Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

Diego Martínez,L. Larrondo,N. Putnam,N. Putnam,M. Gelpke,Katherine H. Huang,Jarrod Chapman,Jarrod Chapman,Kevin G. Helfenbein,Preethi Ramaiya,J. Detter,F. Larimer,P. Coutinho,B. Henrissat,R. Berka,D. Cullen,D. Rokhsar

Published 2004 in Nature Biotechnology

ABSTRACT

White rot fungi efficiently degrade lignin, a complex aromatic polymer in wood that is among the most abundant natural materials on earth. These fungi use extracellular oxidative enzymes that are also able to transform related aromatic compounds found in explosive contaminants, pesticides and toxic waste. We have sequenced the 30-million base-pair genome of Phanerochaete chrysosporium strain RP78 using a whole genome shotgun approach. The P. chrysosporium genome reveals an impressive array of genes encoding secreted oxidases, peroxidases and hydrolytic enzymes that cooperate in wood decay. Analysis of the genome data will enhance our understanding of lignocellulose degradation, a pivotal process in the global carbon cycle, and provide a framework for further development of bioprocesses for biomass utilization, organopollutant degradation and fiber bleaching. This genome provides a high quality draft sequence of a basidiomycete, a major fungal phylum that includes important plant and animal pathogens.

PUBLICATION RECORD

  • Publication year

    2004

  • Venue

    Nature Biotechnology

  • Publication date

    2004-07-01

  • Fields of study

    Biology, Medicine, Materials Science, Environmental Science

  • Identifiers
  • External record

    Open on Semantic Scholar

  • Source metadata

    Semantic Scholar, PubMed

CITATION MAP

EXTRACTION MAP

CLAIMS

  • No claims are published for this paper.

CONCEPTS

  • No concepts are published for this paper.

REFERENCES

Showing 1-49 of 49 references · Page 1 of 1

CITED BY

Showing 1-100 of 952 citing papers · Page 1 of 10