Imaging human connectomes at the macroscale

No abstract is available for this paper.

• Publication year

  2013

• Venue

  Nature Methods

• Publication date

  2013-05-30

• Fields of study

  Biology, Medicine, Computer Science

• Identifiers
  DOI 10.1038/nmeth.2482PMID 23722212PMCID PMC4096321
• External record

  Open on Semantic Scholar

• Source metadata

  Semantic Scholar, PubMed

• No claims are published for this paper.

• No concepts are published for this paper.

• Removing motion and physiological artifacts from intrinsic BOLD fluctuations using short echo data

  2013cited by this paper
• Cortical Signatures of Dyslexia and Remediation: An Intrinsic Functional Connectivity Approach

  2013cited by this paper
• The extrinsic and intrinsic functional architectures of the human brain are not equivalent.

  2013cited by this paper
• Brainnetome: A new -ome to understand the brain and its disorders

  2013cited by this paper
• Perceptual plasticity is mediated by connectivity changes of the medial thalamic nucleus

  2013cited by this paper
• An improved framework for confound regression and filtering for control of motion artifact in the preprocessing of resting-state functional connectivity data

  2013cited by this paper
• A comprehensive assessment of regional variation in the impact of head micromovements on functional connectomics

  2013cited by this paper
• Learning and comparing functional connectomes across subjects

  2013cited by this paper
• Making data sharing work: The FCP/INDI experience

  2013cited by this paper
• White matter integrity, fiber count, and other fallacies: The do's and don'ts of diffusion MRI

  2013cited by this paper
• Effects of image reconstruction on fiber orientation mapping from multichannel diffusion MRI: Reducing the noise floor using SENSE

  2013cited by this paper
• Multiple Fibers: Beyond the Diffusion Tensor

  2013cited by this paper
• Temporally-independent functional modes of spontaneous brain activity

  2012cited by this paper
• The influence of head motion on intrinsic functional connectivity MRI

  2012cited by this paper
• Mapping Connectivity Damage in the Case of Phineas Gage

  2012cited by this paper
• Improving diffusion MRI using simultaneous multi-slice echo planar imaging

  2012cited by this paper
• Trouble at Rest: How Correlation Patterns and Group Differences Become Distorted After Global Signal Regression

  2012cited by this paper
• Investigating Effective Brain Connectivity from fMRI Data: Past Findings and Current Issues with Reference to Granger Causality Analysis

  2012cited by this paper
• Staining and embedding the whole mouse brain for electron microscopy

  2012cited by this paper
• Brain Connectivity in Disorders of Consciousness

  2012cited by this paper
• Why has it taken so long for biological psychiatry to develop clinical tests and what to do about it?

  2012cited by this paper
• Modelling with independent components

  2012cited by this paper
• Impact of in-scanner head motion on multiple measures of functional connectivity: Relevance for studies of neurodevelopment in youth

  2012cited by this paper
• Critical comments on dynamic causal modelling

  2012cited by this paper
• The role of physiological noise in resting-state functional connectivity

  2012cited by this paper
• Characterizing variation in the functional connectome: promise and pitfalls.

  2012cited by this paper
• Human connectomics.

  2012cited by this paper
• Network centrality in the human functional connectome.

  2012cited by this paper
• A whole brain fMRI atlas generated via spatially constrained spectral clustering

  2012cited by this paper
• Alterations of multiple resting state network connectivity in physiological, pharmacological, and pathological consciousness states

  2012cited by this paper
• Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion

  2012cited by this paper
• Efficacy of transcranial magnetic stimulation targets for depression is related to intrinsic functional connectivity with the subgenual cingulate.

  2012cited by this paper
• On Variability and Genes: Inter-individual Differences in Auditory Brain Function

  2012cited by this paper
• Resting State Networks and Consciousness

  2012cited by this paper
• Network modelling methods for FMRI

  2011cited by this paper
• Tractography: Where Do We Go from Here?

  2011cited by this paper
• Dynamic causal modeling and Granger causality Comments on: The identification of interacting networks in the brain using fMRI: Model selection, causality and deconvolution

  2011cited by this paper
• Spectral characteristics of resting state networks.

  2011cited by this paper
• Brain graphs: graphical models of the human brain connectome.

  2011cited by this paper
• Empirical Evaluations of Slice-Timing, Smoothing, and Normalization Effects in Seed-Based, Resting-State Functional Magnetic Resonance Imaging Analyses

  2011cited by this paper
• Temporal scaling properties and spatial synchronization of spontaneous blood oxygenation level‐dependent (BOLD) signal fluctuations in rat sensorimotor network at different levels of isoflurane anesthesia

  2011cited by this paper
• Repeated pain induces adaptations of intrinsic brain activity to reflect past and predict future pain

  2011cited by this paper
• Physiological noise effects on the flip angle selection in BOLD fMRI

  2011cited by this paper
• Decoding brain states from fMRI connectivity graphs

  2011cited by this paper
• Robust Reproducible Resting State Networks in the Awake Rodent Brain

  2011cited by this paper
• Prefrontal Transcranial Direct Current Stimulation Changes Connectivity of Resting-State Networks during fMRI

  2011cited by this paper
• Mapping sources of correlation in resting state FMRI, with artifact detection and removal

  2010cited by this paper
• Network-based statistic: Identifying differences in brain networks

  2010cited by this paper
• Multiband multislice GE‐EPI at 7 tesla, with 16‐fold acceleration using partial parallel imaging with application to high spatial and temporal whole‐brain fMRI

  2010cited by this paper
• A group model for stable multi-subject ICA on fMRI datasets

  2010cited by this paper
• Functional connectivity of the temporo-parietal region in schizophrenia: effects of rTMS treatment of auditory hallucinations.

  2010cited by this paper
• Neural basis of global resting-state fMRI activity

  2010cited by this paper
• Enhanced brain correlations during rest are related to memory for recent experiences.

  2010cited by this paper
• Prediction of Individual Brain Maturity Using fMRI

  2010cited by this paper
• False Discovery Rate Control With Groups

  2010cited by this paper
• Correlated low-frequency BOLD fluctuations in the resting human brain are modulated by recent experience in category-preferential visual regions.

  2010cited by this paper
• Complex network measures of brain connectivity: Uses and interpretations

  2010cited by this paper
• Development of a Large-Scale Functional Brain Network during Human Non-Rapid Eye Movement Sleep

  2010cited by this paper
• Toward discovery science of human brain function

  2010cited by this paper
• Multiplexed Echo Planar Imaging for Sub-Second Whole Brain FMRI and Fast Diffusion Imaging

  2010cited by this paper
• Challenges and limitations of quantifying brain connectivity in vivo with diffusion MRI

  2010cited by this paper
• Precuneus shares intrinsic functional architecture in humans and monkeys

  2009cited by this paper
• The global signal and observed anticorrelated resting state brain networks.

  2009cited by this paper
• Gyri-precise head model of transcranial direct current stimulation: improved spatial focality using a ring electrode versus conventional rectangular pad.

  2009cited by this paper
• A protocol for use of medetomidine anesthesia in rats for extended studies using task-induced BOLD contrast and resting-state functional connectivity

  2009cited by this paper
• Correspondence of the brain's functional architecture during activation and rest

  2009cited by this paper
• Connectivity-Based Parcellation of Human Cingulate Cortex and Its Relation to Functional Specialization

  2009cited by this paper
• Decoupling of the brain's default mode network during deep sleep

  2009cited by this paper
• The impact of global signal regression on resting state correlations: Are anti-correlated networks introduced?

  2009cited by this paper
• The B‐matrix must be rotated when correcting for subject motion in DTI data

  2009cited by this paper
• Learning sculpts the spontaneous activity of the resting human brain

  2009cited by this paper
• Diffusion MRI: From Quantitative Measurement to In vivo Neuroanatomy

  2009cited by this paper
• Disease state prediction from resting state functional connectivity

  2009cited by this paper
• The effects of physiologically plausible connectivity structure on local and global dynamics in large scale brain models.

  2009cited by this paper
• Functional segmentation of the brain cortex using high model order group PICA

  2009cited by this paper
• Chapter 15 – MR Diffusion Tractography

  2009cited by this paper
• MR Diffusion Tractography

  2009cited by this paper
• Complex brain networks: graph theoretical analysis of structural and functional systems

  2009cited by this paper
• Axcaliber: A method for measuring axon diameter distribution from diffusion MRI

  2008cited by this paper
• A critical role for the right fronto-insular cortex in switching between central-executive and default-mode networks

  2008cited by this paper
• Identifying Neural Drivers with Functional MRI: An Electrophysiological Validation

  2008cited by this paper
• Functional coactivation map of the human brain.

  2008cited by this paper
• High temporal resolution functional MRI using parallel echo volumar imaging

  2008cited by this paper
• SIMULTANEOUS INFERENCE : WHEN SHOULD HYPOTHESIS TESTING PROBLEMS BE COMBINED?

  2008cited by this paper
• Resting‐state functional connectivity of the rat brain

  2008cited by this paper
• Loss of Resting Interhemispheric Functional Connectivity after Complete Section of the Corpus Callosum

  2008cited by this paper
• Distinct causal influences of parietal versus frontal areas on human visual cortex: evidence from concurrent TMS-fMRI.

  2008cited by this paper
• Regions, systems, and the brain: Hierarchical measures of functional integration in fMRI

  2008cited by this paper
• Mapping resting-state functional connectivity using perfusion MRI

  2008cited by this paper
• A BOOTSTRAP TEST TO INVESTIGATE CHANGES IN BRAIN CONNECTIVITY FOR FUNCTIONAL MRI

  2008cited by this paper
• Defining functional areas in individual human brains using resting functional connectivity MRI

  2008cited by this paper
• Normalized Cut Group Clustering of Resting-State fMRI Data

  2008cited by this paper
• Multivariate strategies in functional magnetic resonance imaging.

  2007cited by this paper
• CORSICA: correction of structured noise in fMRI by automatic identification of ICA components.

  2007cited by this paper
• Mapping the functional connectivity of anterior cingulate cortex

  2007cited by this paper
• Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?

  2007cited by this paper
• Intrinsic functional architecture in the anaesthetized monkey brain

  2007cited by this paper
• An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest

  2006cited by this paper
• Partial correlation for functional brain interactivity investigation in functional MRI

  2006cited by this paper
• A core system for the implementation of task sets.

  2006cited by this paper

• Individual identifiability following Procrustes alignment of functional gradients: effect of subspace dimensionality

  2026cites this paper
• Hierarchical maturation of structural brain connectomes from birth to childhood

  2026cites this paper
• Riemannian diffusion kernel-smoothed continuous structural connectivity on cortical surface

  2025cites this paper
• Comprehensive evaluation of pipelines for classification of psychiatric disorders using multi-site resting-state fMRI datasets

  2025cites this paper
• Atypical functional connectome is associated with low reflective functioning in incarcerated adolescents

  2025cites this paper
• Brain functional network abnormalities in Parkinson’s disease patients at different disease stages

  2025cites this paper
• Green‐to‐red spectral labeling: A novel polysynaptic retrograde tracing strategy in the marker footprint mouse model

  2025cites this paper
• Functional and Structural Network Alterations in HIV-Associated Asymptomatic Neurocognitive Disorders: Evidence for Functional Disruptions Preceding Structural Changes

  2025cites this paper
• Infant sleep state coded from respiration and its relationship to the developing functional connectome: A feasibility study

  2025cites this paper
• Microstructural alterations of the trigeminal ganglion in chronic ocular surface pain patients: A diffusion MRI study

  2025cites this paper
• Predicting Age from Brain Connectivity Matrix: A Stacked Regression Approach

  2025cites this paper
• Critical Regions and Connections Form Pathways and Clusters in the Mouse Brain

  2025cites this paper
• Review study of alteration functional activities and networks in ulcerative colitis using resting-state fMRI

  2025cites this paper
• Multi-scale atlases based hierarchical heterogeneous graph learning for brain disorder diagnosis

  2025cites this paper
• Decoding HIV-associated neurocognitive disorders: a new perspective from multimodal connectomics

  2025cites this paper
• Metabolism-weighted brain connectome reveals synaptic integration and vulnerability to neurodegeneration

  2025cites this paper
• Fetal functional connectivity prospectively associates with autistic traits in toddlerhood

  2025cites this paper
• Brain Connectivity Dynamics and Mittag-Leffler Synchronization in Asymmetric Complex Networks for a Class of Coupled Nonlinear Fractional-Order Memristive Neural Network System with Coupling Boundary Conditions

  2024cites this paper
• A Method to Estimate Longitudinal Change Patterns in Functional Network Connectivity of the Developing Brain Relevant to Psychiatric Problems, Cognition, and Age

  2024cites this paper
• Tutorial: a guide to diffusion MRI and structural connectomics

  2024cites this paper
• Systematic evaluation of fMRI data-processing pipelines for consistent functional connectomics

  2024cites this paper
• Revising clustering and small-worldness in brain networks

  2024cites this paper
• Disrupted white matter structural networks in patients with acute ischemic stroke in the right basal ganglia.

  2024cites this paper
• Translational Connectomics: overview of machine learning in macroscale Connectomics for clinical insights

  2024cites this paper
• Evolutionarily conserved fMRI network dynamics in the mouse, macaque, and human brain

  2024cites this paper
• fMRI Data to Connectivity Matrices: Building Functional Connectomes for Deep Learning Models

  2024cites this paper
• Delineating a Pathway for the Discovery of Functional Connectome Biomarkers of Autism.

  2024cites this paper
• Effects of connectivity hyperalignment (CHA) on estimated brain network properties: from coarse-scale to fine-scale

  2024cites this paper
• Subnet Communicability: Diffusive Communication Across the Brain Through a Backbone Subnetwork

  2023cites this paper
• Photoacoustic elasto-viscography and optical coherence microscopy for multi-parametric ex vivo brain imaging.

  2023cites this paper
• Abnormal and Changing Information Interaction in Adults with Attention-Deficit/Hyperactivity Disorder Based on Network Motifs

  2023cites this paper
• Disrupted white matter structural networks in individuals with alcohol dependence.

  2023cites this paper
• Groupwise structural sparsity for discriminative voxels identification

  2023cites this paper
• Identifying covariate-related subnetworks for whole-brain connectome analysis.

  2023cites this paper
• Multi-Modal Deep Learning on Imaging Genetics for Schizophrenia Classification

  2023cites this paper
• A Novel Mouse Model for Polysynaptic Retrograde Tracing and Rabies Pathological Research

  2023cites this paper
• Reduced loss aversion in value-based decision-making and edge-centric functional connectivity in patients with internet gaming disorder

  2023cites this paper
• Converging on consistent functional connectomics

  2023cites this paper
• Individual‐level brain morphological similarity networks: Current methodologies and applications

  2023cites this paper
• The Action Cycle Theory of Perception and Mental Imagery

  2023cites this paper
• Aging and Alzheimer's Disease Have Dissociable Effects on Medial Temporal Lobe Connectivity

  2023cites this paper
• Intermediately synchronised brain states optimise trade-off between subject specificity and predictive capacity

  2023cites this paper
• Aging and Alzheimer’s disease have dissociable effects on local and regional medial temporal lobe connectivity

  2023cites this paper
• A narrative review of the anatomy and function of the white matter tracts in language production and comprehension

  2023cites this paper
• Aberrant intra‐ and internetwork functional connectivity patterns of the anterior and posterior hippocampal networks in schizophrenia

  2023cites this paper
• Integrating ultrasonic neuromodulation with fiber photometry

  2023cites this paper
• Resting state functional magnetic resonance imaging: an analysis of the connectivity of brain large-scale networks

  2023cites this paper
• Introduction to correlation networks: Interdisciplinary approaches beyond thresholding.

  2023cites this paper
• Evaluating the effects of high-throughput structural neuroimaging predictors on whole-brain functional connectome outcomes via network-based matrix-on-vector regression.

  2023cites this paper
• Long-term in vitro culture of 3D brain tissue model based on chitosan thermogel

  2023cites this paper
• Seed correlation analysis based on brain region activation for ADHD diagnosis in a large-scale resting state data set

  2023cites this paper
• Network communication models narrow the gap between the modular organization of structural and functional brain networks

  2022cites this paper
• Structural Brain Network Reorganization Following Anterior Callosotomy for Colloid Cysts: Connectometry and Graph Analysis Results

  2022cites this paper
• Brain Mapping of Behavioral Domains Using Multi-Scale Networks and Canonical Correlation Analysis

  2022cites this paper
• Coregistered transcranial optoacoustic and magnetic resonance angiography of the human brain

  2022cites this paper
• From descriptive connectome to mechanistic connectome: Generative modeling in functional magnetic resonance imaging analysis

  2022cites this paper
• Brain Connectivity Based Graph Convolutional Networks and Its Application to Infant Age Prediction

  2022cites this paper
• Alteration of Neural Pathways and Its Implications in Alzheimer’s Disease

  2022cites this paper
• Resting-state network hubs are causally required in memory consolidation

  2022cites this paper
• Frontal corticostriatal functional connectivity reveals task positive and negative network dysregulation in relation to ADHD, sex, and inhibitory control

  2022cites this paper
• Diffusion magnetic resonance tractography-based evaluation of commissural fiber abnormalities in a heparan sulfate endosulfatase-deficient mouse brain.

  2022cites this paper
• Intermediately Synchronised Brain States optimise trade-off between Subject Identifiability and Predictive Capacity

  2022cites this paper
• Intrinsic macroscale oscillatory modes driving long range functional connectivity detected with ultrafast fMRI

  2022cites this paper
• The Developing Human Connectome Project Neonatal Data Release

  2022cites this paper
• Predicting multiscan MRI outcomes in children with neurodevelopmental conditions following MRI simulator training

  2021cites this paper
• Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics

  2021cites this paper
• Please provide feedback Please support the ScholarWorks@UMBC repository by emailing scholarworks-group

  2021cites this paper
• Assessment and Brain Training of Patients Experiencing Head and Facial Pain with a Distortion of Orofacial Somatorepresentation: A Narrative Review

  2021cites this paper
• Network Neuroscience Methods for Studying Intelligence

  2021cites this paper
• Graph auto-encoding brain networks with applications to analyzing large-scale brain imaging datasets

  2021cites this paper
• Optimizing network neuroscience computation of individual differences in human spontaneous brain activity for test-retest reliability

  2021influential citation
• Bundle-Specific Axon Diameter Index as a New Contrast to Differentiate White Matter Tracts

  2021cites this paper
• A Preliminary Study of Abnormal Centrality of Cortical Regions and Subsystems in Whole Brain Functional Connectivity of Autism Spectrum Disorder Boys

  2021cites this paper
• Tai Chi Chuan Alters Brain Functional Network Plasticity and Promotes Cognitive Flexibility

  2021cites this paper
• Using connectomics for predictive assessment of brain parcellations

  2021cites this paper
• Structural Brain Network Reproducibility: Influence of Different Diffusion Acquisition and Tractography Reconstruction Schemes on Graph Metrics

  2021cites this paper
• Whole Murine Brain Imaging Based on Optical Elastic Scattering.

  2021cites this paper
• Auto-encoding brain networks with applications to analyzing large-scale brain imaging datasets

  2021cites this paper
• Inter-regional BOLD signal variability is an organizational feature of functional brain networks

  2021cites this paper
• Improving stroke detection with Correlation Tensor MRI

  2021cites this paper
• Predicting multimodal MRI outcomes in children with neurodevelopmental conditions following MRI simulator training

  2021cites this paper
• Default mode network activity in depression subtypes

  2021cites this paper
• Unraveling micro-architectural modulations in neural tissue upon ischemia by Correlation Tensor MRI

  2021cites this paper
• Less Is Better: Single-Digit Brain Functional Connections Predict T2DM and T2DM-Induced Cognitive Impairment

  2021cites this paper
• A convergent structure-function substrate of cognitive imbalances in autism

  2021cites this paper
• MULTISCALE STATISTICAL HYPOTHESIS TESTING FOR K-SAMPLE GRAPH INFERENCE

  2021influential citation
• FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution

  2021cites this paper
• Disrupted morphological grey matter networks in early-stage Parkinson’s disease

  2021cites this paper
• Reorganization of brain structural networks in aging: A longitudinal study

  2021cites this paper
• A mathematical perspective on edge-centric brain functional connectivity

  2021cites this paper
• Multimodal Classification of Mild Traumatic Brain Injury Reveals Local Coupling Between Structural and Functional Connectomes

  2021cites this paper
• Correlation Tensor MRI deciphers underlying kurtosis sources in stroke

  2021cites this paper
• High-Throughput Strategy for Profiling Sequential Section With Multiplex Staining of Mouse Brain

  2021cites this paper
• Characterization of whole‐brain task‐modulated functional connectivity in response to nociceptive pain: A multisensory comparison study

  2021cites this paper
• Tractography methods and findings in brain tumors and traumatic brain injury

  2021cites this paper
• Structural connectomics: Where we are and where we should be?

  2021cites this paper
• Mapping Structural Connectivity Using Diffusion MRI: Challenges and Opportunities

  2020cites this paper
• Bayesian Methods in Brain Networks

  2020cites this paper
• Neuronal classification from network connectivity via adjacency spectral embedding

  2020cites this paper
• The diversity and multiplexity of edge communities within and between brain systems

  2020cites this paper