Fluctuation theorem applied to F1-ATPase.

No abstract is available for this paper.

• Publication year

  2010

• Venue

  Physical Review Letters

• Publication date

  2010-05-28

• Fields of study

  Medicine, Physics, Chemistry

• Identifiers
  DOI 10.1016/J.BPJ.2009.12.3466PMID 20867140
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Bacterial flagellar motor

  2008cited by this paper
• Cooperative three-step motions in catalytic subunits of F1-ATPase correlate with 80° and 40° substep rotations

  2008cited by this paper
• Nonequilibrium Mechanics of Active Cytoskeletal Networks

  2007cited by this paper
• Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies

  2005cited by this paper
• One rotary mechanism for F1-ATPase over ATP concentrations from millimolar down to nanomolar.

  2005cited by this paper
• Rotation scheme of V1-motor is different from that of F1-motor.

  2005cited by this paper
• Equality connecting energy dissipation with a violation of the fluctuation-response relation.

  2005cited by this paper
• Fluidized granular medium as an instance of the fluctuation theorem.

  2003cited by this paper
• Catalysis and rotation of F1 motor: Cleavage of ATP at the catalytic site occurs in 1 ms before 40° substep rotation

  2003cited by this paper
• Experimental demonstration of violations of the second law of thermodynamics for small systems and short time scales.

  2002cited by this paper
• Equilibrium Information from Nonequilibrium Measurements in an Experimental Test of Jarzynski's Equality

  2002cited by this paper
• Purine but Not Pyrimidine Nucleotides Support Rotation of F1-ATPase*

  2001cited by this paper
• Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase

  2001cited by this paper
• Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: angular torque profile of the enzyme.

  2001cited by this paper
• Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase

  2001cited by this paper
• Energy transduction in the F1 motor of ATP synthase

  1998cited by this paper
• F1-ATPase is a highly efficient molecular motor that rotates with discrete 120 degree steps.

  1998cited by this paper
• Direct observation of the rotation of F1-ATPase

  1997cited by this paper
• Probability of second law violations in shearing steady states.

  1993cited by this paper

• Recover a long-missing thermodynamic limit from experimental trajectories of F1-ATPase molecular motor.

  2026cites this paper
• The molecular mechanism of ATP synthase constrains the evolutionary landscape of chemiosmosis

  2025cites this paper
• Mapping Local Dissipation and Entropy Production in Complex and Active Fluids

  2025cites this paper
• Multiple kinesins speed up cargo transport in crowded environments by sharing load

  2025cites this paper
• The Crooks relationship in single molecule pulling simulations of coupled harmonic oscillators

  2025cites this paper
• Thermodynamic inference in molecular motors: A martingale approach.

  2025cites this paper
• Lyapunov spectra and fluctuation relations: Insights from the Galerkin-truncated Burgers equation.

  2024cites this paper
• Visualizing Single V-ATPase Rotation Using Janus Nanoparticles

  2024cites this paper
• Transfer entropy and flow of information in two-skyrmion system

  2024cites this paper
• Harnessing Information Thermodynamics: Conversion of DNA Information into Mechanical Work in RNA Transcription and Nanopore Sequencing

  2024cites this paper
• General theory for localizing the where and when of entropy production meets single-molecule experiments

  2024influential citation
• Inferring entropy production from time-dependent moments

  2023cites this paper
• On a thermodynamic foundation of Eyring rate theory for plastic deformation of polymer solids

  2023cites this paper
• Work distribution of a colloid in an elongational flow field and under Ornstein-Uhlenbeck noise.

  2023cites this paper
• Waiting Time Distributions in Hybrid Models of Motor–Bead Assays: A Concept and Tool for Inference

  2023cites this paper
• RNA polymerase is a molecular motor that converts its transcribing genetic information to free energy for its movement

  2023cites this paper
• How Does F1-ATPase Generate Torque?: Analysis From Cryo-Electron Microscopy and Rotational Catalysis of Thermophilic F1

  2022cites this paper
• Designing, Synthesizing and Modeling Active Fluids

  2022cites this paper
• White-noise fluctuation theorem for Langevin dynamics

  2022cites this paper
• Direct identification of the rotary angle of ATP cleavage in F1-ATPase from Bacillus PS3.

  2022cites this paper
• Nanometer-Resolution Long-term Tracking of Single Cargos Reveals Dynein Motor Mechanisms

  2022cites this paper
• Rotations of F-ATPase and V-ATPase analyzed by a torque approach

  2022influential citation
• Singular optimal driving cycles of stochastic pumps

  2022cites this paper
• The Measurement of Information and Free Energy in Mechanical-Force-Driven Coil-Globule Transitions.

  2021cites this paper
• Cycle counts and affinities in stochastic models of nonequilibrium systems.

  2021cites this paper
• Inducing and optimizing Markovian Mpemba effect with stochastic reset

  2021cites this paper
• Work fluctuation relation of an active Brownian particle in a viscoelastic fluid.

  2021cites this paper
• Intracellular force comparison of pathogenic KIF 1 A , KIF 5 , and dynein by fluctuation analysis Running title : Force comparison of microtubule motors

  2021cites this paper
• Internal energy and information flows mediate input and output power in bipartite molecular machines.

  2021cites this paper
• Tight Chemomechanical Coupling of the F1 Motor Relies on Structural Stability.

  2020cites this paper
• The 3 × 120° rotary mechanism of Paracoccus denitrificans F1-ATPase is different from that of the bacterial and mitochondrial F1-ATPases

  2020cites this paper
• Experimental evaluation of thermodynamic cost and speed limit in living cells via information geometry

  2020cites this paper
• Entropy production in model colloidal suspensions under shear via the fluctuation theorem.

  2020cites this paper
• Entropy production estimation with optimal current.

  2020cites this paper
• Faster Uphill Relaxation in Thermodynamically Equidistant Temperature Quenches.

  2020cites this paper
• On the accurate estimation of free energies using the jarzynski equality

  2019cites this paper
• Free energy and information-content measurements in thermodynamic and molecular ensembles

  2019cites this paper
• Supplementary Information for Method to extract multiple states in F 1 -ATPase rotation experiments from jump distributions

  2019cites this paper
• Nonequilibrium driven by an external torque in the presence of a magnetic field.

  2019cites this paper
• Application of the fluctuation theorem to motor proteins: from F1-ATPase to axonal cargo transport by kinesin and dynein

  2018cites this paper
• Equilibrium free energies from non-equilibrium trajectories with relaxation fluctuation spectroscopy

  2018cites this paper
• Effects of non-equilibrium angle fluctuation on F1-ATPase kinetics induced by temperature increase.

  2018cites this paper
• Non-invasive force measurement reveals the number of active kinesins on a synaptic vesicle precursor in axonal transport regulated by ARL-8.

  2018cites this paper
• Single-molecule imaging and manipulation of biomolecular machines and systems.

  2018cites this paper
• Stochastic Time Evolution, Information Geometry, and the Cramér-Rao Bound

  2018cites this paper
• Equilibrium free energies from non-equilibrium trajectories with relaxation fluctuation spectroscopy

  2018cites this paper
• The effects of non-equilibrium angle fluctuation on rotary protein motor kinetics: numerical study with a data driven model [an abstract of dissertation and a summary of dissertation review]

  2018cites this paper
• Experiments in Stochastic Thermodynamics: Short History and Perspectives

  2017cites this paper
• Applying fluctuation theorem on position fluctuations of an intruder penetrating a 2D wet granular medium near jamming state

  2017cites this paper
• Broken detailed balance and non-equilibrium dynamics in living systems: a review

  2017cites this paper
• Rotational Brownian Motion: Trajectory, Reversibility and Stochastic Entropy

  2017cites this paper
• Application of the fluctuation theorem for noninvasive force measurement in living neuronal axons

  2017cites this paper
• Rotational Brownian Motion: Trajectory, Reversibility and Stochastic Entropy

  2017cites this paper
• Catalytic robustness and torque generation of the F1-ATPase

  2017cites this paper
• Rotation Measurements of Tethered Cells.

  2017cites this paper
• A computational study of energy conversion efficiency of F1-ATPase

  2017cites this paper
• Torque generation through the random movement of an asymmetric rotor: A potential rotational mechanism of the γ subunit of F(1)-ATPase.

  2016cites this paper
• Introduction to Information Thermodynamics on Causal Networks

  2016cites this paper
• Biophysical Characterization of a Thermoalkaliphilic Molecular Motor with a High Stepping Torque Gives Insight into Evolutionary ATP Synthase Adaptation*

  2016influential citation
• Entropy production by active particles: Coupling of odd and even functions of velocity.

  2016cites this paper
• Inferring dissipation from current fluctuations

  2016cites this paper
• F1 rotary motor of ATP synthase is driven by the torsionally-asymmetric drive shaft

  2016cites this paper
• Molecular dynamics on nonequilibrium motion of a colloidal particle driven by an external torque

  2016cites this paper
• Stochastic Thermodynamics for Small System

  2016cites this paper
• Giant enhancement of fluctuation in small biological systems under external fields

  2016cites this paper
• Iterative control strategies for nonlinear systems.

  2016cites this paper
• Non-equilibrium Statistical Theory for Singular Fluid Stresses

  2016cites this paper
• Statistics of Infima and Stopping Times of Entropy Production and Applications to Active Molecular Processes

  2016cites this paper
• Dissecting the role of the γ-subunit in the rotary–chemical coupling and torque generation of F1-ATPase

  2015cites this paper
• Universal bounds on current fluctuations.

  2015cites this paper
• Key chemical factors of arginine finger catalysis of F1-ATPase clarified by an unnatural amino acid mutation.

  2015cites this paper
• Effects of an ATP analogue, adenosine 5'-[α-thio]-triphosphate, on F1-ATPase rotary catalysis, torque generation, and inhibited intermediated formation.

  2015cites this paper
• From free energy measurements to thermodynamic inference in nonequilibrium small systems

  2015cites this paper
• Nonequilibrium fluctuations for a single-particle analog of gas in a soft wall.

  2015cites this paper
• Simple mechanism whereby the F1-ATPase motor rotates with near-perfect chemomechanical energy conversion

  2015cites this paper
• Anomalous free energy changes induced by topology.

  2015cites this paper
• Nonequilibrium Fluctuations in Biological Strands, Machines, and Cells

  2015cites this paper
• Dynamics and thermodynamics of molecular motor-cargo systems

  2015influential citation
• Stochastic thermodynamics of macrospins with fluctuating amplitude and direction.

  2015cites this paper
• Effective rates from thermodynamically consistent coarse-graining of models for molecular motors with probe particles.

  2015cites this paper
• Information Flow and Entropy Production on Bayesian Networks

  2015cites this paper
• Non-equilibrium work distribution for interacting colloidal particles under friction

  2015cites this paper
• Bier-Astumian relation, fluctuation theorem and their possible applications

  2015cites this paper
• High-speed angle-resolved imaging of a single gold nanorod with microsecond temporal resolution and one-degree angle precision.

  2015cites this paper
• Performance Estimation for Two-Dimensional Brownian Rotary Ratchet Systems

  2015cites this paper
• Path-dependent entropy production

  2015cites this paper
• Rotational mechanism of Enterococcus hirae V1-ATPase by crystal-structure and single-molecule analyses.

  2015cites this paper
• Torque transmission mechanism via DELSEED loop of F1-ATPase.

  2015cites this paper
• Active Brownian particles: entropy production and fluctuation response.

  2014cites this paper
• Fluctuation theorem for partially masked nonequilibrium dynamics.

  2014cites this paper
• Concepts, Challenges, and Successes in Modeling Thermodynamics of Metabolism

  2014cites this paper
• Minimal model of stochastic athermal systems: origin of non-Gaussian noise.

  2014cites this paper
• Fine-structured large deviations and the fluctuation theorem: Molecular motors and beyond

  2014cites this paper
• F-subunit reinforces torque generation in V-ATPase

  2014cites this paper
• Macrospin in external magnetic field: entropy production and fluctuation theorems

  2014cites this paper
• Glycine Induces Bidirectional Modifications in N-Methyl-d-aspartate Receptor-mediated Synaptic Responses in Hippocampal CA1 Neurons*

  2014cites this paper
• Torque Generation of Enterococcus hirae V-ATPase*

  2014cites this paper
• Improved predictions of rare events using the Crooks fluctuation theorem.

  2014cites this paper
• Maxwell's demon in biochemical signal transduction with feedback loop

  2014cites this paper
• Robustness of the Rotary Catalysis Mechanism of F1-ATPase*

  2014cites this paper