatase production of phytoplankton

  2014cites this paper
• Fluorescent fingerprints of endolithic phototrophic cyanobacteria living within 2

  2014cites this paper
• Use of Neutral Red in short-term sediment traps to distinguish between zooplankton swimmers and carcasses

  2014cites this paper
• Application of Neutral Red Staining Method to Distinguishing Live and Dead Marine Plankton for the Investigation of Efficacy of Ship’s Ballast Water Treatment System

  2014cites this paper