Isolation and characterization of low nucleic acid (LNA)-content bacteria

No abstract is available for this paper.

• Publication year

  2009

• Venue

  The ISME Journal

• Publication date

  2009-05-07

• Fields of study

  Biology, Medicine, Environmental Science

• Identifiers
  DOI 10.1038/ismej.2009.46PMID 19421234
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Escherichia coli O157

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  2008influential reference
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  2007influential reference
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• The uncultured microbial majority.

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